RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 DNAAF1Q8NEP3 725 aa9.72□□□□□ -0.85
HDAC3-204ENST00000469207 OR2G2Q8NGZ5 317 aa9.72□□□□□ -0.85
HDAC3-204ENST00000469207 PP6455Q8WZ26 134 aa9.72□□□□□ -0.85
HDAC3-204ENST00000469207 AKR1E2Q96JD6 320 aa9.72□□□□□ -0.85
HDAC3-204ENST00000469207 DUX3Q96PT4 197 aa9.72□□□□□ -0.85
HDAC3-204ENST00000469207 CIB1Q99828 191 aa9.72□□□□□ -0.85
HDAC3-204ENST00000469207 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.72□□□□□ -0.85
HDAC3-204ENST00000469207 GLS2Q9UI32 602 aa9.72□□□□□ -0.85
HDAC3-204ENST00000469207 ODAMA1E959 279 aa9.71□□□□□ -0.86
HDAC3-204ENST00000469207 PSMB11A5LHX3 300 aa9.71□□□□□ -0.86
HDAC3-204ENST00000469207 SLC33A1O00400 549 aaPredicted RBP9.71□□□□□ -0.86
HDAC3-204ENST00000469207 HSPB6O14558 160 aa9.71□□□□□ -0.86
HDAC3-204ENST00000469207 KDM4BO94953 1096 aa9.71□□□□□ -0.86
HDAC3-204ENST00000469207 HOXB6P17509 224 aaKnown RBP9.71□□□□□ -0.86
HDAC3-204ENST00000469207 THBS3P49746 956 aa9.71□□□□□ -0.86
HDAC3-204ENST00000469207 CDC42P60953 191 aa9.71□□□□□ -0.86
HDAC3-204ENST00000469207 CD69Q07108 199 aa9.71□□□□□ -0.86
HDAC3-204ENST00000469207 CDK5R1Q15078 307 aa9.71□□□□□ -0.86
HDAC3-204ENST00000469207 ATP6AP1Q15904 470 aa9.71□□□□□ -0.86
HDAC3-204ENST00000469207 LTC4SQ16873 150 aa9.71□□□□□ -0.86
HDAC3-204ENST00000469207 C8orf86Q6ZUL3 223 aa9.71□□□□□ -0.86
HDAC3-204ENST00000469207 OSR2Q8N2R0 312 aa9.71□□□□□ -0.86
HDAC3-204ENST00000469207 OR13C9Q8NGT0 318 aa9.71□□□□□ -0.86
HDAC3-204ENST00000469207 OPALINQ96PE5 141 aa9.71□□□□□ -0.86
HDAC3-204ENST00000469207 GAL3ST2Q9H3Q3 398 aa9.71□□□□□ -0.86
HDAC3-204ENST00000469207 TAS2R3Q9NYW6 316 aa9.71□□□□□ -0.86
HDAC3-204ENST00000469207 AASSQ9UDR5 926 aa9.71□□□□□ -0.86
HDAC3-204ENST00000469207 TRAV39A0A0B4J263 110 aa9.7□□□□□ -0.86
HDAC3-204ENST00000469207 A0A1W2PPE3 182 aa9.7□□□□□ -0.86
HDAC3-204ENST00000469207 FAM90A18PA6NE21 464 aa9.7□□□□□ -0.86
HDAC3-204ENST00000469207 FAM90A16PA6NEW6 464 aa9.7□□□□□ -0.86
HDAC3-204ENST00000469207 FAM90A20PA6NIJ5 464 aa9.7□□□□□ -0.86
HDAC3-204ENST00000469207 FAM90A9PA6NNJ1 464 aa9.7□□□□□ -0.86
HDAC3-204ENST00000469207 FAM90A12PA8MX19 464 aa9.7□□□□□ -0.86
HDAC3-204ENST00000469207 FAM90A5PA8MXJ8 464 aa9.7□□□□□ -0.86
HDAC3-204ENST00000469207 DEGS1O15121 323 aa9.7□□□□□ -0.86
HDAC3-204ENST00000469207 FAM90A15PP0C7V4 464 aa9.7□□□□□ -0.86
HDAC3-204ENST00000469207 FAM90A13PP0C7W8 464 aa9.7□□□□□ -0.86
HDAC3-204ENST00000469207 FAM90A14PP0C7W9 464 aa9.7□□□□□ -0.86
HDAC3-204ENST00000469207 FAM90A24PP0C7X0 464 aa9.7□□□□□ -0.86
HDAC3-204ENST00000469207 UBCP0CG48 685 aaKnown RBP9.7□□□□□ -0.86
HDAC3-204ENST00000469207 CGB3P0DN86 165 aa9.7□□□□□ -0.86
HDAC3-204ENST00000469207 CGB7P0DN87 165 aa9.7□□□□□ -0.86
HDAC3-204ENST00000469207 ZNF20P17024 532 aa9.7□□□□□ -0.86
HDAC3-204ENST00000469207 PRKACBP22694 351 aa9.7□□□□□ -0.86
HDAC3-204ENST00000469207 CD34P28906 385 aa9.7□□□□□ -0.86
HDAC3-204ENST00000469207 PTGFRP43088 359 aa9.7□□□□□ -0.86
HDAC3-204ENST00000469207 PRRX1P54821 245 aa9.7□□□□□ -0.86
HDAC3-204ENST00000469207 DNAL1Q4LDG9 190 aa9.7□□□□□ -0.86
HDAC3-204ENST00000469207 TMEM244Q5VVB8 128 aa9.7□□□□□ -0.86
HDAC3-204ENST00000469207 LHFPL2Q6ZUX7 228 aa9.7□□□□□ -0.86
HDAC3-204ENST00000469207 UTS2BQ765I0 119 aa9.7□□□□□ -0.86
HDAC3-204ENST00000469207 DRAM1Q8N682 238 aa9.7□□□□□ -0.86
HDAC3-204ENST00000469207 CCDC54Q8NEL0 328 aa9.7□□□□□ -0.86
HDAC3-204ENST00000469207 OR4D6Q8NGJ1 314 aa9.7□□□□□ -0.86
HDAC3-204ENST00000469207 OR13A1Q8NGR1 328 aa9.7□□□□□ -0.86
HDAC3-204ENST00000469207 OR56B4Q8NH76 319 aa9.7□□□□□ -0.86
HDAC3-204ENST00000469207 RFESDQ8TAC1 157 aa9.7□□□□□ -0.86
HDAC3-204ENST00000469207 C10orf35Q96D05 121 aa9.7□□□□□ -0.86
HDAC3-204ENST00000469207 KIRREL1Q96J84 757 aa9.7□□□□□ -0.86
HDAC3-204ENST00000469207 HRASLS5Q96KN8 279 aa9.7□□□□□ -0.86
HDAC3-204ENST00000469207 NR1H4Q96RI1 486 aaPredicted RBP9.7□□□□□ -0.86
HDAC3-204ENST00000469207 COMMD4Q9H0A8 199 aa9.7□□□□□ -0.86
HDAC3-204ENST00000469207 RIBC2Q9H4K1 309 aa9.7□□□□□ -0.86
HDAC3-204ENST00000469207 DUS4LO95620 317 aaKnown RBP9.69□□□□□ -0.86
HDAC3-204ENST00000469207 CLIC3O95833 236 aa9.69□□□□□ -0.86
HDAC3-204ENST00000469207 OCM2P0CE71 109 aa9.69□□□□□ -0.86
HDAC3-204ENST00000469207 OCMP0CE72 109 aaPredicted RBP9.69□□□□□ -0.86
HDAC3-204ENST00000469207 CEACAM3P40198 252 aa9.69□□□□□ -0.86
HDAC3-204ENST00000469207 MNDAP41218 407 aa9.69□□□□□ -0.86
HDAC3-204ENST00000469207 RPL23AP62750 156 aaKnown RBP9.69□□□□□ -0.86
HDAC3-204ENST00000469207 HES1Q14469 280 aa9.69□□□□□ -0.86
HDAC3-204ENST00000469207 LCNL1Q6ZST4 164 aa9.69□□□□□ -0.86
HDAC3-204ENST00000469207 OR2W3Q7Z3T1 314 aa9.69□□□□□ -0.86
HDAC3-204ENST00000469207 FAM220AQ7Z4H9 259 aa9.69□□□□□ -0.86
HDAC3-204ENST00000469207 ZDHHC13Q8IUH4 622 aa9.69□□□□□ -0.86
HDAC3-204ENST00000469207 MBOAT4Q96T53 435 aa9.69□□□□□ -0.86
HDAC3-204ENST00000469207 B9D2Q9BPU9 175 aa9.69□□□□□ -0.86
HDAC3-204ENST00000469207 GABARAPL1Q9H0R8 117 aa9.69□□□□□ -0.86
HDAC3-204ENST00000469207 NEK6Q9HC98 313 aa9.69□□□□□ -0.86
HDAC3-204ENST00000469207 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.69□□□□□ -0.86
HDAC3-204ENST00000469207 ZNF581Q9P0T4 197 aa9.69□□□□□ -0.86
HDAC3-204ENST00000469207 A0A087X0M5 115 aa9.68□□□□□ -0.86
HDAC3-204ENST00000469207 KBTBD11-OT1A0A1B0GTJ5 212 aa9.68□□□□□ -0.86
HDAC3-204ENST00000469207 A0A1B0GX30 115 aa9.68□□□□□ -0.86
HDAC3-204ENST00000469207 FUOMA2VDF0 154 aa9.68□□□□□ -0.86
HDAC3-204ENST00000469207 ZNF729A6NN14 1252 aaPredicted RBP9.68□□□□□ -0.86
HDAC3-204ENST00000469207 J3QLW9 94 aa9.68□□□□□ -0.86
HDAC3-204ENST00000469207 J3QR06 171 aa9.68□□□□□ -0.86
HDAC3-204ENST00000469207 J3QRE1 110 aa9.68□□□□□ -0.86
HDAC3-204ENST00000469207 ISG15P05161 165 aa9.68□□□□□ -0.86
HDAC3-204ENST00000469207 FAM106CPP0CH98 169 aa9.68□□□□□ -0.86
HDAC3-204ENST00000469207 TMEM225BP0DP42 221 aa9.68□□□□□ -0.86
HDAC3-204ENST00000469207 ZNF19P17023 458 aa9.68□□□□□ -0.86
HDAC3-204ENST00000469207 FASP25445 335 aa9.68□□□□□ -0.86
HDAC3-204ENST00000469207 GNG10P50151 68 aa9.68□□□□□ -0.86
HDAC3-204ENST00000469207 FAM53AQ6NSI3 398 aaPredicted RBP9.68□□□□□ -0.86
HDAC3-204ENST00000469207 THNSL2Q86YJ6 484 aa9.68□□□□□ -0.86
HDAC3-204ENST00000469207 C5orf56Q8N8D9 126 aa9.68□□□□□ -0.86
HDAC3-204ENST00000469207 OR8J1Q8NGP2 316 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms