RNA–Protein interactions for RNA: ENST00000465238.5

COL7A1-205, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-205ENST00000465238 LYPD6Q86Y78 171 aa14.58□□□□□ -0.08
COL7A1-205ENST00000465238 OSR2Q8N2R0 312 aa14.58□□□□□ -0.08
COL7A1-205ENST00000465238 Q8NFD4 153 aa14.58□□□□□ -0.08
COL7A1-205ENST00000465238 OR4D6Q8NGJ1 314 aa14.58□□□□□ -0.08
COL7A1-205ENST00000465238 STUB1Q9UNE7 303 aa14.58□□□□□ -0.08
COL7A1-205ENST00000465238 SSR3Q9UNL2 185 aa14.58□□□□□ -0.08
COL7A1-205ENST00000465238 TRBV23-1A0A0A0MS06 115 aa14.57□□□□□ -0.08
COL7A1-205ENST00000465238 A0A1W2PQ09 198 aa14.57□□□□□ -0.08
COL7A1-205ENST00000465238 TMEM82A0PJX8 343 aa14.57□□□□□ -0.08
COL7A1-205ENST00000465238 PDCD5O14737 125 aa14.57□□□□□ -0.08
COL7A1-205ENST00000465238 WIPF1O43516 503 aa14.57□□□□□ -0.08
COL7A1-205ENST00000465238 ZNF737O75373 536 aa14.57□□□□□ -0.08
COL7A1-205ENST00000465238 OR2H2O95918 312 aa14.57□□□□□ -0.08
COL7A1-205ENST00000465238 GTF2F2P13984 249 aa14.57□□□□□ -0.08
COL7A1-205ENST00000465238 MYL9P24844 172 aa14.57□□□□□ -0.08
COL7A1-205ENST00000465238 PSMD7P51665 324 aa14.57□□□□□ -0.08
COL7A1-205ENST00000465238 BPIFB3P59826 476 aa14.57□□□□□ -0.08
COL7A1-205ENST00000465238 C1orf100Q5SVJ3 147 aa14.57□□□□□ -0.08
COL7A1-205ENST00000465238 C22orf42Q6IC83 251 aa14.57□□□□□ -0.08
COL7A1-205ENST00000465238 GDPD3Q7L5L3 318 aa14.57□□□□□ -0.08
COL7A1-205ENST00000465238 LY6G5BQ8NDX9 201 aa14.57□□□□□ -0.08
COL7A1-205ENST00000465238 OR51T1Q8NGJ9 327 aa14.57□□□□□ -0.08
COL7A1-205ENST00000465238 C8orf46Q8TAG6 207 aa14.57□□□□□ -0.08
COL7A1-205ENST00000465238 TBC1D15Q8TC07 691 aa14.57□□□□□ -0.08
COL7A1-205ENST00000465238 DMRTB1Q96MA1 342 aa14.57□□□□□ -0.08
COL7A1-205ENST00000465238 UNKLQ9H9P5 680 aaKnown RBP14.57□□□□□ -0.08
COL7A1-205ENST00000465238 GHRLQ9UBU3 117 aa14.57□□□□□ -0.08
COL7A1-205ENST00000465238 ST3GAL6Q9Y274 331 aa14.57□□□□□ -0.08
COL7A1-205ENST00000465238 AK6Q9Y3D8 172 aaKnown RBP14.57□□□□□ -0.08
COL7A1-205ENST00000465238 UBBP0CG47 229 aa14.56□□□□□ -0.08
COL7A1-205ENST00000465238 CD36P16671 472 aa14.56□□□□□ -0.08
COL7A1-205ENST00000465238 LMO1P25800 156 aa14.56□□□□□ -0.08
COL7A1-205ENST00000465238 ARF6P62330 175 aa14.56□□□□□ -0.08
COL7A1-205ENST00000465238 IL13RA2Q14627 380 aa14.56□□□□□ -0.08
COL7A1-205ENST00000465238 GRK1Q15835 563 aa14.56□□□□□ -0.08
COL7A1-205ENST00000465238 METTL11BQ5VVY1 283 aa14.56□□□□□ -0.08
COL7A1-205ENST00000465238 Q6P435 159 aa14.56□□□□□ -0.08
COL7A1-205ENST00000465238 C16orf87Q6PH81 154 aa14.56□□□□□ -0.08
COL7A1-205ENST00000465238 CMTM4Q8IZR5 234 aa14.56□□□□□ -0.08
COL7A1-205ENST00000465238 FAM185AQ8N0U4 392 aa14.56□□□□□ -0.08
COL7A1-205ENST00000465238 OR8H2Q8N162 312 aa14.56□□□□□ -0.08
COL7A1-205ENST00000465238 CHST4Q8NCG5 386 aa14.56□□□□□ -0.08
COL7A1-205ENST00000465238 PRDM13Q9H4Q3 707 aa14.56□□□□□ -0.08
COL7A1-205ENST00000465238 PLGRKTQ9HBL7 147 aa14.56□□□□□ -0.08
COL7A1-205ENST00000465238 TXNL4BQ9NX01 149 aaKnown RBP14.56□□□□□ -0.08
COL7A1-205ENST00000465238 ONECUT1Q9UBC0 465 aa14.56□□□□□ -0.08
COL7A1-205ENST00000465238 SOX21Q9Y651 276 aaPredicted RBP14.56□□□□□ -0.08
COL7A1-205ENST00000465238 TRAV1-2A0A0B4J238 106 aa14.55□□□□□ -0.08
COL7A1-205ENST00000465238 A0A0G2JK05 382 aa14.55□□□□□ -0.08
COL7A1-205ENST00000465238 TRIM64CA6NLI5 447 aa14.55□□□□□ -0.08
COL7A1-205ENST00000465238 JUNBP17275 347 aaPredicted RBP14.55□□□□□ -0.08
COL7A1-205ENST00000465238 HTR2CP28335 458 aa14.55□□□□□ -0.08
COL7A1-205ENST00000465238 FGF9P31371 208 aaPredicted RBP14.55□□□□□ -0.08
COL7A1-205ENST00000465238 EDDM3BP56851 147 aa14.55□□□□□ -0.08
COL7A1-205ENST00000465238 RPL31P62899 125 aaKnown RBP14.55□□□□□ -0.08
COL7A1-205ENST00000465238 PDCD1Q15116 288 aa14.55□□□□□ -0.08
COL7A1-205ENST00000465238 PIGYQ3MUY2 71 aa14.55□□□□□ -0.08
COL7A1-205ENST00000465238 GPR157Q5UAW9 335 aa14.55□□□□□ -0.08
COL7A1-205ENST00000465238 C17orf107Q6ZR85 190 aa14.55□□□□□ -0.08
COL7A1-205ENST00000465238 OR4S1Q8NGB4 309 aa14.55□□□□□ -0.08
COL7A1-205ENST00000465238 OR4M1Q8NGD0 313 aa14.55□□□□□ -0.08
COL7A1-205ENST00000465238 OR6M1Q8NGM8 313 aa14.55□□□□□ -0.08
COL7A1-205ENST00000465238 MRPS24Q96EL2 167 aaKnown RBP14.55□□□□□ -0.08
COL7A1-205ENST00000465238 PCGF1Q9BSM1 259 aa14.55□□□□□ -0.08
COL7A1-205ENST00000465238 CHST6Q9GZX3 395 aa14.55□□□□□ -0.08
COL7A1-205ENST00000465238 OR51E2Q9H255 320 aa14.55□□□□□ -0.08
COL7A1-205ENST00000465238 C19orf12Q9NSK7 152 aa14.55□□□□□ -0.08
COL7A1-205ENST00000465238 V9GY05 133 aa14.55□□□□□ -0.08
COL7A1-205ENST00000465238 A0A1W2PP11 408 aa14.54□□□□□ -0.08
COL7A1-205ENST00000465238 A0A1W2PPH5 198 aa14.54□□□□□ -0.08
COL7A1-205ENST00000465238 MGST3O14880 152 aa14.54□□□□□ -0.08
COL7A1-205ENST00000465238 PSPNO60542 156 aa14.54□□□□□ -0.08
COL7A1-205ENST00000465238 CRTAPO75718 401 aaPredicted RBP14.54□□□□□ -0.08
COL7A1-205ENST00000465238 TOX4O94842 621 aa14.54□□□□□ -0.08
COL7A1-205ENST00000465238 CD37P11049 281 aa14.54□□□□□ -0.08
COL7A1-205ENST00000465238 RANBP1P43487 201 aa14.54□□□□□ -0.08
COL7A1-205ENST00000465238 RBM11P57052 281 aaKnown RBP14.54□□□□□ -0.08
COL7A1-205ENST00000465238 EDDM3AQ14507 147 aa14.54□□□□□ -0.08
COL7A1-205ENST00000465238 DEFB112Q30KQ8 113 aa14.54□□□□□ -0.08
COL7A1-205ENST00000465238 NHLRC3Q5JS37 347 aa14.54□□□□□ -0.08
COL7A1-205ENST00000465238 BRD3OSQ6XYD6 125 aa14.54□□□□□ -0.08
COL7A1-205ENST00000465238 LINC00596Q86U02 117 aa14.54□□□□□ -0.08
COL7A1-205ENST00000465238 ZDHHC16Q969W1 377 aa14.54□□□□□ -0.08
COL7A1-205ENST00000465238 WDFY2Q96P53 400 aa14.54□□□□□ -0.08
COL7A1-205ENST00000465238 GFI1Q99684 422 aa14.54□□□□□ -0.08
COL7A1-205ENST00000465238 CHCHD6Q9BRQ6 235 aa14.54□□□□□ -0.08
COL7A1-205ENST00000465238 CST11Q9H112 138 aa14.54□□□□□ -0.08
COL7A1-205ENST00000465238 KPTNQ9Y664 436 aa14.54□□□□□ -0.08
COL7A1-205ENST00000465238 LOC100506127A0A0U1RQW1 187 aa14.53□□□□□ -0.08
COL7A1-205ENST00000465238 MDFIC2A0A1B0GVS7 189 aa14.53□□□□□ -0.08
COL7A1-205ENST00000465238 FUOMA2VDF0 154 aa14.53□□□□□ -0.08
COL7A1-205ENST00000465238 SLC33A1O00400 549 aaPredicted RBP14.53□□□□□ -0.08
COL7A1-205ENST00000465238 SLC17A2O00624 439 aa14.53□□□□□ -0.08
COL7A1-205ENST00000465238 SLC22A1O15245 554 aa14.53□□□□□ -0.08
COL7A1-205ENST00000465238 HOXA3O43365 443 aaPredicted RBP14.53□□□□□ -0.08
COL7A1-205ENST00000465238 OR7C1O76099 320 aaPredicted RBP14.53□□□□□ -0.08
COL7A1-205ENST00000465238 MGMTP16455 207 aa14.53□□□□□ -0.08
COL7A1-205ENST00000465238 GADD45AP24522 165 aa14.53□□□□□ -0.08
COL7A1-205ENST00000465238 OR3A1P47881 315 aa14.53□□□□□ -0.08
COL7A1-205ENST00000465238 BLMHQ13867 455 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms