RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 TRAPPC2LH3BP13 241 aa12.07□□□□□ -0.48
COL27A1-203ENST00000468565 PRAF2O60831 178 aa12.07□□□□□ -0.48
COL27A1-203ENST00000468565 FSHBP01225 129 aa12.07□□□□□ -0.48
COL27A1-203ENST00000468565 ISG15P05161 165 aa12.07□□□□□ -0.48
COL27A1-203ENST00000468565 ZNF154Q13106 437 aa12.07□□□□□ -0.48
COL27A1-203ENST00000468565 GFOD2Q3B7J2 385 aa12.07□□□□□ -0.48
COL27A1-203ENST00000468565 DEFB108BQ8NET1 73 aa12.07□□□□□ -0.48
COL27A1-203ENST00000468565 OR51D1Q8NGF3 324 aa12.07□□□□□ -0.48
COL27A1-203ENST00000468565 OR8B12Q8NGG6 310 aa12.07□□□□□ -0.48
COL27A1-203ENST00000468565 OR8B3Q8NGG8 313 aa12.07□□□□□ -0.48
COL27A1-203ENST00000468565 DEDD2Q8WXF8 326 aa12.07□□□□□ -0.48
COL27A1-203ENST00000468565 PPP1R14AQ96A00 147 aa12.07□□□□□ -0.48
COL27A1-203ENST00000468565 DACT3Q96B18 629 aaPredicted RBP12.07□□□□□ -0.48
COL27A1-203ENST00000468565 FAM3DQ96BQ1 224 aa12.07□□□□□ -0.48
COL27A1-203ENST00000468565 OR8B2Q96RD0 313 aa12.07□□□□□ -0.48
COL27A1-203ENST00000468565 C20orf85Q9H1P6 137 aa12.07□□□□□ -0.48
COL27A1-203ENST00000468565 MMP26Q9NRE1 261 aa12.07□□□□□ -0.48
COL27A1-203ENST00000468565 ING4Q9UNL4 249 aa12.07□□□□□ -0.48
COL27A1-203ENST00000468565 TMEM269A0A1B0GVZ9 245 aa12.06□□□□□ -0.48
COL27A1-203ENST00000468565 PEX14O75381 377 aa12.06□□□□□ -0.48
COL27A1-203ENST00000468565 UBCP0CG48 685 aaKnown RBP12.06□□□□□ -0.48
COL27A1-203ENST00000468565 IGFBP3P17936 291 aaPredicted RBP12.06□□□□□ -0.48
COL27A1-203ENST00000468565 EPHA1P21709 976 aa12.06□□□□□ -0.48
COL27A1-203ENST00000468565 FAUP35544 74 aaKnown RBP12.06□□□□□ -0.48
COL27A1-203ENST00000468565 POU3F4P49335 361 aa12.06□□□□□ -0.48
COL27A1-203ENST00000468565 GNB2P62879 340 aa12.06□□□□□ -0.48
COL27A1-203ENST00000468565 GIMAP1Q8WWP7 306 aa12.06□□□□□ -0.48
COL27A1-203ENST00000468565 GCDHQ92947 438 aaPredicted RBP12.06□□□□□ -0.48
COL27A1-203ENST00000468565 HYLS1Q96M11 299 aa12.06□□□□□ -0.48
COL27A1-203ENST00000468565 PLSCR3Q9NRY6 295 aa12.06□□□□□ -0.48
COL27A1-203ENST00000468565 C1orf123Q9NWV4 160 aa12.06□□□□□ -0.48
COL27A1-203ENST00000468565 FAM206AQ9NX38 181 aa12.06□□□□□ -0.48
COL27A1-203ENST00000468565 TAS2R8Q9NYW2 309 aa12.06□□□□□ -0.48
COL27A1-203ENST00000468565 TAS2R4Q9NYW5 299 aa12.06□□□□□ -0.48
COL27A1-203ENST00000468565 ZNF222Q9UK12 451 aa12.06□□□□□ -0.48
COL27A1-203ENST00000468565 MPC1Q9Y5U8 109 aa12.06□□□□□ -0.48
COL27A1-203ENST00000468565 A0A0U1RQV5 110 aa12.05□□□□□ -0.48
COL27A1-203ENST00000468565 LOC107986453A0A1B0GWG9 222 aa12.05□□□□□ -0.48
COL27A1-203ENST00000468565 LGALS8O00214 317 aa12.05□□□□□ -0.48
COL27A1-203ENST00000468565 RBBP9O75884 186 aa12.05□□□□□ -0.48
COL27A1-203ENST00000468565 GRPP07492 148 aa12.05□□□□□ -0.48
COL27A1-203ENST00000468565 ANXA3P12429 323 aa12.05□□□□□ -0.48
COL27A1-203ENST00000468565 PRKACBP22694 351 aa12.05□□□□□ -0.48
COL27A1-203ENST00000468565 GNALP38405 381 aa12.05□□□□□ -0.48
COL27A1-203ENST00000468565 C2orf76Q3KRA6 126 aa12.05□□□□□ -0.48
COL27A1-203ENST00000468565 SFRP4Q6FHJ7 346 aaPredicted RBP12.05□□□□□ -0.48
COL27A1-203ENST00000468565 LYZL4Q96KX0 146 aa12.05□□□□□ -0.48
COL27A1-203ENST00000468565 PAPOLGQ9BWT3 736 aaKnown RBP12.05□□□□□ -0.48
COL27A1-203ENST00000468565 GON7Q9BXV9 100 aa12.05□□□□□ -0.48
COL27A1-203ENST00000468565 KLK11Q9UBX7 282 aa12.05□□□□□ -0.48
COL27A1-203ENST00000468565 RHBDD3Q9Y3P4 386 aa12.05□□□□□ -0.48
COL27A1-203ENST00000468565 A6NLC8 198 aa12.05□□□□□ -0.48
COL27A1-203ENST00000468565 CST4P01036 141 aa12.05□□□□□ -0.48
COL27A1-203ENST00000468565 LHBP01229 141 aa12.05□□□□□ -0.48
COL27A1-203ENST00000468565 SRSF2Q01130 221 aaKnown RBP12.05□□□□□ -0.48
COL27A1-203ENST00000468565 PAX2Q02962 417 aa12.05□□□□□ -0.48
COL27A1-203ENST00000468565 WDR86Q86TI4 376 aa12.05□□□□□ -0.48
COL27A1-203ENST00000468565 GCSAMQ8N6F7 178 aa12.05□□□□□ -0.48
COL27A1-203ENST00000468565 OR1M1Q8NGA1 313 aa12.05□□□□□ -0.48
COL27A1-203ENST00000468565 OR6M1Q8NGM8 313 aa12.05□□□□□ -0.48
COL27A1-203ENST00000468565 ZNF418Q8TF45 676 aaPredicted RBP12.05□□□□□ -0.48
COL27A1-203ENST00000468565 AUP1Q9Y679 476 aa12.05□□□□□ -0.48
COL27A1-203ENST00000468565 TRAV38-1A0A0B4J264 116 aa12.04□□□□□ -0.48
COL27A1-203ENST00000468565 OOEPA6NGQ2 149 aa12.04□□□□□ -0.48
COL27A1-203ENST00000468565 NDUFA2O43678 99 aa12.04□□□□□ -0.48
COL27A1-203ENST00000468565 CSF1P09603 554 aa12.04□□□□□ -0.48
COL27A1-203ENST00000468565 ACKR3P25106 362 aa12.04□□□□□ -0.48
COL27A1-203ENST00000468565 HTR2CP28335 458 aa12.04□□□□□ -0.48
COL27A1-203ENST00000468565 NPY4RP50391 375 aa12.04□□□□□ -0.48
COL27A1-203ENST00000468565 CAPZA1P52907 286 aa12.04□□□□□ -0.48
COL27A1-203ENST00000468565 PAX8Q06710 450 aa12.04□□□□□ -0.48
COL27A1-203ENST00000468565 LYPD2Q6UXB3 125 aa12.04□□□□□ -0.48
COL27A1-203ENST00000468565 ZNF826PQ6ZT77 177 aa12.04□□□□□ -0.48
COL27A1-203ENST00000468565 C11orf53Q8IXP5 236 aa12.04□□□□□ -0.48
COL27A1-203ENST00000468565 NKAIN3Q8N8D7 197 aa12.04□□□□□ -0.48
COL27A1-203ENST00000468565 OR11H7Q8NGC8 314 aa12.04□□□□□ -0.48
COL27A1-203ENST00000468565 MICU1Q9BPX6 476 aa12.04□□□□□ -0.48
COL27A1-203ENST00000468565 C19orf24Q9BVV8 132 aa12.04□□□□□ -0.48
COL27A1-203ENST00000468565 TLNRD1Q9H1K6 362 aa12.04□□□□□ -0.48
COL27A1-203ENST00000468565 RANBP3Q9H6Z4 567 aaPredicted RBP12.04□□□□□ -0.48
COL27A1-203ENST00000468565 CLN8Q9UBY8 286 aa12.04□□□□□ -0.48
COL27A1-203ENST00000468565 MTFP1Q9UDX5 166 aa12.04□□□□□ -0.48
COL27A1-203ENST00000468565 TMA7Q9Y2S6 64 aaKnown RBP12.04□□□□□ -0.48
COL27A1-203ENST00000468565 IGHV2-70DA0A0C4DH43 119 aa12.03□□□□□ -0.48
COL27A1-203ENST00000468565 TMEM272A0A1B0GTI8 110 aa12.03□□□□□ -0.48
COL27A1-203ENST00000468565 A0A1B0GVI7 797 aa12.03□□□□□ -0.48
COL27A1-203ENST00000468565 hCG_1807616A0A1W2PRN6 198 aa12.03□□□□□ -0.48
COL27A1-203ENST00000468565 TNFRSF13BO14836 293 aaPredicted RBP12.03□□□□□ -0.48
COL27A1-203ENST00000468565 SSNA1O43805 119 aa12.03□□□□□ -0.48
COL27A1-203ENST00000468565 IGLV3-1P01715 115 aa12.03□□□□□ -0.48
COL27A1-203ENST00000468565 PPIAL4GP0DN37 164 aa12.03□□□□□ -0.48
COL27A1-203ENST00000468565 CD37P11049 281 aa12.03□□□□□ -0.48
COL27A1-203ENST00000468565 CD80P33681 288 aa12.03□□□□□ -0.48
COL27A1-203ENST00000468565 PLA2G7Q13093 441 aa12.03□□□□□ -0.48
COL27A1-203ENST00000468565 METTL11BQ5VVY1 283 aa12.03□□□□□ -0.48
COL27A1-203ENST00000468565 TEX36Q5VZQ5 186 aa12.03□□□□□ -0.48
COL27A1-203ENST00000468565 WDR25Q64LD2 544 aaPredicted RBP12.03□□□□□ -0.48
COL27A1-203ENST00000468565 ASPHD2Q6ICH7 369 aa12.03□□□□□ -0.48
COL27A1-203ENST00000468565 BTNL3Q6UXE8 466 aa12.03□□□□□ -0.48
COL27A1-203ENST00000468565 ZNF841Q6ZN19 808 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms