RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 ZNF266Q14584 549 aa3.1□□□□□ -1.91
PTCD3-205ENST00000464541 MOGQ16653 247 aa3.1□□□□□ -1.91
PTCD3-205ENST00000464541 CDNFQ49AH0 187 aa3.1□□□□□ -1.91
PTCD3-205ENST00000464541 ARL9Q6T311 187 aa3.1□□□□□ -1.91
PTCD3-205ENST00000464541 EPGNQ6UW88 154 aa3.1□□□□□ -1.91
PTCD3-205ENST00000464541 CALHM1Q8IU99 346 aa3.1□□□□□ -1.91
PTCD3-205ENST00000464541 GID4Q8IVV7 300 aa3.1□□□□□ -1.91
PTCD3-205ENST00000464541 CPNE9Q8IYJ1 553 aa3.1□□□□□ -1.91
PTCD3-205ENST00000464541 PRSS58Q8IYP2 241 aa3.1□□□□□ -1.91
PTCD3-205ENST00000464541 TBC1D19Q8N5T2 526 aa3.1□□□□□ -1.91
PTCD3-205ENST00000464541 ZNF680Q8NEM1 530 aa3.1□□□□□ -1.91
PTCD3-205ENST00000464541 OR10W1Q8NGF6 305 aa3.1□□□□□ -1.91
PTCD3-205ENST00000464541 OR52E4Q8NGH9 312 aa3.1□□□□□ -1.91
PTCD3-205ENST00000464541 OR1S1Q8NH92 325 aa3.1□□□□□ -1.91
PTCD3-205ENST00000464541 C16orf78Q8WTQ4 265 aa3.1□□□□□ -1.91
PTCD3-205ENST00000464541 FAM172AQ8WUF8 416 aa3.1□□□□□ -1.91
PTCD3-205ENST00000464541 TLCD1Q96CP7 247 aa3.1□□□□□ -1.91
PTCD3-205ENST00000464541 DGCR14Q96DF8 476 aaKnown RBP3.1□□□□□ -1.91
PTCD3-205ENST00000464541 MBOAT7Q96N66 472 aa3.1□□□□□ -1.91
PTCD3-205ENST00000464541 RDH12Q96NR8 316 aa3.1□□□□□ -1.91
PTCD3-205ENST00000464541 PRAP1Q96NZ9 151 aa3.1□□□□□ -1.91
PTCD3-205ENST00000464541 PITX2Q99697 317 aa3.1□□□□□ -1.91
PTCD3-205ENST00000464541 PRRT1Q99946 306 aa3.1□□□□□ -1.91
PTCD3-205ENST00000464541 C20orf144Q9BQM9 153 aa3.1□□□□□ -1.91
PTCD3-205ENST00000464541 CDCA4Q9BXL8 241 aa3.1□□□□□ -1.91
PTCD3-205ENST00000464541 BCL2L14Q9BZR8 327 aa3.1□□□□□ -1.91
PTCD3-205ENST00000464541 RGS18Q9NS28 235 aa3.1□□□□□ -1.91
PTCD3-205ENST00000464541 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.1□□□□□ -1.91
PTCD3-205ENST00000464541 ANXA10Q9UJ72 324 aa3.1□□□□□ -1.91
PTCD3-205ENST00000464541 ST3GAL6Q9Y274 331 aa3.1□□□□□ -1.91
PTCD3-205ENST00000464541 FARSAQ9Y285 508 aaKnown RBP3.1□□□□□ -1.91
PTCD3-205ENST00000464541 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.1□□□□□ -1.91
PTCD3-205ENST00000464541 IGLV3-12A0A075B6K2 115 aa3.09□□□□□ -1.91
PTCD3-205ENST00000464541 TINCRA0A1B0GVN0 87 aa3.09□□□□□ -1.91
PTCD3-205ENST00000464541 F5H5T6 163 aa3.09□□□□□ -1.91
PTCD3-205ENST00000464541 MYL12BO14950 172 aa3.09□□□□□ -1.91
PTCD3-205ENST00000464541 AZIN1O14977 448 aa3.09□□□□□ -1.91
PTCD3-205ENST00000464541 IFNGR2P38484 337 aa3.09□□□□□ -1.91
PTCD3-205ENST00000464541 CD79BP40259 229 aa3.09□□□□□ -1.91
PTCD3-205ENST00000464541 ERFP50548 548 aa3.09□□□□□ -1.91
PTCD3-205ENST00000464541 RND2P52198 227 aa3.09□□□□□ -1.91
PTCD3-205ENST00000464541 CLDN12P56749 244 aa3.09□□□□□ -1.91
PTCD3-205ENST00000464541 ALX1Q15699 326 aa3.09□□□□□ -1.91
PTCD3-205ENST00000464541 HLA-DRB5Q30154 266 aa3.09□□□□□ -1.91
PTCD3-205ENST00000464541 PRR9Q5T870 116 aa3.09□□□□□ -1.91
PTCD3-205ENST00000464541 HHATQ5VTY9 493 aa3.09□□□□□ -1.91
PTCD3-205ENST00000464541 TMED4Q7Z7H5 227 aa3.09□□□□□ -1.91
PTCD3-205ENST00000464541 CASTOR1Q8WTX7 329 aa3.09□□□□□ -1.91
PTCD3-205ENST00000464541 LRRC29Q8WV35 223 aa3.09□□□□□ -1.91
PTCD3-205ENST00000464541 PYDC1Q8WXC3 89 aa3.09□□□□□ -1.91
PTCD3-205ENST00000464541 NTAN1Q96AB6 310 aa3.09□□□□□ -1.91
PTCD3-205ENST00000464541 RAD51AP1Q96B01 352 aa3.09□□□□□ -1.91
PTCD3-205ENST00000464541 SNF8Q96H20 258 aa3.09□□□□□ -1.91
PTCD3-205ENST00000464541 SLC22A4Q9H015 551 aa3.09□□□□□ -1.91
PTCD3-205ENST00000464541 SPNS1Q9H2V7 528 aa3.09□□□□□ -1.91
PTCD3-205ENST00000464541 MYOZ1Q9NP98 299 aaPredicted RBP3.09□□□□□ -1.91
PTCD3-205ENST00000464541 TAS2R13Q9NYV9 303 aa3.09□□□□□ -1.91
PTCD3-205ENST00000464541 ZNF532Q9HCE3 1301 aa3.09□□□□□ -1.91
PTCD3-205ENST00000464541 ROCK1Q13464 1354 aa3.09□□□□□ -1.92
PTCD3-205ENST00000464541 ARGFXA6NJG6 315 aa3.08□□□□□ -1.92
PTCD3-205ENST00000464541 CEACAM18A8MTB9 384 aa3.08□□□□□ -1.92
PTCD3-205ENST00000464541 TMEM238C9JI98 176 aa3.08□□□□□ -1.92
PTCD3-205ENST00000464541 RPL36A-HNRNPH2H7BZ11 118 aa3.08□□□□□ -1.92
PTCD3-205ENST00000464541 H7C1H1 209 aa3.08□□□□□ -1.92
PTCD3-205ENST00000464541 EIF4EP06730 217 aaKnown RBP3.08□□□□□ -1.92
PTCD3-205ENST00000464541 C1GALT1C1LP0DN25 315 aa3.08□□□□□ -1.92
PTCD3-205ENST00000464541 HIST1H1EP10412 219 aaKnown RBP3.08□□□□□ -1.92
PTCD3-205ENST00000464541 CD99P14209 185 aa3.08□□□□□ -1.92
PTCD3-205ENST00000464541 MYL12AP19105 171 aa3.08□□□□□ -1.92
PTCD3-205ENST00000464541 ME2P23368 584 aa3.08□□□□□ -1.92
PTCD3-205ENST00000464541 RPS12P25398 132 aaKnown RBP3.08□□□□□ -1.92
PTCD3-205ENST00000464541 RCVRNP35243 200 aa3.08□□□□□ -1.92
PTCD3-205ENST00000464541 PSMB2P49721 201 aa3.08□□□□□ -1.92
PTCD3-205ENST00000464541 SULT1A1P50225 295 aa3.08□□□□□ -1.92
PTCD3-205ENST00000464541 SULT1A2P50226 295 aa3.08□□□□□ -1.92
PTCD3-205ENST00000464541 ZNF138P52744 262 aa3.08□□□□□ -1.92
PTCD3-205ENST00000464541 S100A12P80511 92 aa3.08□□□□□ -1.92
PTCD3-205ENST00000464541 LAMTOR4Q0VGL1 99 aa3.08□□□□□ -1.92
PTCD3-205ENST00000464541 OR1Q1Q15612 314 aa3.08□□□□□ -1.92
PTCD3-205ENST00000464541 DNLZQ5SXM8 178 aa3.08□□□□□ -1.92
PTCD3-205ENST00000464541 HACD4Q5VWC8 232 aa3.08□□□□□ -1.92
PTCD3-205ENST00000464541 TNFAIP8L2Q6P589 184 aaPredicted RBP3.08□□□□□ -1.92
PTCD3-205ENST00000464541 CEMP1Q6PRD7 247 aaPredicted RBP3.08□□□□□ -1.92
PTCD3-205ENST00000464541 CASP12Q6UXS9 341 aa3.08□□□□□ -1.92
PTCD3-205ENST00000464541 FAM19A5Q7Z5A7 132 aaPredicted RBP3.08□□□□□ -1.92
PTCD3-205ENST00000464541 TAC4Q86UU9 113 aa3.08□□□□□ -1.92
PTCD3-205ENST00000464541 OR6N1Q8NGY5 312 aa3.08□□□□□ -1.92
PTCD3-205ENST00000464541 OR10J6PQ8NGY7 276 aa3.08□□□□□ -1.92
PTCD3-205ENST00000464541 PIFOQ8TCI5 191 aa3.08□□□□□ -1.92
PTCD3-205ENST00000464541 C15orf40Q8WUR7 153 aa3.08□□□□□ -1.92
PTCD3-205ENST00000464541 HAUS1Q96CS2 278 aa3.08□□□□□ -1.92
PTCD3-205ENST00000464541 TMA16Q96EY4 203 aaKnown RBP3.08□□□□□ -1.92
PTCD3-205ENST00000464541 IMP4Q96G21 291 aaKnown RBP3.08□□□□□ -1.92
PTCD3-205ENST00000464541 PHB2Q99623 299 aa3.08□□□□□ -1.92
PTCD3-205ENST00000464541 DOK1Q99704 481 aa3.08□□□□□ -1.92
PTCD3-205ENST00000464541 MAP1LC3AQ9H492 121 aa3.08□□□□□ -1.92
PTCD3-205ENST00000464541 C12orf4Q9NQ89 552 aa3.08□□□□□ -1.92
PTCD3-205ENST00000464541 RBM22Q9NW64 420 aaKnown RBP eCLIP3.08□□□□□ -1.92
PTCD3-205ENST00000464541 SIGLEC9Q9Y336 463 aa3.08□□□□□ -1.92
PTCD3-205ENST00000464541 MMACHCQ9Y4U1 282 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms