RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-208ENST00000456173 WDFY1Q8IWB7 410 aa10.91□□□□□ -0.66
NEDD4L-208ENST00000456173 GTF3AQ92664 365 aaKnown RBP10.91□□□□□ -0.66
NEDD4L-208ENST00000456173 BARX1Q9HBU1 254 aaPredicted RBP10.91□□□□□ -0.66
NEDD4L-208ENST00000456173 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.91□□□□□ -0.66
NEDD4L-208ENST00000456173 MEX3AA1L020 520 aaKnown RBP10.9□□□□□ -0.66
NEDD4L-208ENST00000456173 DLEU1O43261 78 aa10.9□□□□□ -0.66
NEDD4L-208ENST00000456173 TIMM8AO60220 97 aaPredicted RBP10.9□□□□□ -0.66
NEDD4L-208ENST00000456173 HNRNPA1P09651 372 aaKnown RBP eCLIP10.9□□□□□ -0.66
NEDD4L-208ENST00000456173 PMCHL1Q16048 86 aa10.9□□□□□ -0.66
NEDD4L-208ENST00000456173 ZNF718Q3SXZ3 478 aa10.9□□□□□ -0.66
NEDD4L-208ENST00000456173 LDLRAD2Q5SZI1 272 aa10.9□□□□□ -0.66
NEDD4L-208ENST00000456173 SAMD13Q5VXD3 122 aa10.9□□□□□ -0.66
NEDD4L-208ENST00000456173 SLC25A34Q6PIV7 304 aa10.9□□□□□ -0.66
NEDD4L-208ENST00000456173 LIMS2Q7Z4I7 341 aa10.9□□□□□ -0.66
NEDD4L-208ENST00000456173 D2HGDHQ8N465 521 aa10.9□□□□□ -0.66
NEDD4L-208ENST00000456173 MRPL18Q9H0U6 180 aaKnown RBP10.9□□□□□ -0.66
NEDD4L-208ENST00000456173 FGF22Q9HCT0 170 aa10.9□□□□□ -0.66
NEDD4L-208ENST00000456173 RSPO2Q6UXX9 243 aaPredicted RBP10.9□□□□□ -0.66
NEDD4L-208ENST00000456173 REG4Q9BYZ8 158 aa10.9□□□□□ -0.66
NEDD4L-208ENST00000456173 DNAJC13O75165 2243 aa10.9□□□□□ -0.66
NEDD4L-208ENST00000456173 COLCA2A8K830 154 aa10.9□□□□□ -0.66
NEDD4L-208ENST00000456173 PITX3O75364 302 aa10.9□□□□□ -0.66
NEDD4L-208ENST00000456173 NDUFB4O95168 129 aa10.9□□□□□ -0.66
NEDD4L-208ENST00000456173 CD8AP01732 235 aa10.9□□□□□ -0.66
NEDD4L-208ENST00000456173 BPIFB3P59826 476 aa10.9□□□□□ -0.66
NEDD4L-208ENST00000456173 RHOBP62745 196 aa10.9□□□□□ -0.66
NEDD4L-208ENST00000456173 LSRQ86X29 649 aaPredicted RBP10.9□□□□□ -0.66
NEDD4L-208ENST00000456173 TMEM140Q9NV12 185 aa10.9□□□□□ -0.66
NEDD4L-208ENST00000456173 FLRT3Q9NZU0 649 aa10.9□□□□□ -0.66
NEDD4L-208ENST00000456173 DSPPQ9NZW4 1301 aa10.9□□□□□ -0.66
NEDD4L-208ENST00000456173 PDE6DO43924 150 aa10.9□□□□□ -0.66
NEDD4L-208ENST00000456173 HMGA1P17096 107 aaKnown RBP10.9□□□□□ -0.66
NEDD4L-208ENST00000456173 BTCP35070 178 aa10.9□□□□□ -0.66
NEDD4L-208ENST00000456173 MPLP40238 635 aa10.9□□□□□ -0.66
NEDD4L-208ENST00000456173 MEF2BQ02080 365 aaPredicted RBP10.9□□□□□ -0.66
NEDD4L-208ENST00000456173 CADM4Q8NFZ8 388 aa10.9□□□□□ -0.66
NEDD4L-208ENST00000456173 ZPLD1Q8TCW7 415 aa10.9□□□□□ -0.66
NEDD4L-208ENST00000456173 NUDT11Q96G61 164 aa10.9□□□□□ -0.66
NEDD4L-208ENST00000456173 SLC45A2Q9UMX9 530 aa10.9□□□□□ -0.66
NEDD4L-208ENST00000456173 CACNA1DQ01668 2161 aa10.9□□□□□ -0.67
NEDD4L-208ENST00000456173 SRSF10O75494 262 aaKnown RBP10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 WISP3O95389 354 aaPredicted RBP10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 SLC25A5P05141 298 aaKnown RBP10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 FAM157CP0CG43 387 aa10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 CSN1S1P47710 185 aa10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 PYY3Q5JQD4 70 aa10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 SLC36A1Q7Z2H8 476 aa10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 GAPTQ8N292 157 aa10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 MUC15Q8N387 334 aa10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 OR2M7Q8NG81 312 aa10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 PATE1Q8WXA2 126 aa10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 GAL3ST2Q9H3Q3 398 aa10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 IGHV3-15A0A0B4J1V0 119 aa10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 A0A1W2PPC1 479 aa10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 SH2D1BO14796 132 aa10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 PIN1P1O15428 100 aa10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 NDUFA2O43678 99 aa10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 GNG7O60262 68 aa10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 HIST1H2BKO60814 126 aa10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 HIST1H2BJP06899 126 aa10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 HIST1H2BOP23527 126 aa10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 HIST1H2BBP33778 126 aa10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 HIST1H2BDP58876 126 aa10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 HIST1H2BCP62807 126 aa10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 OR1C1Q15619 314 aa10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 HIST2H2BEQ16778 126 aa10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 HOGA1Q86XE5 327 aa10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 TMEM252Q8N6L7 170 aa10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 HIST1H2BHQ93079 126 aa10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 HIST1H2BNQ99877 126 aa10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 HIST1H2BMQ99879 126 aa10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 HDHD3Q9BSH5 251 aaPredicted RBP10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 ASCL3Q9NQ33 180 aa10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 KLHDC2Q9Y2U9 406 aa10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 TIMM10BQ9Y5J6 103 aa10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 SPTBP11277 2137 aa10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 CTXND1A0A1B0GTU2 59 aa10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 RNF222A6NCQ9 220 aa10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 CDS2O95674 445 aa10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 STAG3L2P0CL84 134 aa10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 PSMB2P49721 201 aa10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 FUT6P51993 359 aa10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 ZNF137PP52743 207 aa10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 FOXK1P85037 733 aa10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 C19orf48Q6RUI8 117 aa10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 ABHD3Q8WU67 409 aa10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 GALNT14Q96FL9 552 aa10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 NPTNQ9Y639 398 aa10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 XIRP1Q702N8 1843 aaKnown RBP10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 A0A1W2PN81 502 aa10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 VAMP5O95183 116 aa10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 OR13G1Q8NGZ3 307 aa10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 TAAR6Q96RI8 345 aa10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 MIEN1Q9BRT3 115 aa10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 GPR132Q9UNW8 380 aa10.89□□□□□ -0.67
NEDD4L-208ENST00000456173 TOGARAM1Q9Y4F4 1720 aa10.88□□□□□ -0.67
NEDD4L-208ENST00000456173 DEFA4P12838 97 aa10.88□□□□□ -0.67
NEDD4L-208ENST00000456173 BCL3P20749 454 aa10.88□□□□□ -0.67
NEDD4L-208ENST00000456173 RPS4Y1P22090 263 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms