RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 LMO1P25800 156 aa16.94■□□□□ 0.3
VARS-218ENST00000459667 PTGFRP43088 359 aa16.94■□□□□ 0.3
VARS-218ENST00000459667 MAP2K4P45985 399 aa16.94■□□□□ 0.3
VARS-218ENST00000459667 ERVFRD-1P60508 538 aa16.94■□□□□ 0.3
VARS-218ENST00000459667 TRAM1Q15629 374 aa16.94■□□□□ 0.3
VARS-218ENST00000459667 LIPKQ5VXJ0 399 aa16.94■□□□□ 0.3
VARS-218ENST00000459667 Q6P435 159 aa16.94■□□□□ 0.3
VARS-218ENST00000459667 ASCL4Q6XD76 172 aa16.94■□□□□ 0.3
VARS-218ENST00000459667 ZNF782Q6ZMW2 699 aaPredicted RBP16.94■□□□□ 0.3
VARS-218ENST00000459667 TCF23Q7RTU1 214 aa16.94■□□□□ 0.3
VARS-218ENST00000459667 ZNF367Q7RTV3 350 aa16.94■□□□□ 0.3
VARS-218ENST00000459667 LDLRAD3Q86YD5 345 aa16.94■□□□□ 0.3
VARS-218ENST00000459667 TMEM86BQ8N661 226 aa16.94■□□□□ 0.3
VARS-218ENST00000459667 CHST4Q8NCG5 386 aa16.94■□□□□ 0.3
VARS-218ENST00000459667 SSMEM1Q8WWF3 244 aa16.94■□□□□ 0.3
VARS-218ENST00000459667 ZNF714Q96N38 554 aa16.94■□□□□ 0.3
VARS-218ENST00000459667 NR1H4Q96RI1 486 aaPredicted RBP16.94■□□□□ 0.3
VARS-218ENST00000459667 S100A13Q99584 98 aa16.94■□□□□ 0.3
VARS-218ENST00000459667 PPA2Q9H2U2 334 aa16.94■□□□□ 0.3
VARS-218ENST00000459667 HEXA-AS1Q9H8Q6 139 aa16.94■□□□□ 0.3
VARS-218ENST00000459667 LINC00312Q9Y6C7 94 aa16.94■□□□□ 0.3
VARS-218ENST00000459667 DEGS1O15121 323 aa16.93■□□□□ 0.3
VARS-218ENST00000459667 CDRT1O95170 752 aa16.93■□□□□ 0.3
VARS-218ENST00000459667 HTR3BO95264 441 aa16.93■□□□□ 0.3
VARS-218ENST00000459667 PSMA1P25786 263 aaKnown RBP16.93■□□□□ 0.3
VARS-218ENST00000459667 ERP29P30040 261 aaKnown RBP16.93■□□□□ 0.3
VARS-218ENST00000459667 P2RX3P56373 397 aa16.93■□□□□ 0.3
VARS-218ENST00000459667 TPBGQ13641 420 aa16.93■□□□□ 0.3
VARS-218ENST00000459667 ACSM3Q53FZ2 586 aa16.93■□□□□ 0.3
VARS-218ENST00000459667 C16orf87Q6PH81 154 aa16.93■□□□□ 0.3
VARS-218ENST00000459667 MGLLQ99685 303 aa16.93■□□□□ 0.3
VARS-218ENST00000459667 METTL9Q9H1A3 318 aa16.93■□□□□ 0.3
VARS-218ENST00000459667 ZNRD1Q9P1U0 126 aa16.93■□□□□ 0.3
VARS-218ENST00000459667 ING4Q9UNL4 249 aa16.93■□□□□ 0.3
VARS-218ENST00000459667 POMT1Q9Y6A1 747 aa16.93■□□□□ 0.3
VARS-218ENST00000459667 A0A0G2JK05 382 aa16.92■□□□□ 0.3
VARS-218ENST00000459667 SLC33A1O00400 549 aaPredicted RBP16.92■□□□□ 0.3
VARS-218ENST00000459667 PIN1P1O15428 100 aa16.92■□□□□ 0.3
VARS-218ENST00000459667 PAHP00439 452 aa16.92■□□□□ 0.3
VARS-218ENST00000459667 RBP4P02753 201 aa16.92■□□□□ 0.3
VARS-218ENST00000459667 HKR1P10072 659 aa16.92■□□□□ 0.3
VARS-218ENST00000459667 COX7A1P24310 79 aa16.92■□□□□ 0.3
VARS-218ENST00000459667 COMPP49747 757 aaPredicted RBP16.92■□□□□ 0.3
VARS-218ENST00000459667 IL13RA2Q14627 380 aa16.92■□□□□ 0.3
VARS-218ENST00000459667 MIDNQ504T8 468 aa16.92■□□□□ 0.3
VARS-218ENST00000459667 OR51T1Q8NGJ9 327 aa16.92■□□□□ 0.3
VARS-218ENST00000459667 CHIAQ9BZP6 476 aa16.92■□□□□ 0.3
VARS-218ENST00000459667 TCF7L1Q9HCS4 588 aa16.92■□□□□ 0.3
VARS-218ENST00000459667 ACOT13Q9NPJ3 140 aa16.92■□□□□ 0.3
VARS-218ENST00000459667 PCDHB16Q9NRJ7 776 aa16.92■□□□□ 0.3
VARS-218ENST00000459667 IL36GQ9NZH8 169 aa16.92■□□□□ 0.3
VARS-218ENST00000459667 FUOMA2VDF0 154 aa16.91■□□□□ 0.3
VARS-218ENST00000459667 MEGF11A6BM72 1044 aa16.91■□□□□ 0.3
VARS-218ENST00000459667 IGHV4-59P01825 116 aa16.91■□□□□ 0.3
VARS-218ENST00000459667 CSTBP04080 98 aaKnown RBP16.91■□□□□ 0.3
VARS-218ENST00000459667 MAS1P04201 325 aa16.91■□□□□ 0.3
VARS-218ENST00000459667 CSN2P05814 226 aa16.91■□□□□ 0.3
VARS-218ENST00000459667 CPEP16870 476 aa16.91■□□□□ 0.3
VARS-218ENST00000459667 IER3P46695 156 aa16.91■□□□□ 0.3
VARS-218ENST00000459667 PIGYQ3MUY2 71 aa16.91■□□□□ 0.3
VARS-218ENST00000459667 TRAPPC6BQ86SZ2 158 aa16.91■□□□□ 0.3
VARS-218ENST00000459667 CDH26Q8IXH8 852 aa16.91■□□□□ 0.3
VARS-218ENST00000459667 JAGN1Q8N5M9 183 aa16.91■□□□□ 0.3
VARS-218ENST00000459667 NKAIN3Q8N8D7 197 aa16.91■□□□□ 0.3
VARS-218ENST00000459667 Q8NFD4 153 aa16.91■□□□□ 0.3
VARS-218ENST00000459667 IGHV1-8P0DP01 117 aa16.9■□□□□ 0.3
VARS-218ENST00000459667 SERPINA2P20848 420 aa16.9■□□□□ 0.3
VARS-218ENST00000459667 AESQ08117 197 aa16.9■□□□□ 0.3
VARS-218ENST00000459667 INSL4Q14641 139 aa16.9■□□□□ 0.3
VARS-218ENST00000459667 ATXN7L3Q14CW9 347 aaPredicted RBP16.9■□□□□ 0.3
VARS-218ENST00000459667 UNQ9370/PRO34162Q6UXP9 181 aa16.9■□□□□ 0.3
VARS-218ENST00000459667 CEACAM19Q7Z692 300 aa16.9■□□□□ 0.3
VARS-218ENST00000459667 OSR2Q8N2R0 312 aa16.9■□□□□ 0.3
VARS-218ENST00000459667 FCGR1BQ92637 280 aa16.9■□□□□ 0.3
VARS-218ENST00000459667 SLITRK2Q9H156 845 aa16.9■□□□□ 0.3
VARS-218ENST00000459667 DPAGT1Q9H3H5 408 aa16.9■□□□□ 0.3
VARS-218ENST00000459667 ING3Q9NXR8 418 aa16.9■□□□□ 0.3
VARS-218ENST00000459667 UBE2J1Q9Y385 318 aaPredicted RBP16.9■□□□□ 0.3
VARS-218ENST00000459667 LRRC42Q9Y546 428 aa16.9■□□□□ 0.3
VARS-218ENST00000459667 TRGV10A0A0A0MS01 117 aa16.89■□□□□ 0.29
VARS-218ENST00000459667 HSPB6O14558 160 aa16.89■□□□□ 0.29
VARS-218ENST00000459667 ZNF780AO75290 641 aaPredicted RBP16.89■□□□□ 0.29
VARS-218ENST00000459667 GLIPR1P48060 266 aa16.89■□□□□ 0.29
VARS-218ENST00000459667 EMX1Q04741 257 aaPredicted RBP16.89■□□□□ 0.29
VARS-218ENST00000459667 FOXL1Q12952 345 aa16.89■□□□□ 0.29
VARS-218ENST00000459667 PAN3Q58A45 887 aaKnown RBP16.89■□□□□ 0.29
VARS-218ENST00000459667 AWAT1Q58HT5 328 aa16.89■□□□□ 0.29
VARS-218ENST00000459667 KRBOX4Q5JUW0 171 aa16.89■□□□□ 0.29
VARS-218ENST00000459667 OR13D1Q8NGV5 346 aa16.89■□□□□ 0.29
VARS-218ENST00000459667 C17orf50Q8WW18 174 aa16.89■□□□□ 0.29
VARS-218ENST00000459667 PHYHIPQ92561 330 aa16.89■□□□□ 0.29
VARS-218ENST00000459667 TMEM203Q969S6 136 aa16.89■□□□□ 0.29
VARS-218ENST00000459667 MUL1Q969V5 352 aa16.89■□□□□ 0.29
VARS-218ENST00000459667 COQ2Q96H96 371 aa16.89■□□□□ 0.29
VARS-218ENST00000459667 ST3GAL6Q9Y274 331 aa16.89■□□□□ 0.29
VARS-218ENST00000459667 MRPS28Q9Y2Q9 187 aaKnown RBP16.89■□□□□ 0.29
VARS-218ENST00000459667 ODAMA1E959 279 aa16.88■□□□□ 0.29
VARS-218ENST00000459667 BTBD17A6NE02 478 aa16.88■□□□□ 0.29
VARS-218ENST00000459667 FAM181BA6NEQ2 426 aa16.88■□□□□ 0.29
VARS-218ENST00000459667 CLPXO76031 633 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms