RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 RELBQ01201 579 aa12.54□□□□□ -0.4
VARS-219ENST00000461328 MIDNQ504T8 468 aa12.54□□□□□ -0.4
VARS-219ENST00000461328 HCP5Q6MZN7 132 aa12.54□□□□□ -0.4
VARS-219ENST00000461328 GDPGP1Q6ZNW5 385 aa12.54□□□□□ -0.4
VARS-219ENST00000461328 OR13D1Q8NGV5 346 aa12.54□□□□□ -0.4
VARS-219ENST00000461328 ZNF184Q99676 751 aaPredicted RBP12.54□□□□□ -0.4
VARS-219ENST00000461328 ANKRD60Q9BZ19 345 aa12.54□□□□□ -0.4
VARS-219ENST00000461328 SLITRK2Q9H156 845 aa12.54□□□□□ -0.4
VARS-219ENST00000461328 METTL9Q9H1A3 318 aa12.54□□□□□ -0.4
VARS-219ENST00000461328 ING4Q9UNL4 249 aa12.54□□□□□ -0.4
VARS-219ENST00000461328 TRGV10A0A0A0MS01 117 aa12.53□□□□□ -0.4
VARS-219ENST00000461328 C17orf98A8MV24 154 aa12.53□□□□□ -0.4
VARS-219ENST00000461328 CLPXO76031 633 aa12.53□□□□□ -0.4
VARS-219ENST00000461328 CDRT1O95170 752 aa12.53□□□□□ -0.4
VARS-219ENST00000461328 RBP4P02753 201 aa12.53□□□□□ -0.4
VARS-219ENST00000461328 CSTBP04080 98 aaKnown RBP12.53□□□□□ -0.4
VARS-219ENST00000461328 FSTP19883 344 aa12.53□□□□□ -0.4
VARS-219ENST00000461328 MAPK3P27361 379 aaPredicted RBP12.53□□□□□ -0.4
VARS-219ENST00000461328 PTGFRP43088 359 aa12.53□□□□□ -0.4
VARS-219ENST00000461328 DLX6P56179 175 aa12.53□□□□□ -0.4
VARS-219ENST00000461328 RPS11P62280 158 aaKnown RBP eCLIP12.53□□□□□ -0.4
VARS-219ENST00000461328 DYNC1I2Q13409 638 aaKnown RBP12.53□□□□□ -0.4
VARS-219ENST00000461328 ATXN7L3Q14CW9 347 aaPredicted RBP12.53□□□□□ -0.4
VARS-219ENST00000461328 MED22Q15528 200 aa12.53□□□□□ -0.4
VARS-219ENST00000461328 TAF9Q16594 264 aa12.53□□□□□ -0.4
VARS-219ENST00000461328 PAN3Q58A45 887 aaKnown RBP12.53□□□□□ -0.4
VARS-219ENST00000461328 OLFML2AQ68BL7 652 aa12.53□□□□□ -0.4
VARS-219ENST00000461328 TCF23Q7RTU1 214 aa12.53□□□□□ -0.4
VARS-219ENST00000461328 JAGN1Q8N5M9 183 aa12.53□□□□□ -0.4
VARS-219ENST00000461328 THRSPQ92748 146 aa12.53□□□□□ -0.4
VARS-219ENST00000461328 CNBD2Q96M20 576 aa12.53□□□□□ -0.4
VARS-219ENST00000461328 CCDC90BQ9GZT6 254 aa12.53□□□□□ -0.4
VARS-219ENST00000461328 PAK1IP1Q9NWT1 392 aaPredicted RBP12.53□□□□□ -0.4
VARS-219ENST00000461328 VPREB3Q9UKI3 123 aa12.53□□□□□ -0.4
VARS-219ENST00000461328 TRAV8-7A0A075B6U6 113 aa12.52□□□□□ -0.41
VARS-219ENST00000461328 A0A0G2JK05 382 aa12.52□□□□□ -0.41
VARS-219ENST00000461328 CLPSL1A2RUU4 121 aa12.52□□□□□ -0.41
VARS-219ENST00000461328 SLC33A1O00400 549 aaPredicted RBP12.52□□□□□ -0.41
VARS-219ENST00000461328 ATP6V1G2O95670 118 aa12.52□□□□□ -0.41
VARS-219ENST00000461328 MAS1P04201 325 aa12.52□□□□□ -0.41
VARS-219ENST00000461328 ARG1P05089 322 aa12.52□□□□□ -0.41
VARS-219ENST00000461328 IGHV1-8P0DP01 117 aa12.52□□□□□ -0.41
VARS-219ENST00000461328 IGFBP3P17936 291 aaPredicted RBP12.52□□□□□ -0.41
VARS-219ENST00000461328 SERPINA2P20848 420 aa12.52□□□□□ -0.41
VARS-219ENST00000461328 ERP29P30040 261 aaKnown RBP12.52□□□□□ -0.41
VARS-219ENST00000461328 BDH1Q02338 343 aa12.52□□□□□ -0.41
VARS-219ENST00000461328 AESQ08117 197 aa12.52□□□□□ -0.41
VARS-219ENST00000461328 IL13RA2Q14627 380 aa12.52□□□□□ -0.41
VARS-219ENST00000461328 PIGYQ3MUY2 71 aa12.52□□□□□ -0.41
VARS-219ENST00000461328 KRBOX4Q5JUW0 171 aa12.52□□□□□ -0.41
VARS-219ENST00000461328 ELP2Q6IA86 826 aa12.52□□□□□ -0.41
VARS-219ENST00000461328 DHRS7BQ6IAN0 325 aaPredicted RBP12.52□□□□□ -0.41
VARS-219ENST00000461328 Q6P435 159 aa12.52□□□□□ -0.41
VARS-219ENST00000461328 C11orf42Q8N5U0 333 aa12.52□□□□□ -0.41
VARS-219ENST00000461328 BEND2Q8NDZ0 799 aa12.52□□□□□ -0.41
VARS-219ENST00000461328 OR5R1Q8NH85 324 aa12.52□□□□□ -0.41
VARS-219ENST00000461328 C17orf50Q8WW18 174 aa12.52□□□□□ -0.41
VARS-219ENST00000461328 WFDC12Q8WWY7 111 aa12.52□□□□□ -0.41
VARS-219ENST00000461328 SGCDQ92629 289 aa12.52□□□□□ -0.41
VARS-219ENST00000461328 DERL3Q96Q80 235 aa12.52□□□□□ -0.41
VARS-219ENST00000461328 CDCA4Q9BXL8 241 aa12.52□□□□□ -0.41
VARS-219ENST00000461328 GAL3ST2Q9H3Q3 398 aa12.52□□□□□ -0.41
VARS-219ENST00000461328 UBE2J1Q9Y385 318 aaPredicted RBP12.52□□□□□ -0.41
VARS-219ENST00000461328 TRBV5-7A0A0A0MS05 114 aa12.51□□□□□ -0.41
VARS-219ENST00000461328 ODAMA1E959 279 aa12.51□□□□□ -0.41
VARS-219ENST00000461328 MAGEA13PA6NCF6 341 aa12.51□□□□□ -0.41
VARS-219ENST00000461328 RGS10O43665 173 aa12.51□□□□□ -0.41
VARS-219ENST00000461328 CD1AP06126 327 aa12.51□□□□□ -0.41
VARS-219ENST00000461328 LMO1P25800 156 aa12.51□□□□□ -0.41
VARS-219ENST00000461328 TGFBR2P37173 567 aa12.51□□□□□ -0.41
VARS-219ENST00000461328 GLIPR1P48060 266 aa12.51□□□□□ -0.41
VARS-219ENST00000461328 SLC35A2P78381 396 aa12.51□□□□□ -0.41
VARS-219ENST00000461328 DOC2BQ14184 412 aa12.51□□□□□ -0.41
VARS-219ENST00000461328 SPHARQ15513 63 aa12.51□□□□□ -0.41
VARS-219ENST00000461328 SLC22A6Q4U2R8 563 aa12.51□□□□□ -0.41
VARS-219ENST00000461328 PRR31Q5SQ13 230 aa12.51□□□□□ -0.41
VARS-219ENST00000461328 RNLSQ5VYX0 342 aa12.51□□□□□ -0.41
VARS-219ENST00000461328 OSR2Q8N2R0 312 aa12.51□□□□□ -0.41
VARS-219ENST00000461328 OR5M11Q96RB7 305 aa12.51□□□□□ -0.41
VARS-219ENST00000461328 TMED9Q9BVK6 235 aa12.51□□□□□ -0.41
VARS-219ENST00000461328 ZNF696Q9H7X3 374 aa12.51□□□□□ -0.41
VARS-219ENST00000461328 PCDHB16Q9NRJ7 776 aa12.51□□□□□ -0.41
VARS-219ENST00000461328 FOXJ3Q9UPW0 622 aa12.51□□□□□ -0.41
VARS-219ENST00000461328 SESN1Q9Y6P5 492 aa12.51□□□□□ -0.41
VARS-219ENST00000461328 H3BUX3 64 aa12.5□□□□□ -0.41
VARS-219ENST00000461328 OR7C1O76099 320 aaPredicted RBP12.5□□□□□ -0.41
VARS-219ENST00000461328 CSN2P05814 226 aa12.5□□□□□ -0.41
VARS-219ENST00000461328 HSMCR30P0CW71 290 aa12.5□□□□□ -0.41
VARS-219ENST00000461328 GLP1RP43220 463 aa12.5□□□□□ -0.41
VARS-219ENST00000461328 LRRC75BQ2VPJ9 315 aa12.5□□□□□ -0.41
VARS-219ENST00000461328 PLA1AQ53H76 456 aa12.5□□□□□ -0.41
VARS-219ENST00000461328 PRAMEF5Q5TYX0 476 aa12.5□□□□□ -0.41
VARS-219ENST00000461328 AWAT2Q6E213 333 aa12.5□□□□□ -0.41
VARS-219ENST00000461328 UFD1Q92890 307 aa12.5□□□□□ -0.41
VARS-219ENST00000461328 MUL1Q969V5 352 aa12.5□□□□□ -0.41
VARS-219ENST00000461328 FOXRED1Q96CU9 486 aaPredicted RBP12.5□□□□□ -0.41
VARS-219ENST00000461328 SSX3Q99909 188 aa12.5□□□□□ -0.41
VARS-219ENST00000461328 IL36GQ9NZH8 169 aa12.5□□□□□ -0.41
VARS-219ENST00000461328 ST3GAL6Q9Y274 331 aa12.5□□□□□ -0.41
VARS-219ENST00000461328 MRPS28Q9Y2Q9 187 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms