RNA–Protein interactions for RNA: ENST00000462207.1

PBRM1-219, Transcript of polybromo 1, humanhuman

TSL 2

Gene PBRM1, Length 1,921 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-219ENST00000462207 PECRQ9BY49 303 aa11.25□□□□□ -0.61
PBRM1-219ENST00000462207 CHST6Q9GZX3 395 aa11.25□□□□□ -0.61
PBRM1-219ENST00000462207 PPA2Q9H2U2 334 aa11.25□□□□□ -0.61
PBRM1-219ENST00000462207 BARX1Q9HBU1 254 aaPredicted RBP11.25□□□□□ -0.61
PBRM1-219ENST00000462207 BEX4Q9NWD9 120 aaPredicted RBP11.25□□□□□ -0.61
PBRM1-219ENST00000462207 RCC2Q9P258 522 aaKnown RBP11.25□□□□□ -0.61
PBRM1-219ENST00000462207 UBE2QL1A1L167 161 aa11.25□□□□□ -0.61
PBRM1-219ENST00000462207 FAM90A10PA6NDY2 464 aa11.25□□□□□ -0.61
PBRM1-219ENST00000462207 FAM90A18PA6NE21 464 aa11.25□□□□□ -0.61
PBRM1-219ENST00000462207 FAM90A16PA6NEW6 464 aa11.25□□□□□ -0.61
PBRM1-219ENST00000462207 TMEM235A6NFC5 223 aa11.25□□□□□ -0.61
PBRM1-219ENST00000462207 FAM90A20PA6NIJ5 464 aa11.25□□□□□ -0.61
PBRM1-219ENST00000462207 FAM90A8PA6NJQ4 464 aa11.25□□□□□ -0.61
PBRM1-219ENST00000462207 FAM90A7PA6NKC0 464 aa11.25□□□□□ -0.61
PBRM1-219ENST00000462207 FAM90A22PA8MWA6 464 aa11.25□□□□□ -0.61
PBRM1-219ENST00000462207 FAM90A12PA8MX19 464 aa11.25□□□□□ -0.61
PBRM1-219ENST00000462207 FAM90A5PA8MXJ8 464 aa11.25□□□□□ -0.61
PBRM1-219ENST00000462207 FAM90A23PA8MXZ1 464 aa11.25□□□□□ -0.61
PBRM1-219ENST00000462207 MFNGO00587 321 aa11.25□□□□□ -0.61
PBRM1-219ENST00000462207 CHRM2P08172 466 aa11.25□□□□□ -0.61
PBRM1-219ENST00000462207 FAM90A15PP0C7V4 464 aa11.25□□□□□ -0.61
PBRM1-219ENST00000462207 FAM90A13PP0C7W8 464 aa11.25□□□□□ -0.61
PBRM1-219ENST00000462207 FAM90A14PP0C7W9 464 aa11.25□□□□□ -0.61
PBRM1-219ENST00000462207 FAM90A24PP0C7X0 464 aa11.25□□□□□ -0.61
PBRM1-219ENST00000462207 HIST1H1DP16402 221 aaKnown RBP11.25□□□□□ -0.61
PBRM1-219ENST00000462207 TALDO1P37837 337 aa11.25□□□□□ -0.61
PBRM1-219ENST00000462207 MDH2P40926 338 aaKnown RBP11.25□□□□□ -0.61
PBRM1-219ENST00000462207 PDLIM4P50479 330 aa11.25□□□□□ -0.61
PBRM1-219ENST00000462207 RNASE12Q5GAN4 147 aaKnown RBP11.25□□□□□ -0.61
PBRM1-219ENST00000462207 PEG10Q86TG7 708 aaKnown RBP11.25□□□□□ -0.61
PBRM1-219ENST00000462207 LINC00596Q86U02 117 aa11.25□□□□□ -0.61
PBRM1-219ENST00000462207 ASCC1Q8N9N2 400 aaKnown RBP11.25□□□□□ -0.61
PBRM1-219ENST00000462207 ZNRF1Q8ND25 227 aa11.25□□□□□ -0.61
PBRM1-219ENST00000462207 CAPSLQ8WWF8 208 aa11.25□□□□□ -0.61
PBRM1-219ENST00000462207 NEDD4LQ96PU5 975 aa11.25□□□□□ -0.61
PBRM1-219ENST00000462207 FAAP24Q9BTP7 215 aa11.25□□□□□ -0.61
PBRM1-219ENST00000462207 BPESC1Q9GZL8 116 aa11.25□□□□□ -0.61
PBRM1-219ENST00000462207 DIABLOQ9NR28 239 aa11.25□□□□□ -0.61
PBRM1-219ENST00000462207 CTSZQ9UBR2 303 aa11.25□□□□□ -0.61
PBRM1-219ENST00000462207 MAB21L2Q9Y586 359 aa11.25□□□□□ -0.61
PBRM1-219ENST00000462207 TNFRSF13BO14836 293 aaPredicted RBP11.24□□□□□ -0.61
PBRM1-219ENST00000462207 FCN3O75636 299 aa11.24□□□□□ -0.61
PBRM1-219ENST00000462207 HLA-DQB1P01920 261 aa11.24□□□□□ -0.61
PBRM1-219ENST00000462207 FUT3P21217 361 aa11.24□□□□□ -0.61
PBRM1-219ENST00000462207 TMEM33P57088 247 aa11.24□□□□□ -0.61
PBRM1-219ENST00000462207 IL18Q14116 193 aa11.24□□□□□ -0.61
PBRM1-219ENST00000462207 ZNF79Q15937 498 aa11.24□□□□□ -0.61
PBRM1-219ENST00000462207 ZNF260Q3ZCT1 412 aa11.24□□□□□ -0.61
PBRM1-219ENST00000462207 CDNFQ49AH0 187 aa11.24□□□□□ -0.61
PBRM1-219ENST00000462207 PAN3Q58A45 887 aaKnown RBP11.24□□□□□ -0.61
PBRM1-219ENST00000462207 STEAP3Q658P3 488 aa11.24□□□□□ -0.61
PBRM1-219ENST00000462207 FAM131AQ6UXB0 335 aa11.24□□□□□ -0.61
PBRM1-219ENST00000462207 ZNF788Q6ZQV5 615 aa11.24□□□□□ -0.61
PBRM1-219ENST00000462207 C17orf107Q6ZR85 190 aa11.24□□□□□ -0.61
PBRM1-219ENST00000462207 SLC7A5P1Q8MH63 180 aa11.24□□□□□ -0.61
PBRM1-219ENST00000462207 OR4S1Q8NGB4 309 aa11.24□□□□□ -0.61
PBRM1-219ENST00000462207 RAB1CQ92928 201 aa11.24□□□□□ -0.61
PBRM1-219ENST00000462207 TIMD4Q96H15 378 aa11.24□□□□□ -0.61
PBRM1-219ENST00000462207 ABHD1Q96SE0 405 aa11.24□□□□□ -0.61
PBRM1-219ENST00000462207 DPCDQ9BVM2 203 aaPredicted RBP11.24□□□□□ -0.61
PBRM1-219ENST00000462207 IFT22Q9H7X7 185 aa11.24□□□□□ -0.61
PBRM1-219ENST00000462207 MYOZ1Q9NP98 299 aaPredicted RBP11.24□□□□□ -0.61
PBRM1-219ENST00000462207 ING3Q9NXR8 418 aa11.24□□□□□ -0.61
PBRM1-219ENST00000462207 GLS2Q9UI32 602 aa11.24□□□□□ -0.61
PBRM1-219ENST00000462207 ZNF221Q9UK13 617 aa11.24□□□□□ -0.61
PBRM1-219ENST00000462207 RBMX2Q9Y388 322 aaKnown RBP11.24□□□□□ -0.61
PBRM1-219ENST00000462207 ANKRD17O75179 2603 aaKnown RBP11.23□□□□□ -0.61
PBRM1-219ENST00000462207 FABP12A6NFH5 140 aa11.23□□□□□ -0.61
PBRM1-219ENST00000462207 NKX6-3A6NJ46 265 aa11.23□□□□□ -0.61
PBRM1-219ENST00000462207 CEACAM18A8MTB9 384 aa11.23□□□□□ -0.61
PBRM1-219ENST00000462207 TMPRSS2O15393 492 aa11.23□□□□□ -0.61
PBRM1-219ENST00000462207 ADAM20O43506 726 aa11.23□□□□□ -0.61
PBRM1-219ENST00000462207 ZNF737O75373 536 aa11.23□□□□□ -0.61
PBRM1-219ENST00000462207 OR3A1P47881 315 aa11.23□□□□□ -0.61
PBRM1-219ENST00000462207 GUCA2AQ02747 115 aa11.23□□□□□ -0.61
PBRM1-219ENST00000462207 ATXN7L3Q14CW9 347 aaPredicted RBP11.23□□□□□ -0.61
PBRM1-219ENST00000462207 FAM189A2Q15884 450 aa11.23□□□□□ -0.61
PBRM1-219ENST00000462207 SPANXN2Q5MJ10 180 aa11.23□□□□□ -0.61
PBRM1-219ENST00000462207 RSBN1Q5VWQ0 802 aaPredicted RBP11.23□□□□□ -0.61
PBRM1-219ENST00000462207 CLEC2AQ6UVW9 174 aa11.23□□□□□ -0.61
PBRM1-219ENST00000462207 Q6ZTK2 550 aa11.23□□□□□ -0.61
PBRM1-219ENST00000462207 NEK7Q8TDX7 302 aa11.23□□□□□ -0.61
PBRM1-219ENST00000462207 C10orf105Q8TEF2 133 aa11.23□□□□□ -0.61
PBRM1-219ENST00000462207 FAM168AQ92567 244 aa11.23□□□□□ -0.61
PBRM1-219ENST00000462207 SDSLQ96GA7 329 aa11.23□□□□□ -0.61
PBRM1-219ENST00000462207 SOSTQ9BQB4 213 aa11.23□□□□□ -0.61
PBRM1-219ENST00000462207 HDHD3Q9BSH5 251 aaPredicted RBP11.23□□□□□ -0.61
PBRM1-219ENST00000462207 CCDC32Q9BV29 185 aa11.23□□□□□ -0.61
PBRM1-219ENST00000462207 ZNF665Q9H7R5 613 aa11.23□□□□□ -0.61
PBRM1-219ENST00000462207 AUNIPQ9H7T9 357 aa11.23□□□□□ -0.61
PBRM1-219ENST00000462207 PLEKHJ1Q9NW61 149 aa11.23□□□□□ -0.61
PBRM1-219ENST00000462207 NAV2Q8IVL1 2488 aa11.23□□□□□ -0.61
PBRM1-219ENST00000462207 CSMD2Q7Z408 3487 aa11.23□□□□□ -0.61
PBRM1-219ENST00000462207 IGHV4-30-2A0A087WSY4 118 aa11.23□□□□□ -0.61
PBRM1-219ENST00000462207 A0A0A6YYH2 397 aa11.23□□□□□ -0.61
PBRM1-219ENST00000462207 A6NJ64 397 aa11.23□□□□□ -0.61
PBRM1-219ENST00000462207 SCGNO76038 276 aa11.23□□□□□ -0.61
PBRM1-219ENST00000462207 LMO1P25800 156 aa11.23□□□□□ -0.61
PBRM1-219ENST00000462207 GIFP27352 417 aa11.23□□□□□ -0.61
PBRM1-219ENST00000462207 ETV6P41212 452 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms