RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 MRPL48Q96GC5 212 aaKnown RBP3.12□□□□□ -1.91
CCDC50-203ENST00000460064 CCDC42Q96M95 316 aa3.12□□□□□ -1.91
CCDC50-203ENST00000460064 GPR82Q96P67 336 aa3.12□□□□□ -1.91
CCDC50-203ENST00000460064 METTL9Q9H1A3 318 aa3.12□□□□□ -1.91
CCDC50-203ENST00000460064 DIABLOQ9NR28 239 aa3.12□□□□□ -1.91
CCDC50-203ENST00000460064 BATF3Q9NR55 127 aa3.12□□□□□ -1.91
CCDC50-203ENST00000460064 INIPQ9NRY2 104 aa3.12□□□□□ -1.91
CCDC50-203ENST00000460064 S4R3C0 116 aa3.12□□□□□ -1.91
CCDC50-203ENST00000460064 SIGLEC1Q9BZZ2 1709 aa3.12□□□□□ -1.91
CCDC50-203ENST00000460064 TRAV8-6A0A0B4J262 113 aa3.11□□□□□ -1.91
CCDC50-203ENST00000460064 GNG14A0A1W2PPG7 69 aa3.11□□□□□ -1.91
CCDC50-203ENST00000460064 A0A1W2PQ67 120 aa3.11□□□□□ -1.91
CCDC50-203ENST00000460064 ANKRD20A5PA0PJZ0 165 aa3.11□□□□□ -1.91
CCDC50-203ENST00000460064 BTNL10A8MVZ5 291 aa3.11□□□□□ -1.91
CCDC50-203ENST00000460064 SEC14L6B5MCN3 397 aa3.11□□□□□ -1.91
CCDC50-203ENST00000460064 J3QT63 122 aa3.11□□□□□ -1.91
CCDC50-203ENST00000460064 TGOLN2O43493 480 aa3.11□□□□□ -1.91
CCDC50-203ENST00000460064 ORM1P02763 201 aa3.11□□□□□ -1.91
CCDC50-203ENST00000460064 IDO1P14902 403 aa3.11□□□□□ -1.91
CCDC50-203ENST00000460064 M6PRP20645 277 aa3.11□□□□□ -1.91
CCDC50-203ENST00000460064 IL3RAP26951 378 aa3.11□□□□□ -1.91
CCDC50-203ENST00000460064 ARR3P36575 388 aa3.11□□□□□ -1.91
CCDC50-203ENST00000460064 CD79BP40259 229 aa3.11□□□□□ -1.91
CCDC50-203ENST00000460064 RANBP1P43487 201 aa3.11□□□□□ -1.91
CCDC50-203ENST00000460064 DNASE1L1P49184 302 aa3.11□□□□□ -1.91
CCDC50-203ENST00000460064 TAS2R43P59537 309 aa3.11□□□□□ -1.91
CCDC50-203ENST00000460064 AESQ08117 197 aa3.11□□□□□ -1.91
CCDC50-203ENST00000460064 SPCS2Q15005 226 aa3.11□□□□□ -1.91
CCDC50-203ENST00000460064 TMED2Q15363 201 aa3.11□□□□□ -1.91
CCDC50-203ENST00000460064 TAL2Q16559 108 aa3.11□□□□□ -1.91
CCDC50-203ENST00000460064 KRTAP13-3Q3SY46 172 aa3.11□□□□□ -1.91
CCDC50-203ENST00000460064 LUZP6Q538Z0 58 aa3.11□□□□□ -1.91
CCDC50-203ENST00000460064 KLHL12Q53G59 568 aa3.11□□□□□ -1.91
CCDC50-203ENST00000460064 SDHAF4Q5VUM1 108 aa3.11□□□□□ -1.91
CCDC50-203ENST00000460064 DNM1P34Q6PK57 102 aa3.11□□□□□ -1.91
CCDC50-203ENST00000460064 EPGNQ6UW88 154 aa3.11□□□□□ -1.91
CCDC50-203ENST00000460064 DRAM2Q6UX65 266 aa3.11□□□□□ -1.91
CCDC50-203ENST00000460064 SSX6Q7RTT6 188 aa3.11□□□□□ -1.91
CCDC50-203ENST00000460064 C10orf67Q8IYJ2 551 aa3.11□□□□□ -1.91
CCDC50-203ENST00000460064 ZNF101Q8IZC7 436 aa3.11□□□□□ -1.91
CCDC50-203ENST00000460064 LFNGQ8NES3 379 aa3.11□□□□□ -1.91
CCDC50-203ENST00000460064 OR6K2Q8NGY2 324 aa3.11□□□□□ -1.91
CCDC50-203ENST00000460064 SFXN5Q8TD22 340 aa3.11□□□□□ -1.91
CCDC50-203ENST00000460064 NEK7Q8TDX7 302 aa3.11□□□□□ -1.91
CCDC50-203ENST00000460064 PYDC1Q8WXC3 89 aa3.11□□□□□ -1.91
CCDC50-203ENST00000460064 C22orf15Q8WYQ4 148 aa3.11□□□□□ -1.91
CCDC50-203ENST00000460064 OR5P2Q8WZ92 322 aa3.11□□□□□ -1.91
CCDC50-203ENST00000460064 RMI2Q96E14 147 aa3.11□□□□□ -1.91
CCDC50-203ENST00000460064 ING2Q9H160 280 aa3.11□□□□□ -1.91
CCDC50-203ENST00000460064 ASCL3Q9NQ33 180 aa3.11□□□□□ -1.91
CCDC50-203ENST00000460064 C12orf4Q9NQ89 552 aa3.11□□□□□ -1.91
CCDC50-203ENST00000460064 TAS2R5Q9NYW4 299 aa3.11□□□□□ -1.91
CCDC50-203ENST00000460064 STOML2Q9UJZ1 356 aa3.11□□□□□ -1.91
CCDC50-203ENST00000460064 TFR2Q9UP52 801 aa3.11□□□□□ -1.91
CCDC50-203ENST00000460064 ANKRD12Q6UB98 2062 aa3.11□□□□□ -1.91
CCDC50-203ENST00000460064 ELP1O95163 1332 aa3.11□□□□□ -1.91
CCDC50-203ENST00000460064 ABCB11O95342 1321 aa3.11□□□□□ -1.91
CCDC50-203ENST00000460064 C2orf16Q68DN1 1984 aa3.11□□□□□ -1.91
CCDC50-203ENST00000460064 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.1□□□□□ -1.91
CCDC50-203ENST00000460064 J3QLI3 93 aa3.1□□□□□ -1.91
CCDC50-203ENST00000460064 PLPP3O14495 311 aa3.1□□□□□ -1.91
CCDC50-203ENST00000460064 SLC16A4O15374 487 aa3.1□□□□□ -1.91
CCDC50-203ENST00000460064 TNNC2P02585 160 aa3.1□□□□□ -1.91
CCDC50-203ENST00000460064 ZNF35P13682 527 aa3.1□□□□□ -1.91
CCDC50-203ENST00000460064 NQO1P15559 274 aaKnown RBP3.1□□□□□ -1.91
CCDC50-203ENST00000460064 TMEM33P57088 247 aa3.1□□□□□ -1.91
CCDC50-203ENST00000460064 OR10A3P58181 314 aa3.1□□□□□ -1.91
CCDC50-203ENST00000460064 RAB4BP61018 213 aa3.1□□□□□ -1.91
CCDC50-203ENST00000460064 PSME3P61289 254 aa3.1□□□□□ -1.91
CCDC50-203ENST00000460064 MLLT11Q13015 90 aaPredicted RBP3.1□□□□□ -1.91
CCDC50-203ENST00000460064 ZCWPW2Q504Y3 356 aa3.1□□□□□ -1.91
CCDC50-203ENST00000460064 AKIRIN2Q53H80 203 aa3.1□□□□□ -1.91
CCDC50-203ENST00000460064 NIPAL1Q6NVV3 410 aa3.1□□□□□ -1.91
CCDC50-203ENST00000460064 SSX7Q7RTT5 188 aa3.1□□□□□ -1.91
CCDC50-203ENST00000460064 RIBC1Q8N443 379 aaPredicted RBP3.1□□□□□ -1.91
CCDC50-203ENST00000460064 SPANXA2-OT1Q8N9U9 137 aa3.1□□□□□ -1.91
CCDC50-203ENST00000460064 OR5AK3PQ8NH89 298 aa3.1□□□□□ -1.91
CCDC50-203ENST00000460064 OR2V1Q8NHB1 315 aa3.1□□□□□ -1.91
CCDC50-203ENST00000460064 S100PBPQ96BU1 408 aa3.1□□□□□ -1.91
CCDC50-203ENST00000460064 SMARCD1Q96GM5 515 aa3.1□□□□□ -1.91
CCDC50-203ENST00000460064 CGREF1Q99674 301 aa3.1□□□□□ -1.91
CCDC50-203ENST00000460064 EBNA1BP2Q99848 306 aaKnown RBP3.1□□□□□ -1.91
CCDC50-203ENST00000460064 SLC22A4Q9H015 551 aa3.1□□□□□ -1.91
CCDC50-203ENST00000460064 ZSCAN16Q9H4T2 348 aaPredicted RBP3.1□□□□□ -1.91
CCDC50-203ENST00000460064 ASB7Q9H672 318 aa3.1□□□□□ -1.91
CCDC50-203ENST00000460064 IFT46Q9NQC8 304 aa3.1□□□□□ -1.91
CCDC50-203ENST00000460064 GID8Q9NWU2 228 aa3.1□□□□□ -1.91
CCDC50-203ENST00000460064 GUCA1BQ9UMX6 200 aa3.1□□□□□ -1.91
CCDC50-203ENST00000460064 ERGIC3Q9Y282 383 aa3.1□□□□□ -1.91
CCDC50-203ENST00000460064 ENPP4Q9Y6X5 453 aa3.1□□□□□ -1.91
CCDC50-203ENST00000460064 SCN1AP35498 2009 aa3.1□□□□□ -1.91
CCDC50-203ENST00000460064 NACADO15069 1562 aa3.09□□□□□ -1.91
CCDC50-203ENST00000460064 TRAV8-7A0A075B6U6 113 aa3.09□□□□□ -1.91
CCDC50-203ENST00000460064 FAM240AA0A1B0GVK7 77 aa3.09□□□□□ -1.91
CCDC50-203ENST00000460064 C9J4A7 227 aa3.09□□□□□ -1.91
CCDC50-203ENST00000460064 F5H768 121 aa3.09□□□□□ -1.91
CCDC50-203ENST00000460064 K7EM74 188 aa3.09□□□□□ -1.91
CCDC50-203ENST00000460064 M0QZ92 97 aa3.09□□□□□ -1.91
CCDC50-203ENST00000460064 M0R036 132 aa3.09□□□□□ -1.91
CCDC50-203ENST00000460064 LGALS9O00182 355 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms