RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 GHITMQ9H3K2 345 aa17.36■□□□□ 0.37
TMEM53-207ENST00000468117 CHMP1AQ9HD42 196 aaPredicted RBP17.36■□□□□ 0.37
TMEM53-207ENST00000468117 ANXA10Q9UJ72 324 aa17.36■□□□□ 0.37
TMEM53-207ENST00000468117 EDARQ9UNE0 448 aa17.36■□□□□ 0.37
TMEM53-207ENST00000468117 CLDN14O95500 239 aa17.35■□□□□ 0.37
TMEM53-207ENST00000468117 PRB1P04280 392 aa17.35■□□□□ 0.37
TMEM53-207ENST00000468117 HNRNPCP07910 306 aaKnown RBP eCLIP17.35■□□□□ 0.37
TMEM53-207ENST00000468117 FIP1L1Q6UN15 594 aaKnown RBP17.35■□□□□ 0.37
TMEM53-207ENST00000468117 ZCCHC24Q8N2G6 241 aaKnown RBP17.35■□□□□ 0.37
TMEM53-207ENST00000468117 SLC25A21Q9BQT8 299 aaPredicted RBP17.35■□□□□ 0.37
TMEM53-207ENST00000468117 EHFQ9NZC4 300 aa17.35■□□□□ 0.37
TMEM53-207ENST00000468117 IL19Q9UHD0 177 aa17.35■□□□□ 0.37
TMEM53-207ENST00000468117 RNF115Q9Y4L5 304 aa17.35■□□□□ 0.37
TMEM53-207ENST00000468117 OR2AT4A6NND4 320 aa17.35■□□□□ 0.37
TMEM53-207ENST00000468117 VSTM5A8MXK1 200 aa17.35■□□□□ 0.37
TMEM53-207ENST00000468117 SLC33A1O00400 549 aaPredicted RBP17.35■□□□□ 0.37
TMEM53-207ENST00000468117 SH2D1BO14796 132 aa17.35■□□□□ 0.37
TMEM53-207ENST00000468117 ARPC4P59998 168 aa17.35■□□□□ 0.37
TMEM53-207ENST00000468117 TSPAN5P62079 268 aa17.35■□□□□ 0.37
TMEM53-207ENST00000468117 FN3KRPQ9HA64 309 aa17.35■□□□□ 0.37
TMEM53-207ENST00000468117 ETAA1Q9NY74 926 aa17.35■□□□□ 0.37
TMEM53-207ENST00000468117 KIAA2026Q5HYC2 2103 aa17.34■□□□□ 0.37
TMEM53-207ENST00000468117 HMX3A6NHT5 357 aa17.34■□□□□ 0.37
TMEM53-207ENST00000468117 BOLA2-SMG1P6H3BVE0 249 aa17.34■□□□□ 0.37
TMEM53-207ENST00000468117 HAND1O96004 215 aa17.34■□□□□ 0.37
TMEM53-207ENST00000468117 NAPSAO96009 420 aa17.34■□□□□ 0.37
TMEM53-207ENST00000468117 EGR1P18146 543 aa17.34■□□□□ 0.37
TMEM53-207ENST00000468117 ZMYND11Q15326 602 aa17.34■□□□□ 0.37
TMEM53-207ENST00000468117 PAN3Q58A45 887 aaKnown RBP17.34■□□□□ 0.37
TMEM53-207ENST00000468117 OVCH2Q7RTZ1 564 aa17.34■□□□□ 0.37
TMEM53-207ENST00000468117 ARRDC1Q8N5I2 433 aa17.34■□□□□ 0.37
TMEM53-207ENST00000468117 PPA2Q9H2U2 334 aa17.34■□□□□ 0.37
TMEM53-207ENST00000468117 TFF1P04155 84 aa17.33■□□□□ 0.37
TMEM53-207ENST00000468117 TNFSF4P23510 183 aa17.33■□□□□ 0.37
TMEM53-207ENST00000468117 GATA4P43694 442 aa17.33■□□□□ 0.37
TMEM53-207ENST00000468117 RBM39Q14498 530 aaKnown RBP17.33■□□□□ 0.37
TMEM53-207ENST00000468117 SMIM21Q3B7S5 101 aa17.33■□□□□ 0.37
TMEM53-207ENST00000468117 ZNF808Q8N4W9 903 aaPredicted RBP17.33■□□□□ 0.37
TMEM53-207ENST00000468117 BOLLQ8N9W6 283 aaKnown RBP17.33■□□□□ 0.37
TMEM53-207ENST00000468117 GCM1Q9NP62 436 aa17.33■□□□□ 0.37
TMEM53-207ENST00000468117 ING3Q9NXR8 418 aa17.33■□□□□ 0.37
TMEM53-207ENST00000468117 C17orf100A8MU93 164 aa17.33■□□□□ 0.36
TMEM53-207ENST00000468117 DEFB108AA8MXU0 73 aa17.33■□□□□ 0.36
TMEM53-207ENST00000468117 SRRM5B3KS81 715 aa17.33■□□□□ 0.36
TMEM53-207ENST00000468117 M0R233 179 aa17.33■□□□□ 0.36
TMEM53-207ENST00000468117 CCNKO75909 580 aa17.33■□□□□ 0.36
TMEM53-207ENST00000468117 HPXP02790 462 aa17.33■□□□□ 0.36
TMEM53-207ENST00000468117 MECP2P51608 486 aaKnown RBP17.33■□□□□ 0.36
TMEM53-207ENST00000468117 CCL8P80075 99 aa17.33■□□□□ 0.36
TMEM53-207ENST00000468117 CDK10Q15131 360 aa17.33■□□□□ 0.36
TMEM53-207ENST00000468117 GCSAMQ8N6F7 178 aa17.33■□□□□ 0.36
TMEM53-207ENST00000468117 PPP1R14BQ96C90 147 aa17.33■□□□□ 0.36
TMEM53-207ENST00000468117 PIK3IP1Q96FE7 263 aa17.33■□□□□ 0.36
TMEM53-207ENST00000468117 SEC22CQ9BRL7 303 aa17.33■□□□□ 0.36
TMEM53-207ENST00000468117 OR51J1Q9H342 316 aa17.33■□□□□ 0.36
TMEM53-207ENST00000468117 ZNF286AQ9HBT8 521 aa17.33■□□□□ 0.36
TMEM53-207ENST00000468117 TMEM82A0PJX8 343 aa17.32■□□□□ 0.36
TMEM53-207ENST00000468117 A8MV72 311 aaPredicted RBP17.32■□□□□ 0.36
TMEM53-207ENST00000468117 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.32■□□□□ 0.36
TMEM53-207ENST00000468117 GLAP06280 429 aa17.32■□□□□ 0.36
TMEM53-207ENST00000468117 VSIG10L2P0DP72 767 aa17.32■□□□□ 0.36
TMEM53-207ENST00000468117 CFHR2P36980 270 aa17.32■□□□□ 0.36
TMEM53-207ENST00000468117 RRAS2P62070 204 aaPredicted RBP17.32■□□□□ 0.36
TMEM53-207ENST00000468117 ATPAF1Q5TC12 328 aaPredicted RBP17.32■□□□□ 0.36
TMEM53-207ENST00000468117 C20orf204Q6ZNR8 217 aa17.32■□□□□ 0.36
TMEM53-207ENST00000468117 TMED4Q7Z7H5 227 aa17.32■□□□□ 0.36
TMEM53-207ENST00000468117 OR5T2Q8NGG2 359 aa17.32■□□□□ 0.36
TMEM53-207ENST00000468117 OR10Z1Q8NGY1 313 aa17.32■□□□□ 0.36
TMEM53-207ENST00000468117 LILRB1Q8NHL6 650 aaPredicted RBP17.32■□□□□ 0.36
TMEM53-207ENST00000468117 TERB2Q8NHR7 220 aa17.32■□□□□ 0.36
TMEM53-207ENST00000468117 CISD1Q9NZ45 108 aaKnown RBP17.32■□□□□ 0.36
TMEM53-207ENST00000468117 TREM2Q9NZC2 230 aa17.32■□□□□ 0.36
TMEM53-207ENST00000468117 VSIG4Q9Y279 399 aa17.32■□□□□ 0.36
TMEM53-207ENST00000468117 DSCAMO60469 2012 aa17.32■□□□□ 0.36
TMEM53-207ENST00000468117 MYO18BQ8IUG5 2567 aa17.32■□□□□ 0.36
TMEM53-207ENST00000468117 RFPL4AA6NLU0 287 aa17.31■□□□□ 0.36
TMEM53-207ENST00000468117 RFPL4AL1F8VTS6 287 aa17.31■□□□□ 0.36
TMEM53-207ENST00000468117 PRAF2O60831 178 aa17.31■□□□□ 0.36
TMEM53-207ENST00000468117 AGAP20933 346 aa17.31■□□□□ 0.36
TMEM53-207ENST00000468117 APOBEC3AP31941 199 aaPredicted RBP17.31■□□□□ 0.36
TMEM53-207ENST00000468117 GLDNQ6ZMI3 551 aaPredicted RBP17.31■□□□□ 0.36
TMEM53-207ENST00000468117 C17orf107Q6ZR85 190 aa17.31■□□□□ 0.36
TMEM53-207ENST00000468117 SLC36A1Q7Z2H8 476 aa17.31■□□□□ 0.36
TMEM53-207ENST00000468117 CAPSLQ8WWF8 208 aa17.31■□□□□ 0.36
TMEM53-207ENST00000468117 TMEM165Q9HC07 324 aa17.31■□□□□ 0.36
TMEM53-207ENST00000468117 GLS2Q9UI32 602 aa17.31■□□□□ 0.36
TMEM53-207ENST00000468117 PSPNO60542 156 aa17.31■□□□□ 0.36
TMEM53-207ENST00000468117 KNG1P01042 644 aa17.31■□□□□ 0.36
TMEM53-207ENST00000468117 LOXP28300 417 aaPredicted RBP17.31■□□□□ 0.36
TMEM53-207ENST00000468117 ATXN7L3Q14CW9 347 aaPredicted RBP17.31■□□□□ 0.36
TMEM53-207ENST00000468117 C5orf24Q7Z6I8 188 aa17.31■□□□□ 0.36
TMEM53-207ENST00000468117 TMEM17Q86X19 198 aa17.31■□□□□ 0.36
TMEM53-207ENST00000468117 MRPL30Q8TCC3 161 aaKnown RBP17.31■□□□□ 0.36
TMEM53-207ENST00000468117 MARCH1Q8TCQ1 289 aa17.31■□□□□ 0.36
TMEM53-207ENST00000468117 Q9N2K0 584 aa17.31■□□□□ 0.36
TMEM53-207ENST00000468117 ZNF462Q96JM2 2506 aa17.31■□□□□ 0.36
TMEM53-207ENST00000468117 ZNF205O95201 554 aa17.3■□□□□ 0.36
TMEM53-207ENST00000468117 GSTT2P0CG29 244 aa17.3■□□□□ 0.36
TMEM53-207ENST00000468117 TRAPPC2P0DI81 140 aa17.3■□□□□ 0.36
TMEM53-207ENST00000468117 TRAPPC2BP0DI82 140 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms