RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 NR1H4Q96RI1 486 aaPredicted RBP10.89□□□□□ -0.67
RAB11FIP3-207ENST00000461009 ZNF747Q9BV97 191 aa10.89□□□□□ -0.67
RAB11FIP3-207ENST00000461009 IL36RNQ9UBH0 155 aa10.89□□□□□ -0.67
RAB11FIP3-207ENST00000461009 SF3B6Q9Y3B4 125 aaKnown RBP10.89□□□□□ -0.67
RAB11FIP3-207ENST00000461009 SIRPB1O00241 398 aa10.88□□□□□ -0.67
RAB11FIP3-207ENST00000461009 CCRL2O00421 344 aa10.88□□□□□ -0.67
RAB11FIP3-207ENST00000461009 OR2H2O95918 312 aa10.88□□□□□ -0.67
RAB11FIP3-207ENST00000461009 GTF2F2P13984 249 aa10.88□□□□□ -0.67
RAB11FIP3-207ENST00000461009 MMP9P14780 707 aa10.88□□□□□ -0.67
RAB11FIP3-207ENST00000461009 PSMB9P28065 219 aa10.88□□□□□ -0.67
RAB11FIP3-207ENST00000461009 PSMD7P51665 324 aa10.88□□□□□ -0.67
RAB11FIP3-207ENST00000461009 MEF2CQ06413 473 aaPredicted RBP10.88□□□□□ -0.67
RAB11FIP3-207ENST00000461009 IL13RA2Q14627 380 aa10.88□□□□□ -0.67
RAB11FIP3-207ENST00000461009 INSL4Q14641 139 aa10.88□□□□□ -0.67
RAB11FIP3-207ENST00000461009 DEFB112Q30KQ8 113 aa10.88□□□□□ -0.67
RAB11FIP3-207ENST00000461009 SLC22A6Q4U2R8 563 aa10.88□□□□□ -0.67
RAB11FIP3-207ENST00000461009 FAM27D1Q5T7N8 215 aa10.88□□□□□ -0.67
RAB11FIP3-207ENST00000461009 GLIPR1L1Q6UWM5 242 aa10.88□□□□□ -0.67
RAB11FIP3-207ENST00000461009 TMEM91Q6ZNR0 172 aa10.88□□□□□ -0.67
RAB11FIP3-207ENST00000461009 OR4M1Q8NGD0 313 aa10.88□□□□□ -0.67
RAB11FIP3-207ENST00000461009 OR10K1Q8NGX5 313 aa10.88□□□□□ -0.67
RAB11FIP3-207ENST00000461009 MUL1Q969V5 352 aa10.88□□□□□ -0.67
RAB11FIP3-207ENST00000461009 MRPS24Q96EL2 167 aaKnown RBP10.88□□□□□ -0.67
RAB11FIP3-207ENST00000461009 SIRPDQ9H106 197 aa10.88□□□□□ -0.67
RAB11FIP3-207ENST00000461009 GHRLQ9UBU3 117 aa10.88□□□□□ -0.67
RAB11FIP3-207ENST00000461009 ST3GAL6Q9Y274 331 aa10.88□□□□□ -0.67
RAB11FIP3-207ENST00000461009 MRPS28Q9Y2Q9 187 aaKnown RBP10.88□□□□□ -0.67
RAB11FIP3-207ENST00000461009 A0A1B0GUS0 222 aa10.87□□□□□ -0.67
RAB11FIP3-207ENST00000461009 hADV38S2A0JD32 116 aa10.87□□□□□ -0.67
RAB11FIP3-207ENST00000461009 TMEM82A0PJX8 343 aa10.87□□□□□ -0.67
RAB11FIP3-207ENST00000461009 MAGEA13PA6NCF6 341 aa10.87□□□□□ -0.67
RAB11FIP3-207ENST00000461009 HOXA3O43365 443 aaPredicted RBP10.87□□□□□ -0.67
RAB11FIP3-207ENST00000461009 TNFAIP8O95379 198 aa10.87□□□□□ -0.67
RAB11FIP3-207ENST00000461009 UBBP0CG47 229 aa10.87□□□□□ -0.67
RAB11FIP3-207ENST00000461009 SERPINA2P20848 420 aa10.87□□□□□ -0.67
RAB11FIP3-207ENST00000461009 GALP22466 123 aa10.87□□□□□ -0.67
RAB11FIP3-207ENST00000461009 ERP29P30040 261 aaKnown RBP10.87□□□□□ -0.67
RAB11FIP3-207ENST00000461009 FABP5Q01469 135 aa10.87□□□□□ -0.67
RAB11FIP3-207ENST00000461009 GUCA2AQ02747 115 aa10.87□□□□□ -0.67
RAB11FIP3-207ENST00000461009 NHLRC3Q5JS37 347 aa10.87□□□□□ -0.67
RAB11FIP3-207ENST00000461009 TMEM200BQ69YZ2 307 aa10.87□□□□□ -0.67
RAB11FIP3-207ENST00000461009 AWAT2Q6E213 333 aa10.87□□□□□ -0.67
RAB11FIP3-207ENST00000461009 Q6P435 159 aa10.87□□□□□ -0.67
RAB11FIP3-207ENST00000461009 Q6YL49 198 aa10.87□□□□□ -0.67
RAB11FIP3-207ENST00000461009 C17orf107Q6ZR85 190 aa10.87□□□□□ -0.67
RAB11FIP3-207ENST00000461009 LINC00596Q86U02 117 aa10.87□□□□□ -0.67
RAB11FIP3-207ENST00000461009 LRRTM1Q86UE6 522 aa10.87□□□□□ -0.67
RAB11FIP3-207ENST00000461009 TMEM86BQ8N661 226 aa10.87□□□□□ -0.67
RAB11FIP3-207ENST00000461009 LHX4Q969G2 390 aa10.87□□□□□ -0.67
RAB11FIP3-207ENST00000461009 TBX15Q96SF7 602 aa10.87□□□□□ -0.67
RAB11FIP3-207ENST00000461009 METTL8Q9H825 291 aaKnown RBP10.87□□□□□ -0.67
RAB11FIP3-207ENST00000461009 UNKLQ9H9P5 680 aaKnown RBP10.87□□□□□ -0.67
RAB11FIP3-207ENST00000461009 VCX3AQ9NNX9 186 aa10.87□□□□□ -0.67
RAB11FIP3-207ENST00000461009 NDUFB11Q9NX14 153 aa10.87□□□□□ -0.67
RAB11FIP3-207ENST00000461009 FAM96BQ9Y3D0 163 aa10.87□□□□□ -0.67
RAB11FIP3-207ENST00000461009 DSCAML1Q8TD84 2053 aa10.86□□□□□ -0.67
RAB11FIP3-207ENST00000461009 A0A087WXM4 84 aa10.86□□□□□ -0.67
RAB11FIP3-207ENST00000461009 IGHV1-69DA0A0B4J2H0 117 aa10.86□□□□□ -0.67
RAB11FIP3-207ENST00000461009 A0A0G2JK05 382 aa10.86□□□□□ -0.67
RAB11FIP3-207ENST00000461009 CENPVL3A0A0U1RRI6 287 aa10.86□□□□□ -0.67
RAB11FIP3-207ENST00000461009 TRDV1A0A1B0GX56 115 aa10.86□□□□□ -0.67
RAB11FIP3-207ENST00000461009 H3BUI4 141 aa10.86□□□□□ -0.67
RAB11FIP3-207ENST00000461009 PSPNO60542 156 aa10.86□□□□□ -0.67
RAB11FIP3-207ENST00000461009 IGHV1-69P01742 117 aa10.86□□□□□ -0.67
RAB11FIP3-207ENST00000461009 CALRP27797 417 aaKnown RBP10.86□□□□□ -0.67
RAB11FIP3-207ENST00000461009 GP2P55259 537 aaKnown RBP10.86□□□□□ -0.67
RAB11FIP3-207ENST00000461009 EDDM3AQ14507 147 aa10.86□□□□□ -0.67
RAB11FIP3-207ENST00000461009 SSX1Q16384 188 aa10.86□□□□□ -0.67
RAB11FIP3-207ENST00000461009 KIAA2026Q5HYC2 2103 aa10.86□□□□□ -0.67
RAB11FIP3-207ENST00000461009 C1orf100Q5SVJ3 147 aa10.86□□□□□ -0.67
RAB11FIP3-207ENST00000461009 NCR3LG1Q68D85 454 aa10.86□□□□□ -0.67
RAB11FIP3-207ENST00000461009 VMO1Q7Z5L0 202 aa10.86□□□□□ -0.67
RAB11FIP3-207ENST00000461009 TSPAN14Q8NG11 270 aa10.86□□□□□ -0.67
RAB11FIP3-207ENST00000461009 OR4S1Q8NGB4 309 aa10.86□□□□□ -0.67
RAB11FIP3-207ENST00000461009 SSMEM1Q8WWF3 244 aa10.86□□□□□ -0.67
RAB11FIP3-207ENST00000461009 C1orf147Q96MC9 270 aaPredicted RBP10.86□□□□□ -0.67
RAB11FIP3-207ENST00000461009 NKX3-1Q99801 234 aaPredicted RBP10.86□□□□□ -0.67
RAB11FIP3-207ENST00000461009 BARHL1Q9BZE3 327 aa10.86□□□□□ -0.67
RAB11FIP3-207ENST00000461009 CHST6Q9GZX3 395 aa10.86□□□□□ -0.67
RAB11FIP3-207ENST00000461009 PRDM13Q9H4Q3 707 aa10.86□□□□□ -0.67
RAB11FIP3-207ENST00000461009 C19orf12Q9NSK7 152 aa10.86□□□□□ -0.67
RAB11FIP3-207ENST00000461009 POMT1Q9Y6A1 747 aa10.86□□□□□ -0.67
RAB11FIP3-207ENST00000461009 ANK2Q01484 3957 aa10.85□□□□□ -0.67
RAB11FIP3-207ENST00000461009 MDFIC2A0A1B0GVS7 189 aa10.85□□□□□ -0.67
RAB11FIP3-207ENST00000461009 SLC33A1O00400 549 aaPredicted RBP10.85□□□□□ -0.67
RAB11FIP3-207ENST00000461009 PDCD5O14737 125 aa10.85□□□□□ -0.67
RAB11FIP3-207ENST00000461009 CSN2P05814 226 aa10.85□□□□□ -0.67
RAB11FIP3-207ENST00000461009 ZNF728P0DKX0 622 aa10.85□□□□□ -0.67
RAB11FIP3-207ENST00000461009 OR3A1P47881 315 aa10.85□□□□□ -0.67
RAB11FIP3-207ENST00000461009 KCNJ3P48549 501 aa10.85□□□□□ -0.67
RAB11FIP3-207ENST00000461009 RBM11P57052 281 aaKnown RBP10.85□□□□□ -0.67
RAB11FIP3-207ENST00000461009 MPV17LQ2QL34 196 aa10.85□□□□□ -0.67
RAB11FIP3-207ENST00000461009 PIGYQ3MUY2 71 aa10.85□□□□□ -0.67
RAB11FIP3-207ENST00000461009 PAN3Q58A45 887 aaKnown RBP10.85□□□□□ -0.67
RAB11FIP3-207ENST00000461009 METAP1DQ6UB28 335 aaPredicted RBP10.85□□□□□ -0.67
RAB11FIP3-207ENST00000461009 LYPD6Q86Y78 171 aa10.85□□□□□ -0.67
RAB11FIP3-207ENST00000461009 Q8N7P7 452 aa10.85□□□□□ -0.67
RAB11FIP3-207ENST00000461009 OR4D6Q8NGJ1 314 aa10.85□□□□□ -0.67
RAB11FIP3-207ENST00000461009 OR4F5Q8NH21 305 aa10.85□□□□□ -0.67
RAB11FIP3-207ENST00000461009 CST11Q9H112 138 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms