RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 LINC01560Q8TB33 94 aa3.31□□□□□ -1.88
UBR4-209ENST00000465036 GPR119Q8TDV5 335 aa3.31□□□□□ -1.88
UBR4-209ENST00000465036 ROPN1LQ96C74 230 aa3.31□□□□□ -1.88
UBR4-209ENST00000465036 STARD4Q96DR4 205 aa3.31□□□□□ -1.88
UBR4-209ENST00000465036 ATP5SQ99766 215 aa3.31□□□□□ -1.88
UBR4-209ENST00000465036 WFDC6Q9BQY6 131 aa3.31□□□□□ -1.88
UBR4-209ENST00000465036 OVOL2Q9BRP0 275 aa3.31□□□□□ -1.88
UBR4-209ENST00000465036 CCDC28BQ9BUN5 200 aa3.31□□□□□ -1.88
UBR4-209ENST00000465036 CHID1Q9BWS9 393 aa3.31□□□□□ -1.88
UBR4-209ENST00000465036 DGCR6LQ9BY27 220 aa3.31□□□□□ -1.88
UBR4-209ENST00000465036 SRXN1Q9BYN0 137 aa3.31□□□□□ -1.88
UBR4-209ENST00000465036 NMUR2Q9GZQ4 415 aa3.31□□□□□ -1.88
UBR4-209ENST00000465036 OPN3Q9H1Y3 402 aaPredicted RBP3.31□□□□□ -1.88
UBR4-209ENST00000465036 OR51M1Q9H341 326 aa3.31□□□□□ -1.88
UBR4-209ENST00000465036 LIME1Q9H400 295 aa3.31□□□□□ -1.88
UBR4-209ENST00000465036 ZNF385DQ9H6B1 395 aa3.31□□□□□ -1.88
UBR4-209ENST00000465036 PTGES2Q9H7Z7 377 aa3.31□□□□□ -1.88
UBR4-209ENST00000465036 TPT1P8Q9HAU6 139 aa3.31□□□□□ -1.88
UBR4-209ENST00000465036 ZC4H2Q9NQZ6 224 aa3.31□□□□□ -1.88
UBR4-209ENST00000465036 CCDC167Q9P0B6 97 aa3.31□□□□□ -1.88
UBR4-209ENST00000465036 VAPAQ9P0L0 249 aa3.31□□□□□ -1.88
UBR4-209ENST00000465036 MYO9AB2RTY4 2548 aa3.31□□□□□ -1.88
UBR4-209ENST00000465036 ANKHD1Q8IWZ3 2542 aaKnown RBP3.31□□□□□ -1.88
UBR4-209ENST00000465036 SPG11Q96JI7 2443 aa3.31□□□□□ -1.88
UBR4-209ENST00000465036 MED12LQ86YW9 2145 aa3.31□□□□□ -1.88
UBR4-209ENST00000465036 HEATR5AQ86XA9 2040 aa3.31□□□□□ -1.88
UBR4-209ENST00000465036 OTOGQ6ZRI0 2925 aa3.3□□□□□ -1.88
UBR4-209ENST00000465036 CCDC168Q8NDH2 2452 aa3.3□□□□□ -1.88
UBR4-209ENST00000465036 AKAP6Q13023 2319 aa3.3□□□□□ -1.88
UBR4-209ENST00000465036 A0A096LPI6 279 aa3.3□□□□□ -1.88
UBR4-209ENST00000465036 TRBV9A0A0B4J1U6 114 aa3.3□□□□□ -1.88
UBR4-209ENST00000465036 IGHV2-70DA0A0C4DH43 119 aa3.3□□□□□ -1.88
UBR4-209ENST00000465036 H3BMQ9 156 aa3.3□□□□□ -1.88
UBR4-209ENST00000465036 NDUFAB1O14561 156 aa3.3□□□□□ -1.88
UBR4-209ENST00000465036 TOR1AO14656 332 aa3.3□□□□□ -1.88
UBR4-209ENST00000465036 OR10H3O60404 316 aa3.3□□□□□ -1.88
UBR4-209ENST00000465036 GMDSO60547 372 aa3.3□□□□□ -1.88
UBR4-209ENST00000465036 RAMP1O60894 148 aa3.3□□□□□ -1.88
UBR4-209ENST00000465036 IFNW1P05000 195 aa3.3□□□□□ -1.88
UBR4-209ENST00000465036 BCHEP06276 602 aa3.3□□□□□ -1.88
UBR4-209ENST00000465036 HOXD4P09016 255 aaPredicted RBP3.3□□□□□ -1.88
UBR4-209ENST00000465036 TFPTP0C1Z6 253 aa3.3□□□□□ -1.88
UBR4-209ENST00000465036 GKN3PP0CG01 181 aa3.3□□□□□ -1.88
UBR4-209ENST00000465036 ZNF17P17021 662 aa3.3□□□□□ -1.88
UBR4-209ENST00000465036 PMCHP20382 165 aa3.3□□□□□ -1.88
UBR4-209ENST00000465036 RPS4Y1P22090 263 aaKnown RBP3.3□□□□□ -1.88
UBR4-209ENST00000465036 GCKP35557 465 aa3.3□□□□□ -1.88
UBR4-209ENST00000465036 OPRL1P41146 370 aa3.3□□□□□ -1.88
UBR4-209ENST00000465036 IDH2P48735 452 aaKnown RBP3.3□□□□□ -1.88
UBR4-209ENST00000465036 P2RX1P51575 399 aa3.3□□□□□ -1.88
UBR4-209ENST00000465036 PAX9P55771 341 aa3.3□□□□□ -1.88
UBR4-209ENST00000465036 XGP55808 180 aa3.3□□□□□ -1.88
UBR4-209ENST00000465036 DSTNP60981 165 aa3.3□□□□□ -1.88
UBR4-209ENST00000465036 HOXC5Q00444 222 aa3.3□□□□□ -1.88
UBR4-209ENST00000465036 TLE4Q04727 773 aa3.3□□□□□ -1.88
UBR4-209ENST00000465036 BNIP2Q12982 314 aa3.3□□□□□ -1.88
UBR4-209ENST00000465036 CAPRIN1Q14444 709 aaKnown RBP3.3□□□□□ -1.88
UBR4-209ENST00000465036 LAGE3Q14657 143 aa3.3□□□□□ -1.88
UBR4-209ENST00000465036 RGNQ15493 299 aa3.3□□□□□ -1.88
UBR4-209ENST00000465036 BCL2A1Q16548 175 aa3.3□□□□□ -1.88
UBR4-209ENST00000465036 SLC25A35Q3KQZ1 300 aa3.3□□□□□ -1.88
UBR4-209ENST00000465036 TMEM176BQ3YBM2 270 aaPredicted RBP3.3□□□□□ -1.88
UBR4-209ENST00000465036 SOHLH1Q5JUK2 328 aa3.3□□□□□ -1.88
UBR4-209ENST00000465036 HBMQ6B0K9 141 aa3.3□□□□□ -1.88
UBR4-209ENST00000465036 ZNF836Q6ZNA1 936 aa3.3□□□□□ -1.88
UBR4-209ENST00000465036 Q6ZSR3 168 aa3.3□□□□□ -1.88
UBR4-209ENST00000465036 MTERF4Q7Z6M4 381 aaKnown RBP3.3□□□□□ -1.88
UBR4-209ENST00000465036 CNEP1R1Q8N9A8 125 aa3.3□□□□□ -1.88
UBR4-209ENST00000465036 OR6F1Q8NGZ6 308 aa3.3□□□□□ -1.88
UBR4-209ENST00000465036 OR5W2Q8NH69 310 aa3.3□□□□□ -1.88
UBR4-209ENST00000465036 OR2V1Q8NHB1 315 aa3.3□□□□□ -1.88
UBR4-209ENST00000465036 ABHD3Q8WU67 409 aa3.3□□□□□ -1.88
UBR4-209ENST00000465036 RNASE6Q93091 150 aaKnown RBP3.3□□□□□ -1.88
UBR4-209ENST00000465036 ITCHQ96J02 903 aa3.3□□□□□ -1.88
UBR4-209ENST00000465036 OR5B2Q96R09 309 aa3.3□□□□□ -1.88
UBR4-209ENST00000465036 OR11A1Q9GZK7 315 aa3.3□□□□□ -1.88
UBR4-209ENST00000465036 HOXD1Q9GZZ0 328 aa3.3□□□□□ -1.88
UBR4-209ENST00000465036 RNF122Q9H9V4 155 aa3.3□□□□□ -1.88
UBR4-209ENST00000465036 CTPS2Q9NRF8 586 aa3.3□□□□□ -1.88
UBR4-209ENST00000465036 EXD2Q9NVH0 621 aa3.3□□□□□ -1.88
UBR4-209ENST00000465036 FGFR1OP2Q9NVK5 253 aa3.3□□□□□ -1.88
UBR4-209ENST00000465036 TAS2R16Q9NYV7 291 aa3.3□□□□□ -1.88
UBR4-209ENST00000465036 ZNF629Q9UEG4 869 aaPredicted RBP3.3□□□□□ -1.88
UBR4-209ENST00000465036 CREBBPQ92793 2442 aa3.3□□□□□ -1.88
UBR4-209ENST00000465036 ZFHX3Q15911 3703 aa3.3□□□□□ -1.88
UBR4-209ENST00000465036 TEP1Q99973 2627 aaKnown RBP3.29□□□□□ -1.88
UBR4-209ENST00000465036 DSPPQ9NZW4 1301 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 A0A1B0GW15 77 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 A0A1W2PP18 115 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 TMEM72A0PK05 275 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 H3BNH8 94 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 FXYD1O00168 92 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 FCN1O00602 326 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 TPST1O60507 370 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 EIF4E2O60573 245 aaKnown RBP3.29□□□□□ -1.88
UBR4-209ENST00000465036 ENTPD5O75356 428 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 HSBP1O75506 76 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 GCM2O75603 506 aaPredicted RBP3.29□□□□□ -1.88
UBR4-209ENST00000465036 FARS2O95363 451 aaKnown RBP3.29□□□□□ -1.88
UBR4-209ENST00000465036 KRT75O95678 551 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms