RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 LIN7BQ9HAP6 207 aa15.33■□□□□ 0.04
COL9A3-206ENST00000466532 ZNF286AQ9HBT8 521 aa15.33■□□□□ 0.04
COL9A3-206ENST00000466532 ING3Q9NXR8 418 aa15.33■□□□□ 0.04
COL9A3-206ENST00000466532 ODAMA1E959 279 aa15.32■□□□□ 0.04
COL9A3-206ENST00000466532 SNTNA6NMZ2 147 aa15.32■□□□□ 0.04
COL9A3-206ENST00000466532 LEUTXA8MZ59 168 aa15.32■□□□□ 0.04
COL9A3-206ENST00000466532 IGLV1-47P01700 117 aa15.32■□□□□ 0.04
COL9A3-206ENST00000466532 CSN2P05814 226 aa15.32■□□□□ 0.04
COL9A3-206ENST00000466532 PTGFRP43088 359 aa15.32■□□□□ 0.04
COL9A3-206ENST00000466532 KRBOX4Q5JUW0 171 aa15.32■□□□□ 0.04
COL9A3-206ENST00000466532 SAXO1Q8IYX7 474 aa15.32■□□□□ 0.04
COL9A3-206ENST00000466532 SLC25A33Q9BSK2 321 aa15.32■□□□□ 0.04
COL9A3-206ENST00000466532 RHOFQ9HBH0 211 aa15.32■□□□□ 0.04
COL9A3-206ENST00000466532 NECAP2Q9NVZ3 263 aa15.32■□□□□ 0.04
COL9A3-206ENST00000466532 EXOGQ9Y2C4 368 aaKnown RBP15.32■□□□□ 0.04
COL9A3-206ENST00000466532 SLC33A1O00400 549 aaPredicted RBP15.31■□□□□ 0.04
COL9A3-206ENST00000466532 TOR1AO14656 332 aa15.31■□□□□ 0.04
COL9A3-206ENST00000466532 HCKP08631 526 aa15.31■□□□□ 0.04
COL9A3-206ENST00000466532 CD34P28906 385 aa15.31■□□□□ 0.04
COL9A3-206ENST00000466532 CEACAM3P40198 252 aa15.31■□□□□ 0.04
COL9A3-206ENST00000466532 CD83Q01151 205 aa15.31■□□□□ 0.04
COL9A3-206ENST00000466532 ATXN7L3Q14CW9 347 aaPredicted RBP15.31■□□□□ 0.04
COL9A3-206ENST00000466532 HLA-DRB5Q30154 266 aa15.31■□□□□ 0.04
COL9A3-206ENST00000466532 Q6P435 159 aa15.31■□□□□ 0.04
COL9A3-206ENST00000466532 CENPVQ7Z7K6 275 aaPredicted RBP15.31■□□□□ 0.04
COL9A3-206ENST00000466532 LHFPL3Q86UP9 236 aa15.31■□□□□ 0.04
COL9A3-206ENST00000466532 CHST4Q8NCG5 386 aa15.31■□□□□ 0.04
COL9A3-206ENST00000466532 OR4D6Q8NGJ1 314 aa15.31■□□□□ 0.04
COL9A3-206ENST00000466532 PHF21AQ96BD5 680 aa15.31■□□□□ 0.04
COL9A3-206ENST00000466532 LGALS12Q96DT0 336 aa15.31■□□□□ 0.04
COL9A3-206ENST00000466532 MRPL48Q96GC5 212 aaKnown RBP15.31■□□□□ 0.04
COL9A3-206ENST00000466532 COQ2Q96H96 371 aa15.31■□□□□ 0.04
COL9A3-206ENST00000466532 ALG8Q9BVK2 526 aa15.31■□□□□ 0.04
COL9A3-206ENST00000466532 AASSQ9UDR5 926 aa15.31■□□□□ 0.04
COL9A3-206ENST00000466532 DEGS1O15121 323 aa15.3■□□□□ 0.04
COL9A3-206ENST00000466532 TMEM225BP0DP42 221 aa15.3■□□□□ 0.04
COL9A3-206ENST00000466532 PF4V1P10720 104 aa15.3■□□□□ 0.04
COL9A3-206ENST00000466532 CD33P20138 364 aa15.3■□□□□ 0.04
COL9A3-206ENST00000466532 ALDH3A2P51648 485 aa15.3■□□□□ 0.04
COL9A3-206ENST00000466532 ABCA11PQ4W5N1 156 aa15.3■□□□□ 0.04
COL9A3-206ENST00000466532 CREB3L1Q96BA8 519 aa15.3■□□□□ 0.04
COL9A3-206ENST00000466532 RBM14Q96PK6 669 aaKnown RBP15.3■□□□□ 0.04
COL9A3-206ENST00000466532 MYCBPQ99417 103 aaPredicted RBP15.3■□□□□ 0.04
COL9A3-206ENST00000466532 AURKAIP1Q9NWT8 199 aaPredicted RBP15.3■□□□□ 0.04
COL9A3-206ENST00000466532 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.3■□□□□ 0.04
COL9A3-206ENST00000466532 MYRFQ9Y2G1 1151 aa15.3■□□□□ 0.04
COL9A3-206ENST00000466532 ZNF729A6NN14 1252 aaPredicted RBP15.29■□□□□ 0.04
COL9A3-206ENST00000466532 E9PQ18 207 aa15.29■□□□□ 0.04
COL9A3-206ENST00000466532 BUB1B-PAK6H3BSN5 160 aa15.29■□□□□ 0.04
COL9A3-206ENST00000466532 SULT1B1O43704 296 aa15.29■□□□□ 0.04
COL9A3-206ENST00000466532 OR2F2O95006 317 aa15.29■□□□□ 0.04
COL9A3-206ENST00000466532 LPLP06858 475 aa15.29■□□□□ 0.04
COL9A3-206ENST00000466532 PRRX1P54821 245 aa15.29■□□□□ 0.04
COL9A3-206ENST00000466532 LOXL3P58215 753 aa15.29■□□□□ 0.04
COL9A3-206ENST00000466532 ZP1P60852 638 aa15.29■□□□□ 0.04
COL9A3-206ENST00000466532 GALEQ14376 348 aa15.29■□□□□ 0.04
COL9A3-206ENST00000466532 RBM39Q14498 530 aaKnown RBP15.29■□□□□ 0.04
COL9A3-206ENST00000466532 KISS1Q15726 138 aa15.29■□□□□ 0.04
COL9A3-206ENST00000466532 TPTE2P1Q5T6R2 138 aa15.29■□□□□ 0.04
COL9A3-206ENST00000466532 CCDC121Q6ZUS5 278 aa15.29■□□□□ 0.04
COL9A3-206ENST00000466532 SERPINA12Q8IW75 414 aa15.29■□□□□ 0.04
COL9A3-206ENST00000466532 PPIL3Q9H2H8 161 aaKnown RBP15.29■□□□□ 0.04
COL9A3-206ENST00000466532 ISG20L2Q9H9L3 353 aaKnown RBP15.29■□□□□ 0.04
COL9A3-206ENST00000466532 A0A087X0M5 115 aa15.28■□□□□ 0.04
COL9A3-206ENST00000466532 A0A1B0GX30 115 aa15.28■□□□□ 0.04
COL9A3-206ENST00000466532 TCRBV4S1A1TA0A5B7 111 aa15.28■□□□□ 0.04
COL9A3-206ENST00000466532 SH2D7A6NKC9 451 aaPredicted RBP15.28■□□□□ 0.04
COL9A3-206ENST00000466532 DBTP11182 482 aaKnown RBP15.28■□□□□ 0.04
COL9A3-206ENST00000466532 IGLL1P15814 213 aa15.28■□□□□ 0.04
COL9A3-206ENST00000466532 NFYBP25208 207 aa15.28■□□□□ 0.04
COL9A3-206ENST00000466532 OR3A4PP47883 348 aa15.28■□□□□ 0.04
COL9A3-206ENST00000466532 CDK5R1Q15078 307 aa15.28■□□□□ 0.04
COL9A3-206ENST00000466532 C17orf58Q2M2W7 97 aa15.28■□□□□ 0.04
COL9A3-206ENST00000466532 TCTEX1D4Q5JR98 221 aa15.28■□□□□ 0.04
COL9A3-206ENST00000466532 UTF1Q5T230 341 aa15.28■□□□□ 0.04
COL9A3-206ENST00000466532 FOXB2Q5VYV0 432 aa15.28■□□□□ 0.04
COL9A3-206ENST00000466532 SYS1Q8N2H4 156 aa15.28■□□□□ 0.04
COL9A3-206ENST00000466532 OR5D14Q8NGL3 314 aa15.28■□□□□ 0.04
COL9A3-206ENST00000466532 OR6C3Q9NZP0 311 aa15.28■□□□□ 0.04
COL9A3-206ENST00000466532 GMPPBQ9Y5P6 360 aa15.28■□□□□ 0.04
COL9A3-206ENST00000466532 TSSC4Q9Y5U2 329 aaPredicted RBP15.28■□□□□ 0.04
COL9A3-206ENST00000466532 TMEM212A6NML5 194 aa15.27■□□□□ 0.04
COL9A3-206ENST00000466532 H0YJX3 145 aa15.27■□□□□ 0.04
COL9A3-206ENST00000466532 H3BNX3 289 aa15.27■□□□□ 0.04
COL9A3-206ENST00000466532 LY6LH3BQJ8 138 aa15.27■□□□□ 0.04
COL9A3-206ENST00000466532 HSPB6O14558 160 aa15.27■□□□□ 0.04
COL9A3-206ENST00000466532 ALX3O95076 343 aa15.27■□□□□ 0.04
COL9A3-206ENST00000466532 ZFPL1O95159 310 aa15.27■□□□□ 0.04
COL9A3-206ENST00000466532 RPSAP08865 295 aaKnown RBP15.27■□□□□ 0.04
COL9A3-206ENST00000466532 GABRB1P18505 474 aa15.27■□□□□ 0.04
COL9A3-206ENST00000466532 MNDAP41218 407 aa15.27■□□□□ 0.04
COL9A3-206ENST00000466532 MTNR1BP49286 362 aa15.27■□□□□ 0.04
COL9A3-206ENST00000466532 ZNF691Q5VV52 312 aa15.27■□□□□ 0.04
COL9A3-206ENST00000466532 LPCAT4Q643R3 524 aa15.27■□□□□ 0.04
COL9A3-206ENST00000466532 CCDC144NLQ6NUI1 221 aa15.27■□□□□ 0.04
COL9A3-206ENST00000466532 CBR4Q8N4T8 237 aa15.27■□□□□ 0.04
COL9A3-206ENST00000466532 PARP16Q8N5Y8 322 aa15.27■□□□□ 0.04
COL9A3-206ENST00000466532 WFDC9Q8NEX5 89 aa15.27■□□□□ 0.04
COL9A3-206ENST00000466532 OR4X2Q8NGF9 303 aa15.27■□□□□ 0.04
COL9A3-206ENST00000466532 TSEN15Q8WW01 171 aaKnown RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms