RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 KIAA2026Q5HYC2 2103 aa18.28■□□□□ 0.52
PTPN4-207ENST00000460162 ODAMA1E959 279 aa18.27■□□□□ 0.52
PTPN4-207ENST00000460162 SLC33A1O00400 549 aaPredicted RBP18.27■□□□□ 0.52
PTPN4-207ENST00000460162 XPNPEP2O43895 674 aa18.27■□□□□ 0.52
PTPN4-207ENST00000460162 ZFPL1O95159 310 aa18.27■□□□□ 0.52
PTPN4-207ENST00000460162 IGLV1-47P01700 117 aa18.27■□□□□ 0.52
PTPN4-207ENST00000460162 CCDC159P0C7I6 412 aa18.27■□□□□ 0.52
PTPN4-207ENST00000460162 PTGFRP43088 359 aa18.27■□□□□ 0.52
PTPN4-207ENST00000460162 GLIPR1P48060 266 aa18.27■□□□□ 0.52
PTPN4-207ENST00000460162 ZP1P60852 638 aa18.27■□□□□ 0.52
PTPN4-207ENST00000460162 RAB40BQ12829 278 aa18.27■□□□□ 0.52
PTPN4-207ENST00000460162 SERPINA12Q8IW75 414 aa18.27■□□□□ 0.52
PTPN4-207ENST00000460162 C10orf67Q8IYJ2 551 aa18.27■□□□□ 0.52
PTPN4-207ENST00000460162 LYG1Q8N1E2 194 aa18.27■□□□□ 0.52
PTPN4-207ENST00000460162 OR4F17Q8NGA8 305 aa18.27■□□□□ 0.52
PTPN4-207ENST00000460162 OR5D14Q8NGL3 314 aa18.27■□□□□ 0.52
PTPN4-207ENST00000460162 HAVCR2Q8TDQ0 301 aa18.27■□□□□ 0.52
PTPN4-207ENST00000460162 CPNE2Q96FN4 548 aaPredicted RBP18.27■□□□□ 0.52
PTPN4-207ENST00000460162 OR4F4Q96R69 305 aa18.27■□□□□ 0.52
PTPN4-207ENST00000460162 C9orf16Q9BUW7 83 aa18.27■□□□□ 0.52
PTPN4-207ENST00000460162 ISG20L2Q9H9L3 353 aaKnown RBP18.27■□□□□ 0.52
PTPN4-207ENST00000460162 LIN7BQ9HAP6 207 aa18.27■□□□□ 0.52
PTPN4-207ENST00000460162 ERVK13-1Q9NX77 482 aa18.27■□□□□ 0.52
PTPN4-207ENST00000460162 BRS3P32247 399 aa18.26■□□□□ 0.51
PTPN4-207ENST00000460162 BLCAPP62952 87 aa18.26■□□□□ 0.51
PTPN4-207ENST00000460162 KISS1Q15726 138 aa18.26■□□□□ 0.51
PTPN4-207ENST00000460162 KRBOX4Q5JUW0 171 aa18.26■□□□□ 0.51
PTPN4-207ENST00000460162 Q6P435 159 aa18.26■□□□□ 0.51
PTPN4-207ENST00000460162 OR5AK2Q8NH90 309 aa18.26■□□□□ 0.51
PTPN4-207ENST00000460162 CREB3L1Q96BA8 519 aa18.26■□□□□ 0.51
PTPN4-207ENST00000460162 COQ2Q96H96 371 aa18.26■□□□□ 0.51
PTPN4-207ENST00000460162 CITED2Q99967 270 aaPredicted RBP18.26■□□□□ 0.51
PTPN4-207ENST00000460162 ZNF649Q9BS31 505 aa18.26■□□□□ 0.51
PTPN4-207ENST00000460162 DHDHQ9UQ10 334 aa18.26■□□□□ 0.51
PTPN4-207ENST00000460162 A0A087X0M5 115 aa18.25■□□□□ 0.51
PTPN4-207ENST00000460162 A0A1B0GX30 115 aa18.25■□□□□ 0.51
PTPN4-207ENST00000460162 ZNF729A6NN14 1252 aaPredicted RBP18.25■□□□□ 0.51
PTPN4-207ENST00000460162 LEUTXA8MZ59 168 aa18.25■□□□□ 0.51
PTPN4-207ENST00000460162 TMEM225BP0DP42 221 aa18.25■□□□□ 0.51
PTPN4-207ENST00000460162 CEACAM3P40198 252 aa18.25■□□□□ 0.51
PTPN4-207ENST00000460162 MTNR1BP49286 362 aa18.25■□□□□ 0.51
PTPN4-207ENST00000460162 SCN1BQ07699 218 aa18.25■□□□□ 0.51
PTPN4-207ENST00000460162 ATXN7L3Q14CW9 347 aaPredicted RBP18.25■□□□□ 0.51
PTPN4-207ENST00000460162 TMEM95Q3KNT9 176 aa18.25■□□□□ 0.51
PTPN4-207ENST00000460162 BAIAP2L2Q6UXY1 529 aa18.25■□□□□ 0.51
PTPN4-207ENST00000460162 Q6ZS46 218 aa18.25■□□□□ 0.51
PTPN4-207ENST00000460162 OR4D6Q8NGJ1 314 aa18.25■□□□□ 0.51
PTPN4-207ENST00000460162 RHOXF1Q8NHV9 184 aa18.25■□□□□ 0.51
PTPN4-207ENST00000460162 TSEN15Q8WW01 171 aaKnown RBP18.25■□□□□ 0.51
PTPN4-207ENST00000460162 OR5M11Q96RB7 305 aa18.25■□□□□ 0.51
PTPN4-207ENST00000460162 ZNF286AQ9HBT8 521 aa18.25■□□□□ 0.51
PTPN4-207ENST00000460162 OR6C3Q9NZP0 311 aa18.25■□□□□ 0.51
PTPN4-207ENST00000460162 FAM172BPA6NC97 362 aa18.24■□□□□ 0.51
PTPN4-207ENST00000460162 ADARB2-AS1A8MUL3 147 aa18.24■□□□□ 0.51
PTPN4-207ENST00000460162 GDNFP39905 211 aa18.24■□□□□ 0.51
PTPN4-207ENST00000460162 CDK5R1Q15078 307 aa18.24■□□□□ 0.51
PTPN4-207ENST00000460162 HLA-DRB5Q30154 266 aa18.24■□□□□ 0.51
PTPN4-207ENST00000460162 ZNF691Q5VV52 312 aa18.24■□□□□ 0.51
PTPN4-207ENST00000460162 CCDC121Q6ZUS5 278 aa18.24■□□□□ 0.51
PTPN4-207ENST00000460162 REC114Q7Z4M0 266 aa18.24■□□□□ 0.51
PTPN4-207ENST00000460162 PXT1Q8NFP0 134 aa18.24■□□□□ 0.51
PTPN4-207ENST00000460162 CAPSLQ8WWF8 208 aa18.24■□□□□ 0.51
PTPN4-207ENST00000460162 R3HDM4Q96D70 268 aa18.24■□□□□ 0.51
PTPN4-207ENST00000460162 PDCD1LG2Q9BQ51 273 aa18.24■□□□□ 0.51
PTPN4-207ENST00000460162 OCSTAMPQ9BR26 566 aa18.24■□□□□ 0.51
PTPN4-207ENST00000460162 MMP28Q9H239 520 aa18.24■□□□□ 0.51
PTPN4-207ENST00000460162 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.24■□□□□ 0.51
PTPN4-207ENST00000460162 DEGS1O15121 323 aa18.23■□□□□ 0.51
PTPN4-207ENST00000460162 GBX2P52951 348 aaPredicted RBP18.23■□□□□ 0.51
PTPN4-207ENST00000460162 ELP2Q6IA86 826 aa18.23■□□□□ 0.51
PTPN4-207ENST00000460162 PPIL3Q9H2H8 161 aaKnown RBP18.23■□□□□ 0.51
PTPN4-207ENST00000460162 AMBNQ9NP70 447 aa18.23■□□□□ 0.51
PTPN4-207ENST00000460162 MRPS18AQ9NVS2 196 aaKnown RBP18.23■□□□□ 0.51
PTPN4-207ENST00000460162 RPL36Q9Y3U8 105 aaKnown RBP18.23■□□□□ 0.51
PTPN4-207ENST00000460162 LOC100130705A0A1B0GUX0 176 aa18.22■□□□□ 0.51
PTPN4-207ENST00000460162 E9PI62 339 aa18.22■□□□□ 0.51
PTPN4-207ENST00000460162 H0YJX3 145 aa18.22■□□□□ 0.51
PTPN4-207ENST00000460162 TOR1AO14656 332 aa18.22■□□□□ 0.51
PTPN4-207ENST00000460162 RAB3AP20336 220 aa18.22■□□□□ 0.51
PTPN4-207ENST00000460162 TPTE2P1Q5T6R2 138 aa18.22■□□□□ 0.51
PTPN4-207ENST00000460162 LPCAT4Q643R3 524 aa18.22■□□□□ 0.51
PTPN4-207ENST00000460162 CCDC144NLQ6NUI1 221 aa18.22■□□□□ 0.51
PTPN4-207ENST00000460162 ZNF529Q6P280 563 aa18.22■□□□□ 0.51
PTPN4-207ENST00000460162 OR51T1Q8NGJ9 327 aa18.22■□□□□ 0.51
PTPN4-207ENST00000460162 OR52I1Q8NGK6 324 aa18.22■□□□□ 0.51
PTPN4-207ENST00000460162 SLC25A33Q9BSK2 321 aa18.22■□□□□ 0.51
PTPN4-207ENST00000460162 JAM3Q9BX67 310 aa18.22■□□□□ 0.51
PTPN4-207ENST00000460162 NOTCH3Q9UM47 2321 aa18.22■□□□□ 0.51
PTPN4-207ENST00000460162 KBTBD11-OT1A0A1B0GTJ5 212 aa18.21■□□□□ 0.51
PTPN4-207ENST00000460162 OOSP1A8MZH6 123 aa18.21■□□□□ 0.51
PTPN4-207ENST00000460162 BUB1B-PAK6H3BSN5 160 aa18.21■□□□□ 0.51
PTPN4-207ENST00000460162 OR2F2O95006 317 aa18.21■□□□□ 0.51
PTPN4-207ENST00000460162 PRRX1P54821 245 aa18.21■□□□□ 0.51
PTPN4-207ENST00000460162 IL13RA2Q14627 380 aa18.21■□□□□ 0.51
PTPN4-207ENST00000460162 C17orf58Q2M2W7 97 aa18.21■□□□□ 0.51
PTPN4-207ENST00000460162 KLHL22Q53GT1 634 aa18.21■□□□□ 0.51
PTPN4-207ENST00000460162 APH1BQ8WW43 257 aa18.21■□□□□ 0.51
PTPN4-207ENST00000460162 STMN2Q93045 179 aa18.21■□□□□ 0.51
PTPN4-207ENST00000460162 KIRREL1Q96J84 757 aa18.21■□□□□ 0.51
PTPN4-207ENST00000460162 RBM14Q96PK6 669 aaKnown RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms