RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 ODAMA1E959 279 aa7.82□□□□□ -1.16
HDAC3-203ENST00000467533 G3V318 75 aa7.82□□□□□ -1.16
HDAC3-203ENST00000467533 H0Y980 276 aa7.82□□□□□ -1.16
HDAC3-203ENST00000467533 DLGAP1O14490 977 aa7.82□□□□□ -1.16
HDAC3-203ENST00000467533 CNIH1O95406 144 aa7.82□□□□□ -1.16
HDAC3-203ENST00000467533 IFNGP01579 166 aa7.82□□□□□ -1.16
HDAC3-203ENST00000467533 IGLV1-40P01703 118 aa7.82□□□□□ -1.16
HDAC3-203ENST00000467533 PPIFP30405 207 aaKnown RBP7.82□□□□□ -1.16
HDAC3-203ENST00000467533 SMIM11AP58511 58 aa7.82□□□□□ -1.16
HDAC3-203ENST00000467533 BNIP1Q12981 228 aa7.82□□□□□ -1.16
HDAC3-203ENST00000467533 COQ5Q5HYK3 327 aa7.82□□□□□ -1.16
HDAC3-203ENST00000467533 OR8D4Q8NGM9 314 aa7.82□□□□□ -1.16
HDAC3-203ENST00000467533 OR10X1Q8NGY0 326 aa7.82□□□□□ -1.16
HDAC3-203ENST00000467533 OTOSQ8NHW6 89 aa7.82□□□□□ -1.16
HDAC3-203ENST00000467533 FLYWCH2Q96CP2 140 aaKnown RBP7.82□□□□□ -1.16
HDAC3-203ENST00000467533 TEAD3Q99594 435 aa7.82□□□□□ -1.16
HDAC3-203ENST00000467533 PBOV1Q9GZY1 135 aa7.82□□□□□ -1.16
HDAC3-203ENST00000467533 MED20Q9H944 212 aa7.82□□□□□ -1.16
HDAC3-203ENST00000467533 GID8Q9NWU2 228 aa7.82□□□□□ -1.16
HDAC3-203ENST00000467533 FAM206AQ9NX38 181 aa7.82□□□□□ -1.16
HDAC3-203ENST00000467533 SIGLEC8Q9NYZ4 499 aa7.82□□□□□ -1.16
HDAC3-203ENST00000467533 OR6C3Q9NZP0 311 aa7.82□□□□□ -1.16
HDAC3-203ENST00000467533 COPS3Q9UNS2 423 aa7.82□□□□□ -1.16
HDAC3-203ENST00000467533 TMEM269A0A1B0GVZ9 245 aa7.81□□□□□ -1.16
HDAC3-203ENST00000467533 A6NIN4 97 aa7.81□□□□□ -1.16
HDAC3-203ENST00000467533 RIIAD1A6NNX1 92 aa7.81□□□□□ -1.16
HDAC3-203ENST00000467533 BBIP1A8MTZ0 92 aa7.81□□□□□ -1.16
HDAC3-203ENST00000467533 SELENOFO60613 162 aa7.81□□□□□ -1.16
HDAC3-203ENST00000467533 MOSP00540 346 aa7.81□□□□□ -1.16
HDAC3-203ENST00000467533 CALCBP10092 127 aa7.81□□□□□ -1.16
HDAC3-203ENST00000467533 SLC2A2P11168 524 aaPredicted RBP7.81□□□□□ -1.16
HDAC3-203ENST00000467533 ZNF3P17036 446 aa7.81□□□□□ -1.16
HDAC3-203ENST00000467533 PRKACAP17612 351 aa7.81□□□□□ -1.16
HDAC3-203ENST00000467533 GLP1RP43220 463 aa7.81□□□□□ -1.16
HDAC3-203ENST00000467533 MAGOHP61326 146 aaKnown RBP7.81□□□□□ -1.16
HDAC3-203ENST00000467533 ZNF816Q0VGE8 651 aaPredicted RBP7.81□□□□□ -1.16
HDAC3-203ENST00000467533 LTC4SQ16873 150 aa7.81□□□□□ -1.16
HDAC3-203ENST00000467533 C17orf58Q2M2W7 97 aa7.81□□□□□ -1.16
HDAC3-203ENST00000467533 TMEM42Q69YG0 159 aa7.81□□□□□ -1.16
HDAC3-203ENST00000467533 LINC00322Q6ZN03 302 aaPredicted RBP7.81□□□□□ -1.16
HDAC3-203ENST00000467533 SLC25A26Q70HW3 274 aa7.81□□□□□ -1.16
HDAC3-203ENST00000467533 CROCCP2Q86T23 111 aa7.81□□□□□ -1.16
HDAC3-203ENST00000467533 Q8IYB0 196 aa7.81□□□□□ -1.16
HDAC3-203ENST00000467533 SEBOXQ9HB31 216 aaPredicted RBP7.81□□□□□ -1.16
HDAC3-203ENST00000467533 EXOSC4Q9NPD3 245 aaKnown RBP7.81□□□□□ -1.16
HDAC3-203ENST00000467533 PARP11Q9NR21 331 aa7.81□□□□□ -1.16
HDAC3-203ENST00000467533 RBFOX1Q9NWB1 397 aaKnown RBP7.81□□□□□ -1.16
HDAC3-203ENST00000467533 FAM53CQ9NYF3 392 aa7.81□□□□□ -1.16
HDAC3-203ENST00000467533 PSG11Q9UQ72 335 aa7.81□□□□□ -1.16
HDAC3-203ENST00000467533 KLHDC2Q9Y2U9 406 aa7.81□□□□□ -1.16
HDAC3-203ENST00000467533 TRAV41A0A0B4J266 112 aa7.8□□□□□ -1.16
HDAC3-203ENST00000467533 ACOD1A6NK06 481 aa7.8□□□□□ -1.16
HDAC3-203ENST00000467533 ATP6V0E1O15342 81 aa7.8□□□□□ -1.16
HDAC3-203ENST00000467533 ENTPD6O75354 484 aa7.8□□□□□ -1.16
HDAC3-203ENST00000467533 RGS11O94810 467 aa7.8□□□□□ -1.16
HDAC3-203ENST00000467533 IGLV3-1P01715 115 aa7.8□□□□□ -1.16
HDAC3-203ENST00000467533 IGHV3-11P01762 117 aa7.8□□□□□ -1.16
HDAC3-203ENST00000467533 GAPDHP04406 335 aaKnown RBP7.8□□□□□ -1.16
HDAC3-203ENST00000467533 NCK1P16333 377 aa7.8□□□□□ -1.16
HDAC3-203ENST00000467533 CD81P60033 236 aa7.8□□□□□ -1.16
HDAC3-203ENST00000467533 CDC42P60953 191 aa7.8□□□□□ -1.16
HDAC3-203ENST00000467533 LIPEQ05469 1076 aa7.8□□□□□ -1.16
HDAC3-203ENST00000467533 MFGE8Q08431 387 aaPredicted RBP7.8□□□□□ -1.16
HDAC3-203ENST00000467533 KLF10Q13118 480 aa7.8□□□□□ -1.16
HDAC3-203ENST00000467533 KRBOX4Q5JUW0 171 aa7.8□□□□□ -1.16
HDAC3-203ENST00000467533 SPIN3Q5JUX0 258 aa7.8□□□□□ -1.16
HDAC3-203ENST00000467533 SAMD4BQ5PRF9 694 aaKnown RBP7.8□□□□□ -1.16
HDAC3-203ENST00000467533 LCN12Q6JVE5 192 aa7.8□□□□□ -1.16
HDAC3-203ENST00000467533 FAM58AQ8N1B3 248 aa7.8□□□□□ -1.16
HDAC3-203ENST00000467533 OR8H1Q8NGG4 311 aa7.8□□□□□ -1.16
HDAC3-203ENST00000467533 KCTD12Q96CX2 325 aaKnown RBP7.8□□□□□ -1.16
HDAC3-203ENST00000467533 C7orf34Q96L11 122 aa7.8□□□□□ -1.16
HDAC3-203ENST00000467533 THAP7Q9BT49 309 aaPredicted RBP7.8□□□□□ -1.16
HDAC3-203ENST00000467533 TSSK6Q9BXA6 273 aa7.8□□□□□ -1.16
HDAC3-203ENST00000467533 PLEKHA1Q9HB21 404 aa7.8□□□□□ -1.16
HDAC3-203ENST00000467533 TPSG1Q9NRR2 321 aa7.8□□□□□ -1.16
HDAC3-203ENST00000467533 PLSCR3Q9NRY6 295 aa7.8□□□□□ -1.16
HDAC3-203ENST00000467533 KRT84Q9NSB2 600 aa7.8□□□□□ -1.16
HDAC3-203ENST00000467533 CMTM6Q9NX76 183 aa7.8□□□□□ -1.16
HDAC3-203ENST00000467533 IDI2-AS1Q9NZ38 188 aa7.8□□□□□ -1.16
HDAC3-203ENST00000467533 GTF2A1LQ9UNN4 478 aa7.8□□□□□ -1.16
HDAC3-203ENST00000467533 TRBV2A0A0J9YWF9 115 aa7.79□□□□□ -1.16
HDAC3-203ENST00000467533 KBTBD11-OT1A0A1B0GTJ5 212 aa7.79□□□□□ -1.16
HDAC3-203ENST00000467533 A0A1W2PPE3 182 aa7.79□□□□□ -1.16
HDAC3-203ENST00000467533 TPPPO94811 219 aa7.79□□□□□ -1.16
HDAC3-203ENST00000467533 OR2H2O95918 312 aa7.79□□□□□ -1.16
HDAC3-203ENST00000467533 HSPB1P04792 205 aaKnown RBP7.79□□□□□ -1.16
HDAC3-203ENST00000467533 BCL3P20749 454 aa7.79□□□□□ -1.16
HDAC3-203ENST00000467533 NPBWR2P48146 333 aa7.79□□□□□ -1.16
HDAC3-203ENST00000467533 GALEQ14376 348 aa7.79□□□□□ -1.16
HDAC3-203ENST00000467533 ATXN7L3Q14CW9 347 aaPredicted RBP7.79□□□□□ -1.16
HDAC3-203ENST00000467533 ZNF146Q15072 292 aa7.79□□□□□ -1.16
HDAC3-203ENST00000467533 ZNF829Q3KNS6 432 aaPredicted RBP7.79□□□□□ -1.16
HDAC3-203ENST00000467533 LINC00336Q6ZUF6 198 aa7.79□□□□□ -1.16
HDAC3-203ENST00000467533 ARPINQ7Z6K5 226 aa7.79□□□□□ -1.16
HDAC3-203ENST00000467533 OR2T33Q8NG76 320 aa7.79□□□□□ -1.16
HDAC3-203ENST00000467533 CASTOR1Q8WTX7 329 aa7.79□□□□□ -1.16
HDAC3-203ENST00000467533 STON2Q8WXE9 905 aa7.79□□□□□ -1.16
HDAC3-203ENST00000467533 RGP1Q92546 391 aaPredicted RBP7.79□□□□□ -1.16
HDAC3-203ENST00000467533 TMEM106AQ96A25 262 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms