RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 MEGF10Q96KG7 1140 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 NOL4LQ96MY1 436 aaPredicted RBP6.32□□□□□ -1.4
USP48-206ENST00000464577 ATP5SQ99766 215 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 HIST1H2BLQ99880 126 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 CTDSP1Q9GZU7 261 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 CALHM2Q9HA72 323 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 CDH20Q9HBT6 801 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 CISD1Q9NZ45 108 aaKnown RBP6.32□□□□□ -1.4
USP48-206ENST00000464577 SLC7A11Q9UPY5 501 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 RFNGQ9Y644 331 aa6.32□□□□□ -1.4
USP48-206ENST00000464577 IGLV3-12A0A075B6K2 115 aa6.31□□□□□ -1.4
USP48-206ENST00000464577 IGKV1-27A0A075B6S5 117 aa6.31□□□□□ -1.4
USP48-206ENST00000464577 C9J4A7 227 aa6.31□□□□□ -1.4
USP48-206ENST00000464577 LINC01565O15544 149 aa6.31□□□□□ -1.4
USP48-206ENST00000464577 SPRY1O43609 319 aaPredicted RBP6.31□□□□□ -1.4
USP48-206ENST00000464577 ANGPTL7O43827 346 aa6.31□□□□□ -1.4
USP48-206ENST00000464577 SSSCA1O60232 199 aa6.31□□□□□ -1.4
USP48-206ENST00000464577 PDCD6O75340 191 aa6.31□□□□□ -1.4
USP48-206ENST00000464577 ONECUT2O95948 504 aa6.31□□□□□ -1.4
USP48-206ENST00000464577 OPN1MWP04001 364 aa6.31□□□□□ -1.4
USP48-206ENST00000464577 CD63P08962 238 aa6.31□□□□□ -1.4
USP48-206ENST00000464577 OPN1MW2P0DN77 364 aa6.31□□□□□ -1.4
USP48-206ENST00000464577 OPN1MW3P0DN78 364 aa6.31□□□□□ -1.4
USP48-206ENST00000464577 IL2RGP31785 369 aa6.31□□□□□ -1.4
USP48-206ENST00000464577 CLDN17P56750 224 aa6.31□□□□□ -1.4
USP48-206ENST00000464577 ID3Q02535 119 aa6.31□□□□□ -1.4
USP48-206ENST00000464577 FOXO1Q12778 655 aa6.31□□□□□ -1.4
USP48-206ENST00000464577 JOSD1Q15040 202 aaPredicted RBP6.31□□□□□ -1.4
USP48-206ENST00000464577 ZNF124Q15973 351 aa6.31□□□□□ -1.4
USP48-206ENST00000464577 SRSF7Q16629 238 aaKnown RBP eCLIP6.31□□□□□ -1.4
USP48-206ENST00000464577 NMSQ5H8A3 153 aa6.31□□□□□ -1.4
USP48-206ENST00000464577 ZNF695Q8IW36 515 aa6.31□□□□□ -1.4
USP48-206ENST00000464577 TMEM183AQ8IXX5 376 aa6.31□□□□□ -1.4
USP48-206ENST00000464577 H1FOOQ8IZA3 346 aaPredicted RBP6.31□□□□□ -1.4
USP48-206ENST00000464577 SELENOHQ8IZQ5 122 aaKnown RBP6.31□□□□□ -1.4
USP48-206ENST00000464577 OSR2Q8N2R0 312 aa6.31□□□□□ -1.4
USP48-206ENST00000464577 IL22RA1Q8N6P7 574 aa6.31□□□□□ -1.4
USP48-206ENST00000464577 IL22RA2Q969J5 263 aa6.31□□□□□ -1.4
USP48-206ENST00000464577 ZNF581Q9P0T4 197 aa6.31□□□□□ -1.4
USP48-206ENST00000464577 TP53TG5Q9Y2B4 290 aa6.31□□□□□ -1.4
USP48-206ENST00000464577 MTCH2Q9Y6C9 303 aa6.31□□□□□ -1.4
USP48-206ENST00000464577 TRBV11-1A0A0K0K1C0 115 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 DHHO43323 396 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 ZNF205O95201 554 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 GLI4P10075 376 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 BCL2P10415 239 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 EPHA1P21709 976 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 CRYGSP22914 178 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 OMGP23515 440 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 SPCS3P61009 180 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 MALLQ13021 153 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 CHAF1BQ13112 559 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 RAB35Q15286 201 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 SSX2Q16385 188 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 SNAI3Q3KNW1 292 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 PDZD11Q5EBL8 140 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 COA6Q5JTJ3 125 aaKnown RBP6.3□□□□□ -1.4
USP48-206ENST00000464577 TMEM42Q69YG0 159 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 WDR5BQ86VZ2 330 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 KMT5CQ86Y97 462 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 FADS6Q8N9I5 356 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 PLPPR1Q8TBJ4 325 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 DYRK2Q92630 601 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 RAB24Q969Q5 203 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 BORCS8Q96FH0 119 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 SIGLEC12Q96PQ1 595 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 P2RX4Q99571 388 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 ACTR3CQ9C0K3 210 aaPredicted RBP6.3□□□□□ -1.4
USP48-206ENST00000464577 SMOC1Q9H4F8 434 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 METTL7AQ9H8H3 244 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 CERS4Q9HA82 394 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 UBE2J1Q9Y385 318 aaPredicted RBP6.3□□□□□ -1.4
USP48-206ENST00000464577 IGHV1OR21-1A0A087WYE8 117 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 PIGBOS1A0A0B4J2F0 54 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 A0A1W2PR77 199 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 LMO7DNF2Z398 122 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 ADAM20O43506 726 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 PIAS2O75928 621 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 TMEM50AO95807 157 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 OPN1LWP04000 364 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 NDUFB7P17568 137 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 FUT3P21217 361 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 VDAC1P21796 283 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 UCP1P25874 307 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 NPBWR2P48146 333 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 RUNX1Q01196 453 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 ZFP36L1Q07352 338 aaKnown RBP6.3□□□□□ -1.4
USP48-206ENST00000464577 RNPS1Q15287 305 aaKnown RBP6.3□□□□□ -1.4
USP48-206ENST00000464577 PIGYQ3MUY2 71 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 CXorf66Q5JRM2 361 aaPredicted RBP6.3□□□□□ -1.4
USP48-206ENST00000464577 PHYHD1Q5SRE7 291 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 UNQ6494/PRO21346Q6UXR6 183 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 Q6ZPA2 131 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 CPEB2Q7Z5Q1 589 aaKnown RBP6.3□□□□□ -1.4
USP48-206ENST00000464577 TBC1D26Q86UD7 250 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 PLXDC1Q8IUK5 500 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 C20orf196Q8IYI0 205 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 TMEM123Q8N131 208 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 SUMF1Q8NBK3 374 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 BEND2Q8NDZ0 799 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms