RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-204ENST00000461522 PCM1Q15154 2024 aa3.07□□□□□ -1.92
UBA3-204ENST00000461522 TPRP12270 2363 aaKnown RBP3.07□□□□□ -1.92
UBA3-204ENST00000461522 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.06□□□□□ -1.92
UBA3-204ENST00000461522 A0A0A6YYD5 115 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 A0A1B0GV90 55 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 FER1L5A0AVI2 2057 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 PQLC2LA1A4F0 135 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 GMNCA6NCL1 334 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 RPL37AP8A6NKH3 93 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 LRRC30A6NM36 301 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 EVPLLA8MZ36 301 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 NPIPA5E9PKD4 350 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 DCTN6O00399 190 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 BHLHE40O14503 412 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 SYT7O43581 403 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 EDF1O60869 148 aaKnown RBP3.06□□□□□ -1.92
UBA3-204ENST00000461522 SCRG1O75711 98 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 STK17BO94768 372 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 TNFSF15O95150 251 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 FAM107AO95990 144 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 HLA-HP01893 362 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 GAPDHP04406 335 aaKnown RBP3.06□□□□□ -1.92
UBA3-204ENST00000461522 ALDOBP05062 364 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 FBP1P09467 338 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 SMIM6P0DI80 62 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 LIPCP11150 499 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 CCL4P13236 92 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 PVRP15151 417 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 ATP5A1P25705 553 aaKnown RBP3.06□□□□□ -1.92
UBA3-204ENST00000461522 GNRHRP30968 328 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 ARR3P36575 388 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 YAP1P46937 504 aaKnown RBP3.06□□□□□ -1.92
UBA3-204ENST00000461522 CX3CR1P49238 355 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 PPOXP50336 477 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 RAB13P51153 203 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 DAP3P51398 398 aaKnown RBP3.06□□□□□ -1.92
UBA3-204ENST00000461522 EFNB2P52799 333 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 CLDN17P56750 224 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 VSX2P58304 361 aaPredicted RBP3.06□□□□□ -1.92
UBA3-204ENST00000461522 OR2B8PP59922 312 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 PPP1CAP62136 330 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 RANP62826 216 aaKnown RBP3.06□□□□□ -1.92
UBA3-204ENST00000461522 ERVK-8P63133 956 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 ELF3P78545 371 aaPredicted RBP3.06□□□□□ -1.92
UBA3-204ENST00000461522 TLE4Q04727 773 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 EMX2Q04743 252 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 MLLT11Q13015 90 aaPredicted RBP3.06□□□□□ -1.92
UBA3-204ENST00000461522 ACACAQ13085 2346 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 SELENBP1Q13228 472 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 EXOSC7Q15024 291 aaKnown RBP3.06□□□□□ -1.92
UBA3-204ENST00000461522 MAPK14Q16539 360 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 DGUOKQ16854 277 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 PGGHGQ32M88 737 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 CNPY1Q3B7I2 92 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 RBM48Q5RL73 367 aaKnown RBP3.06□□□□□ -1.92
UBA3-204ENST00000461522 RSBN1Q5VWQ0 802 aaPredicted RBP3.06□□□□□ -1.92
UBA3-204ENST00000461522 LEMD1Q68G75 181 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 CYB5R2Q6BCY4 276 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 TRIM40Q6P9F5 258 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 EPGNQ6UW88 154 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 ZNF836Q6ZNA1 936 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 OR2W3Q7Z3T1 314 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 NUFIP2Q7Z417 695 aaKnown RBP3.06□□□□□ -1.92
UBA3-204ENST00000461522 TMEM144Q7Z5S9 345 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 DND1Q8IYX4 353 aaKnown RBP3.06□□□□□ -1.92
UBA3-204ENST00000461522 LGI3Q8N145 548 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 C11orf42Q8N5U0 333 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 ACOT4Q8N9L9 421 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 HSD17B11Q8NBQ5 300 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 ZNF740Q8NDX6 193 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 LFNGQ8NES3 379 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 NOXO1Q8NFA2 376 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 STOML3Q8TAV4 291 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 FAM110BQ8TC76 370 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 RNASEH2CQ8TDP1 164 aaKnown RBP3.06□□□□□ -1.92
UBA3-204ENST00000461522 CEP192Q8TEP8 1941 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 CASTOR1Q8WTX7 329 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 DNAJC9Q8WXX5 260 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 APH1AQ96BI3 265 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 C12orf43Q96C57 262 aaKnown RBP3.06□□□□□ -1.92
UBA3-204ENST00000461522 SMIM12Q96EX1 92 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 ITCHQ96J02 903 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 RNF2Q99496 336 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 C2orf88Q9BSF0 95 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 MS4A8Q9BY19 250 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 ULBP3Q9BZM4 244 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 SLC19A3Q9BZV2 496 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 TLNRD1Q9H1K6 362 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 ANKRD19PQ9H560 264 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 TMEM138Q9NPI0 162 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 LHX9Q9NQ69 397 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 PAK1IP1Q9NWT1 392 aaPredicted RBP3.06□□□□□ -1.92
UBA3-204ENST00000461522 C1orf123Q9NWV4 160 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 VAPAQ9P0L0 249 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 GSKIPQ9P0R6 139 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 MIOXQ9UGB7 285 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 MRTO4Q9UKD2 239 aaKnown RBP3.06□□□□□ -1.92
UBA3-204ENST00000461522 NPIPA1Q9UND3 350 aa3.06□□□□□ -1.92
UBA3-204ENST00000461522 FARSAQ9Y285 508 aaKnown RBP3.06□□□□□ -1.92
UBA3-204ENST00000461522 TP53TG5Q9Y2B4 290 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms