RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 BRS3P32247 399 aa11.52□□□□□ -0.57
SNRNP40-203ENST00000463988 VDAC2P45880 294 aaPredicted RBP11.52□□□□□ -0.57
SNRNP40-203ENST00000463988 GLIPR1P48060 266 aa11.52□□□□□ -0.57
SNRNP40-203ENST00000463988 ARHGDIBP52566 201 aa11.52□□□□□ -0.57
SNRNP40-203ENST00000463988 AESQ08117 197 aa11.52□□□□□ -0.57
SNRNP40-203ENST00000463988 RAB40BQ12829 278 aa11.52□□□□□ -0.57
SNRNP40-203ENST00000463988 KPNB1Q14974 876 aaKnown RBP11.52□□□□□ -0.57
SNRNP40-203ENST00000463988 NSUN5P1Q3KNT7 163 aa11.52□□□□□ -0.57
SNRNP40-203ENST00000463988 PRAMEF5Q5TYX0 476 aa11.52□□□□□ -0.57
SNRNP40-203ENST00000463988 HIST2H2BDQ6DRA6 164 aa11.52□□□□□ -0.57
SNRNP40-203ENST00000463988 Q6P435 159 aa11.52□□□□□ -0.57
SNRNP40-203ENST00000463988 RNF144BQ7Z419 303 aa11.52□□□□□ -0.57
SNRNP40-203ENST00000463988 LHFPL3Q86UP9 236 aa11.52□□□□□ -0.57
SNRNP40-203ENST00000463988 OR4F17Q8NGA8 305 aa11.52□□□□□ -0.57
SNRNP40-203ENST00000463988 OR5D18Q8NGL1 313 aa11.52□□□□□ -0.57
SNRNP40-203ENST00000463988 SPACA5Q96QH8 159 aa11.52□□□□□ -0.57
SNRNP40-203ENST00000463988 OR4F4Q96R69 305 aa11.52□□□□□ -0.57
SNRNP40-203ENST00000463988 OCSTAMPQ9BR26 566 aa11.52□□□□□ -0.57
SNRNP40-203ENST00000463988 ZNF649Q9BS31 505 aa11.52□□□□□ -0.57
SNRNP40-203ENST00000463988 NCOR1P1Q9H4R4 102 aa11.52□□□□□ -0.57
SNRNP40-203ENST00000463988 LIN7BQ9HAP6 207 aa11.52□□□□□ -0.57
SNRNP40-203ENST00000463988 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.52□□□□□ -0.57
SNRNP40-203ENST00000463988 MYRFQ9Y2G1 1151 aa11.52□□□□□ -0.57
SNRNP40-203ENST00000463988 ADARB2-AS1A8MUL3 147 aa11.51□□□□□ -0.57
SNRNP40-203ENST00000463988 SLC33A1O00400 549 aaPredicted RBP11.51□□□□□ -0.57
SNRNP40-203ENST00000463988 DEGS1O15121 323 aa11.51□□□□□ -0.57
SNRNP40-203ENST00000463988 ZFPL1O95159 310 aa11.51□□□□□ -0.57
SNRNP40-203ENST00000463988 CCDC159P0C7I6 412 aa11.51□□□□□ -0.57
SNRNP40-203ENST00000463988 TMEM225BP0DP42 221 aa11.51□□□□□ -0.57
SNRNP40-203ENST00000463988 CEACAM3P40198 252 aa11.51□□□□□ -0.57
SNRNP40-203ENST00000463988 PTGFRP43088 359 aa11.51□□□□□ -0.57
SNRNP40-203ENST00000463988 MTNR1BP49286 362 aa11.51□□□□□ -0.57
SNRNP40-203ENST00000463988 ZP1P60852 638 aa11.51□□□□□ -0.57
SNRNP40-203ENST00000463988 KISS1Q15726 138 aa11.51□□□□□ -0.57
SNRNP40-203ENST00000463988 ARSJQ5FYB0 599 aaPredicted RBP11.51□□□□□ -0.57
SNRNP40-203ENST00000463988 ELP2Q6IA86 826 aa11.51□□□□□ -0.57
SNRNP40-203ENST00000463988 Q6ZS46 218 aa11.51□□□□□ -0.57
SNRNP40-203ENST00000463988 REC114Q7Z4M0 266 aa11.51□□□□□ -0.57
SNRNP40-203ENST00000463988 OR4D6Q8NGJ1 314 aa11.51□□□□□ -0.57
SNRNP40-203ENST00000463988 OR5AK2Q8NH90 309 aa11.51□□□□□ -0.57
SNRNP40-203ENST00000463988 CPNE2Q96FN4 548 aaPredicted RBP11.51□□□□□ -0.57
SNRNP40-203ENST00000463988 COQ2Q96H96 371 aa11.51□□□□□ -0.57
SNRNP40-203ENST00000463988 CITED2Q99967 270 aaPredicted RBP11.51□□□□□ -0.57
SNRNP40-203ENST00000463988 C9orf16Q9BUW7 83 aa11.51□□□□□ -0.57
SNRNP40-203ENST00000463988 ISG20L2Q9H9L3 353 aaKnown RBP11.51□□□□□ -0.57
SNRNP40-203ENST00000463988 MRPS18AQ9NVS2 196 aaKnown RBP11.51□□□□□ -0.57
SNRNP40-203ENST00000463988 ERVK13-1Q9NX77 482 aa11.51□□□□□ -0.57
SNRNP40-203ENST00000463988 OR6C3Q9NZP0 311 aa11.51□□□□□ -0.57
SNRNP40-203ENST00000463988 AASSQ9UDR5 926 aa11.51□□□□□ -0.57
SNRNP40-203ENST00000463988 ZNF729A6NN14 1252 aaPredicted RBP11.5□□□□□ -0.57
SNRNP40-203ENST00000463988 OOSP1A8MZH6 123 aa11.5□□□□□ -0.57
SNRNP40-203ENST00000463988 HCKP08631 526 aa11.5□□□□□ -0.57
SNRNP40-203ENST00000463988 PRRX1P54821 245 aa11.5□□□□□ -0.57
SNRNP40-203ENST00000463988 SCN1BQ07699 218 aa11.5□□□□□ -0.57
SNRNP40-203ENST00000463988 CDK5R1Q15078 307 aa11.5□□□□□ -0.57
SNRNP40-203ENST00000463988 KRBOX4Q5JUW0 171 aa11.5□□□□□ -0.57
SNRNP40-203ENST00000463988 BAIAP2L2Q6UXY1 529 aa11.5□□□□□ -0.57
SNRNP40-203ENST00000463988 LYG1Q8N1E2 194 aa11.5□□□□□ -0.57
SNRNP40-203ENST00000463988 PXT1Q8NFP0 134 aa11.5□□□□□ -0.57
SNRNP40-203ENST00000463988 CAPSLQ8WWF8 208 aa11.5□□□□□ -0.57
SNRNP40-203ENST00000463988 STMN2Q93045 179 aa11.5□□□□□ -0.57
SNRNP40-203ENST00000463988 R3HDM4Q96D70 268 aa11.5□□□□□ -0.57
SNRNP40-203ENST00000463988 MMP28Q9H239 520 aa11.5□□□□□ -0.57
SNRNP40-203ENST00000463988 DHDHQ9UQ10 334 aa11.5□□□□□ -0.57
SNRNP40-203ENST00000463988 RPL36Q9Y3U8 105 aaKnown RBP11.5□□□□□ -0.57
SNRNP40-203ENST00000463988 KBTBD11-OT1A0A1B0GTJ5 212 aa11.49□□□□□ -0.57
SNRNP40-203ENST00000463988 E9PI62 339 aa11.49□□□□□ -0.57
SNRNP40-203ENST00000463988 LY6LH3BQJ8 138 aa11.49□□□□□ -0.57
SNRNP40-203ENST00000463988 BUB1B-PAK6H3BSN5 160 aa11.49□□□□□ -0.57
SNRNP40-203ENST00000463988 TOR1AO14656 332 aa11.49□□□□□ -0.57
SNRNP40-203ENST00000463988 OR2F2O95006 317 aa11.49□□□□□ -0.57
SNRNP40-203ENST00000463988 CGB3P0DN86 165 aa11.49□□□□□ -0.57
SNRNP40-203ENST00000463988 CGB7P0DN87 165 aa11.49□□□□□ -0.57
SNRNP40-203ENST00000463988 GDNFP39905 211 aa11.49□□□□□ -0.57
SNRNP40-203ENST00000463988 GBX2P52951 348 aaPredicted RBP11.49□□□□□ -0.57
SNRNP40-203ENST00000463988 CD83Q01151 205 aa11.49□□□□□ -0.57
SNRNP40-203ENST00000463988 PAX5Q02548 391 aa11.49□□□□□ -0.57
SNRNP40-203ENST00000463988 HLA-DRB5Q30154 266 aa11.49□□□□□ -0.57
SNRNP40-203ENST00000463988 KLHL22Q53GT1 634 aa11.49□□□□□ -0.57
SNRNP40-203ENST00000463988 FBLN7Q53RD9 439 aa11.49□□□□□ -0.57
SNRNP40-203ENST00000463988 TPTE2P1Q5T6R2 138 aa11.49□□□□□ -0.57
SNRNP40-203ENST00000463988 ZNF691Q5VV52 312 aa11.49□□□□□ -0.57
SNRNP40-203ENST00000463988 CCDC144NLQ6NUI1 221 aa11.49□□□□□ -0.57
SNRNP40-203ENST00000463988 ZNF529Q6P280 563 aa11.49□□□□□ -0.57
SNRNP40-203ENST00000463988 CCDC121Q6ZUS5 278 aa11.49□□□□□ -0.57
SNRNP40-203ENST00000463988 ZNF565Q8N9K5 539 aa11.49□□□□□ -0.57
SNRNP40-203ENST00000463988 Q8NFD4 153 aa11.49□□□□□ -0.57
SNRNP40-203ENST00000463988 OR5AU1Q8NGC0 362 aa11.49□□□□□ -0.57
SNRNP40-203ENST00000463988 OR51T1Q8NGJ9 327 aa11.49□□□□□ -0.57
SNRNP40-203ENST00000463988 OR5M11Q96RB7 305 aa11.49□□□□□ -0.57
SNRNP40-203ENST00000463988 JAM3Q9BX67 310 aa11.49□□□□□ -0.57
SNRNP40-203ENST00000463988 LINC00574Q9H8X3 128 aa11.49□□□□□ -0.57
SNRNP40-203ENST00000463988 ZNF286AQ9HBT8 521 aa11.49□□□□□ -0.57
SNRNP40-203ENST00000463988 AMBNQ9NP70 447 aa11.49□□□□□ -0.57
SNRNP40-203ENST00000463988 LOC100130705A0A1B0GUX0 176 aa11.48□□□□□ -0.57
SNRNP40-203ENST00000463988 M0QZK8 103 aa11.48□□□□□ -0.57
SNRNP40-203ENST00000463988 MAGEB3O15480 346 aa11.48□□□□□ -0.57
SNRNP40-203ENST00000463988 RAB3AP20336 220 aa11.48□□□□□ -0.57
SNRNP40-203ENST00000463988 KCNJ3P48549 501 aa11.48□□□□□ -0.57
SNRNP40-203ENST00000463988 IL13RA2Q14627 380 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms