RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 DUX4L4P0CJ87 422 aa13.82□□□□□ -0.2
CCDC90B-202ENST00000455220 DUX4L5P0CJ88 424 aa13.82□□□□□ -0.2
CCDC90B-202ENST00000455220 DUX4L6P0CJ89 424 aa13.82□□□□□ -0.2
CCDC90B-202ENST00000455220 DUX4L7P0CJ90 424 aa13.82□□□□□ -0.2
CCDC90B-202ENST00000455220 HIST1H1DP16402 221 aaKnown RBP13.82□□□□□ -0.2
CCDC90B-202ENST00000455220 NR4A2P43354 598 aa13.82□□□□□ -0.2
CCDC90B-202ENST00000455220 TAS2R20P59543 309 aa13.82□□□□□ -0.2
CCDC90B-202ENST00000455220 IL13RA1P78552 427 aa13.82□□□□□ -0.2
CCDC90B-202ENST00000455220 ARL6IP1Q15041 203 aa13.82□□□□□ -0.2
CCDC90B-202ENST00000455220 ZNF260Q3ZCT1 412 aa13.82□□□□□ -0.2
CCDC90B-202ENST00000455220 NKAPLQ5M9Q1 402 aa13.82□□□□□ -0.2
CCDC90B-202ENST00000455220 SHEQ5VZ18 495 aa13.82□□□□□ -0.2
CCDC90B-202ENST00000455220 DUX4L9Q6RFH8 374 aaPredicted RBP13.82□□□□□ -0.2
CCDC90B-202ENST00000455220 LYPD2Q6UXB3 125 aa13.82□□□□□ -0.2
CCDC90B-202ENST00000455220 SLC36A1Q7Z2H8 476 aa13.82□□□□□ -0.2
CCDC90B-202ENST00000455220 C6orf201Q7Z4U5 140 aa13.82□□□□□ -0.2
CCDC90B-202ENST00000455220 KRTAP1-3Q8IUG1 177 aa13.82□□□□□ -0.2
CCDC90B-202ENST00000455220 FAM216BQ8N7L0 139 aa13.82□□□□□ -0.2
CCDC90B-202ENST00000455220 ST8SIA4Q92187 359 aa13.82□□□□□ -0.2
CCDC90B-202ENST00000455220 MED30Q96HR3 178 aa13.82□□□□□ -0.2
CCDC90B-202ENST00000455220 CYYR1Q96J86 154 aa13.82□□□□□ -0.2
CCDC90B-202ENST00000455220 SNX22Q96L94 193 aa13.82□□□□□ -0.2
CCDC90B-202ENST00000455220 SHARPINQ9H0F6 387 aa13.82□□□□□ -0.2
CCDC90B-202ENST00000455220 FAM234AQ9H0X4 552 aa13.82□□□□□ -0.2
CCDC90B-202ENST00000455220 PLEKHJ1Q9NW61 149 aa13.82□□□□□ -0.2
CCDC90B-202ENST00000455220 CTSZQ9UBR2 303 aa13.82□□□□□ -0.2
CCDC90B-202ENST00000455220 DUX4Q9UBX2 424 aa13.82□□□□□ -0.2
CCDC90B-202ENST00000455220 KCNK7Q9Y2U2 307 aa13.82□□□□□ -0.2
CCDC90B-202ENST00000455220 NOTCH2Q04721 2471 aa13.81□□□□□ -0.2
CCDC90B-202ENST00000455220 AKAP9Q99996 3911 aa13.81□□□□□ -0.2
CCDC90B-202ENST00000455220 TRAV18A0A075B6X5 111 aa13.81□□□□□ -0.2
CCDC90B-202ENST00000455220 F5H0A9 414 aaPredicted RBP13.81□□□□□ -0.2
CCDC90B-202ENST00000455220 K7N7A8 449 aa13.81□□□□□ -0.2
CCDC90B-202ENST00000455220 TMPRSS2O15393 492 aa13.81□□□□□ -0.2
CCDC90B-202ENST00000455220 ADAM20O43506 726 aa13.81□□□□□ -0.2
CCDC90B-202ENST00000455220 CSN2P05814 226 aa13.81□□□□□ -0.2
CCDC90B-202ENST00000455220 OR3A1P47881 315 aa13.81□□□□□ -0.2
CCDC90B-202ENST00000455220 KCNJ3P48549 501 aa13.81□□□□□ -0.2
CCDC90B-202ENST00000455220 PAN3Q58A45 887 aaKnown RBP13.81□□□□□ -0.2
CCDC90B-202ENST00000455220 Q5PR19 223 aa13.81□□□□□ -0.2
CCDC90B-202ENST00000455220 BAIAP2L2Q6UXY1 529 aa13.81□□□□□ -0.2
CCDC90B-202ENST00000455220 IZUMO1Q8IYV9 350 aa13.81□□□□□ -0.2
CCDC90B-202ENST00000455220 DTX3Q8N9I9 347 aa13.81□□□□□ -0.2
CCDC90B-202ENST00000455220 ASCC1Q8N9N2 400 aaKnown RBP13.81□□□□□ -0.2
CCDC90B-202ENST00000455220 ZNRF1Q8ND25 227 aa13.81□□□□□ -0.2
CCDC90B-202ENST00000455220 FOXC2Q99958 501 aa13.81□□□□□ -0.2
CCDC90B-202ENST00000455220 SULT4A1Q9BR01 284 aa13.81□□□□□ -0.2
CCDC90B-202ENST00000455220 RABL2AQ9UBK7 228 aaPredicted RBP13.81□□□□□ -0.2
CCDC90B-202ENST00000455220 MIOXQ9UGB7 285 aa13.81□□□□□ -0.2
CCDC90B-202ENST00000455220 RABL2BQ9UNT1 228 aa13.81□□□□□ -0.2
CCDC90B-202ENST00000455220 V9GYH0 126 aa13.81□□□□□ -0.2
CCDC90B-202ENST00000455220 PRRC2AP48634 2157 aaKnown RBP13.81□□□□□ -0.2
CCDC90B-202ENST00000455220 SERPINE3A8MV23 424 aa13.8□□□□□ -0.2
CCDC90B-202ENST00000455220 FCN3O75636 299 aa13.8□□□□□ -0.2
CCDC90B-202ENST00000455220 HLA-DQB1P01920 261 aa13.8□□□□□ -0.2
CCDC90B-202ENST00000455220 TK1P04183 234 aa13.8□□□□□ -0.2
CCDC90B-202ENST00000455220 MELTFP08582 738 aa13.8□□□□□ -0.2
CCDC90B-202ENST00000455220 GSTP1P09211 210 aaKnown RBP13.8□□□□□ -0.2
CCDC90B-202ENST00000455220 SELLP14151 372 aa13.8□□□□□ -0.2
CCDC90B-202ENST00000455220 GNB3P16520 340 aa13.8□□□□□ -0.2
CCDC90B-202ENST00000455220 PAX5Q02548 391 aa13.8□□□□□ -0.2
CCDC90B-202ENST00000455220 RBM39Q14498 530 aaKnown RBP13.8□□□□□ -0.2
CCDC90B-202ENST00000455220 CDNFQ49AH0 187 aa13.8□□□□□ -0.2
CCDC90B-202ENST00000455220 BRICD5Q6PL45 260 aa13.8□□□□□ -0.2
CCDC90B-202ENST00000455220 OR8H2Q8N162 312 aa13.8□□□□□ -0.2
CCDC90B-202ENST00000455220 OR4S1Q8NGB4 309 aa13.8□□□□□ -0.2
CCDC90B-202ENST00000455220 PPP1R35Q8TAP8 253 aa13.8□□□□□ -0.2
CCDC90B-202ENST00000455220 FAAP24Q9BTP7 215 aa13.8□□□□□ -0.2
CCDC90B-202ENST00000455220 PPA2Q9H2U2 334 aa13.8□□□□□ -0.2
CCDC90B-202ENST00000455220 AUNIPQ9H7T9 357 aa13.8□□□□□ -0.2
CCDC90B-202ENST00000455220 ZMAT3Q9HA38 289 aaKnown RBP13.8□□□□□ -0.2
CCDC90B-202ENST00000455220 PATZ1Q9HBE1 687 aaKnown RBP13.8□□□□□ -0.2
CCDC90B-202ENST00000455220 FABP12A6NFH5 140 aa13.79□□□□□ -0.2
CCDC90B-202ENST00000455220 MCRIP1C9JLW8 97 aa13.79□□□□□ -0.2
CCDC90B-202ENST00000455220 CA11O75493 328 aa13.79□□□□□ -0.2
CCDC90B-202ENST00000455220 WNT2P09544 360 aa13.79□□□□□ -0.2
CCDC90B-202ENST00000455220 RPS2P15880 293 aaKnown RBP13.79□□□□□ -0.2
CCDC90B-202ENST00000455220 SLC25A16P16260 332 aa13.79□□□□□ -0.2
CCDC90B-202ENST00000455220 SPANXN2Q5MJ10 180 aa13.79□□□□□ -0.2
CCDC90B-202ENST00000455220 OLFML2AQ68BL7 652 aa13.79□□□□□ -0.2
CCDC90B-202ENST00000455220 ZNF841Q6ZN19 808 aa13.79□□□□□ -0.2
CCDC90B-202ENST00000455220 BPIFB2Q8N4F0 458 aa13.79□□□□□ -0.2
CCDC90B-202ENST00000455220 CHST6Q9GZX3 395 aa13.79□□□□□ -0.2
CCDC90B-202ENST00000455220 AKIP1Q9NQ31 210 aa13.79□□□□□ -0.2
CCDC90B-202ENST00000455220 A0A0G2JMP0 313 aa13.79□□□□□ -0.2
CCDC90B-202ENST00000455220 A0A0X1KG70 313 aa13.79□□□□□ -0.2
CCDC90B-202ENST00000455220 TMEM235A6NFC5 223 aa13.79□□□□□ -0.2
CCDC90B-202ENST00000455220 HSPB6O14558 160 aa13.79□□□□□ -0.2
CCDC90B-202ENST00000455220 MGST3O14880 152 aa13.79□□□□□ -0.2
CCDC90B-202ENST00000455220 PTBP1P26599 531 aaKnown RBP eCLIP13.79□□□□□ -0.2
CCDC90B-202ENST00000455220 LSAMPQ13449 338 aa13.79□□□□□ -0.2
CCDC90B-202ENST00000455220 GRK1Q15835 563 aa13.79□□□□□ -0.2
CCDC90B-202ENST00000455220 PNLIPRP3Q17RR3 467 aa13.79□□□□□ -0.2
CCDC90B-202ENST00000455220 HACD4Q5VWC8 232 aa13.79□□□□□ -0.2
CCDC90B-202ENST00000455220 PYHIN1Q6K0P9 492 aa13.79□□□□□ -0.2
CCDC90B-202ENST00000455220 GAPTQ8N292 157 aa13.79□□□□□ -0.2
CCDC90B-202ENST00000455220 MFSD4AQ8N468 514 aa13.79□□□□□ -0.2
CCDC90B-202ENST00000455220 TMEM185AQ8NFB2 350 aa13.79□□□□□ -0.2
CCDC90B-202ENST00000455220 OR4M2Q8NGB6 313 aa13.79□□□□□ -0.2
CCDC90B-202ENST00000455220 OR5D13Q8NGL4 314 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms