RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 FAM172BPA6NC97 362 aa12.29□□□□□ -0.44
SKA3-204ENST00000462482 SNTNA6NMZ2 147 aa12.29□□□□□ -0.44
SKA3-204ENST00000462482 DEGS1O15121 323 aa12.29□□□□□ -0.44
SKA3-204ENST00000462482 KDM4BO94953 1096 aa12.29□□□□□ -0.44
SKA3-204ENST00000462482 ISG15P05161 165 aa12.29□□□□□ -0.44
SKA3-204ENST00000462482 RPSAP08865 295 aaKnown RBP12.29□□□□□ -0.44
SKA3-204ENST00000462482 CD34P28906 385 aa12.29□□□□□ -0.44
SKA3-204ENST00000462482 OR3A4PP47883 348 aa12.29□□□□□ -0.44
SKA3-204ENST00000462482 CCR9P51686 369 aa12.29□□□□□ -0.44
SKA3-204ENST00000462482 ZNF85Q03923 595 aa12.29□□□□□ -0.44
SKA3-204ENST00000462482 HLA-DRB5Q30154 266 aa12.29□□□□□ -0.44
SKA3-204ENST00000462482 DEFB121Q5J5C9 76 aa12.29□□□□□ -0.44
SKA3-204ENST00000462482 TPTE2P1Q5T6R2 138 aa12.29□□□□□ -0.44
SKA3-204ENST00000462482 SAXO1Q8IYX7 474 aa12.29□□□□□ -0.44
SKA3-204ENST00000462482 OR51D1Q8NGF3 324 aa12.29□□□□□ -0.44
SKA3-204ENST00000462482 OR13C9Q8NGT0 318 aa12.29□□□□□ -0.44
SKA3-204ENST00000462482 TRUB1Q8WWH5 349 aaKnown RBP12.29□□□□□ -0.44
SKA3-204ENST00000462482 RPEQ96AT9 228 aa12.29□□□□□ -0.44
SKA3-204ENST00000462482 MBOAT4Q96T53 435 aa12.29□□□□□ -0.44
SKA3-204ENST00000462482 OSBPL10Q9BXB5 764 aa12.29□□□□□ -0.44
SKA3-204ENST00000462482 GABARAPL3Q9BY60 117 aa12.29□□□□□ -0.44
SKA3-204ENST00000462482 COMMD4Q9H0A8 199 aa12.29□□□□□ -0.44
SKA3-204ENST00000462482 ZNF729A6NN14 1252 aaPredicted RBP12.28□□□□□ -0.44
SKA3-204ENST00000462482 E9PQ18 207 aa12.28□□□□□ -0.44
SKA3-204ENST00000462482 BUB1B-PAK6H3BSN5 160 aa12.28□□□□□ -0.44
SKA3-204ENST00000462482 SLC16A6O15403 523 aa12.28□□□□□ -0.44
SKA3-204ENST00000462482 IGLV1-47P01700 117 aa12.28□□□□□ -0.44
SKA3-204ENST00000462482 MT-ND2P03891 347 aa12.28□□□□□ -0.44
SKA3-204ENST00000462482 CSN2P05814 226 aa12.28□□□□□ -0.44
SKA3-204ENST00000462482 HCKP08631 526 aa12.28□□□□□ -0.44
SKA3-204ENST00000462482 TMEM225BP0DP42 221 aa12.28□□□□□ -0.44
SKA3-204ENST00000462482 DBTP11182 482 aaKnown RBP12.28□□□□□ -0.44
SKA3-204ENST00000462482 NFYBP25208 207 aa12.28□□□□□ -0.44
SKA3-204ENST00000462482 LMO1P25800 156 aa12.28□□□□□ -0.44
SKA3-204ENST00000462482 POLR2IP36954 125 aaKnown RBP12.28□□□□□ -0.44
SKA3-204ENST00000462482 ISL1P61371 349 aa12.28□□□□□ -0.44
SKA3-204ENST00000462482 VAX1Q5SQQ9 334 aa12.28□□□□□ -0.44
SKA3-204ENST00000462482 ZNF565Q8N9K5 539 aa12.28□□□□□ -0.44
SKA3-204ENST00000462482 OR5D18Q8NGL1 313 aa12.28□□□□□ -0.44
SKA3-204ENST00000462482 TOMM40LQ969M1 308 aa12.28□□□□□ -0.44
SKA3-204ENST00000462482 RNFT2Q96EX2 444 aa12.28□□□□□ -0.44
SKA3-204ENST00000462482 CPNE2Q96FN4 548 aaPredicted RBP12.28□□□□□ -0.44
SKA3-204ENST00000462482 CENPNQ96H22 339 aaPredicted RBP12.28□□□□□ -0.44
SKA3-204ENST00000462482 HRASLS5Q96KN8 279 aa12.28□□□□□ -0.44
SKA3-204ENST00000462482 ZNF286AQ9HBT8 521 aa12.28□□□□□ -0.44
SKA3-204ENST00000462482 FRRS1LQ9P0K9 344 aa12.28□□□□□ -0.44
SKA3-204ENST00000462482 OAZ3Q9UMX2 235 aa12.28□□□□□ -0.44
SKA3-204ENST00000462482 MOB4Q9Y3A3 225 aa12.28□□□□□ -0.44
SKA3-204ENST00000462482 HSPE1-MOB4S4R3N1 261 aa12.28□□□□□ -0.44
SKA3-204ENST00000462482 J3QLW9 94 aa12.27□□□□□ -0.45
SKA3-204ENST00000462482 ZNF19P17023 458 aa12.27□□□□□ -0.45
SKA3-204ENST00000462482 ATXN7L3Q14CW9 347 aaPredicted RBP12.27□□□□□ -0.45
SKA3-204ENST00000462482 TCTEX1D4Q5JR98 221 aa12.27□□□□□ -0.45
SKA3-204ENST00000462482 MEDAGQ5VYS4 303 aa12.27□□□□□ -0.45
SKA3-204ENST00000462482 FDX2Q6P4F2 183 aa12.27□□□□□ -0.45
SKA3-204ENST00000462482 BAIAP2L2Q6UXY1 529 aa12.27□□□□□ -0.45
SKA3-204ENST00000462482 OSR2Q8N2R0 312 aa12.27□□□□□ -0.45
SKA3-204ENST00000462482 OR9G1Q8NH87 305 aa12.27□□□□□ -0.45
SKA3-204ENST00000462482 SPACA5Q96QH8 159 aa12.27□□□□□ -0.45
SKA3-204ENST00000462482 ZCCHC4Q9H5U6 513 aa12.27□□□□□ -0.45
SKA3-204ENST00000462482 IGKV1-12A0A0C4DH73 117 aa12.26□□□□□ -0.45
SKA3-204ENST00000462482 PSMB11A5LHX3 300 aa12.26□□□□□ -0.45
SKA3-204ENST00000462482 SAC3D1A6NKF1 404 aa12.26□□□□□ -0.45
SKA3-204ENST00000462482 MAGEB3O15480 346 aa12.26□□□□□ -0.45
SKA3-204ENST00000462482 CIB2O75838 187 aa12.26□□□□□ -0.45
SKA3-204ENST00000462482 IGKV1D-12P01611 117 aa12.26□□□□□ -0.45
SKA3-204ENST00000462482 C21orf33P30042 268 aaPredicted RBP12.26□□□□□ -0.45
SKA3-204ENST00000462482 GLP1RP43220 463 aa12.26□□□□□ -0.45
SKA3-204ENST00000462482 HES1Q14469 280 aa12.26□□□□□ -0.45
SKA3-204ENST00000462482 ACBD7Q8N6N7 88 aa12.26□□□□□ -0.45
SKA3-204ENST00000462482 OR5D14Q8NGL3 314 aa12.26□□□□□ -0.45
SKA3-204ENST00000462482 ZNF649Q9BS31 505 aa12.26□□□□□ -0.45
SKA3-204ENST00000462482 MCRIP2Q9BUT9 160 aaKnown RBP12.26□□□□□ -0.45
SKA3-204ENST00000462482 BARHL1Q9BZE3 327 aa12.26□□□□□ -0.45
SKA3-204ENST00000462482 ZMAT5Q9UDW3 170 aaKnown RBP12.26□□□□□ -0.45
SKA3-204ENST00000462482 PLXNB1O43157 2135 aa12.25□□□□□ -0.45
SKA3-204ENST00000462482 NOTCH3Q9UM47 2321 aa12.25□□□□□ -0.45
SKA3-204ENST00000462482 MEIKINA0A087WXM9 373 aa12.25□□□□□ -0.45
SKA3-204ENST00000462482 A0A087X0M5 115 aa12.25□□□□□ -0.45
SKA3-204ENST00000462482 KBTBD11-OT1A0A1B0GTJ5 212 aa12.25□□□□□ -0.45
SKA3-204ENST00000462482 A0A1B0GX30 115 aa12.25□□□□□ -0.45
SKA3-204ENST00000462482 SH2D7A6NKC9 451 aaPredicted RBP12.25□□□□□ -0.45
SKA3-204ENST00000462482 NUDT19A8MXV4 375 aa12.25□□□□□ -0.45
SKA3-204ENST00000462482 K7EIL1 84 aa12.25□□□□□ -0.45
SKA3-204ENST00000462482 SLC33A1O00400 549 aaPredicted RBP12.25□□□□□ -0.45
SKA3-204ENST00000462482 ATP5HO75947 161 aa12.25□□□□□ -0.45
SKA3-204ENST00000462482 GDNFP39905 211 aa12.25□□□□□ -0.45
SKA3-204ENST00000462482 MTNR1BP49286 362 aa12.25□□□□□ -0.45
SKA3-204ENST00000462482 NANOS3P60323 173 aaKnown RBP12.25□□□□□ -0.45
SKA3-204ENST00000462482 DCTN2Q13561 401 aaKnown RBP12.25□□□□□ -0.45
SKA3-204ENST00000462482 ALKBH1Q13686 389 aaKnown RBP12.25□□□□□ -0.45
SKA3-204ENST00000462482 PAN3Q58A45 887 aaKnown RBP12.25□□□□□ -0.45
SKA3-204ENST00000462482 THNSL2Q86YJ6 484 aa12.25□□□□□ -0.45
SKA3-204ENST00000462482 SERPINA12Q8IW75 414 aa12.25□□□□□ -0.45
SKA3-204ENST00000462482 C4orf36Q96KX1 117 aa12.25□□□□□ -0.45
SKA3-204ENST00000462482 H0YJX3 145 aa12.24□□□□□ -0.45
SKA3-204ENST00000462482 LY6LH3BQJ8 138 aa12.24□□□□□ -0.45
SKA3-204ENST00000462482 SULT1B1O43704 296 aa12.24□□□□□ -0.45
SKA3-204ENST00000462482 SLC35B1P78383 322 aa12.24□□□□□ -0.45
SKA3-204ENST00000462482 MADCAM1Q13477 382 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms