RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 RSU1Q15404 277 aa11.59□□□□□ -0.55
HDAC4-205ENST00000454542 DEFB112Q30KQ8 113 aa11.59□□□□□ -0.55
HDAC4-205ENST00000454542 PIGYQ3MUY2 71 aa11.59□□□□□ -0.55
HDAC4-205ENST00000454542 GDPD3Q7L5L3 318 aa11.59□□□□□ -0.55
HDAC4-205ENST00000454542 LINC00596Q86U02 117 aa11.59□□□□□ -0.55
HDAC4-205ENST00000454542 OR10K1Q8NGX5 313 aa11.59□□□□□ -0.55
HDAC4-205ENST00000454542 COQ2Q96H96 371 aa11.59□□□□□ -0.55
HDAC4-205ENST00000454542 METTL9Q9H1A3 318 aa11.59□□□□□ -0.55
HDAC4-205ENST00000454542 A0A0G2JK05 382 aa11.58□□□□□ -0.56
HDAC4-205ENST00000454542 A0A1W2PP11 408 aa11.58□□□□□ -0.56
HDAC4-205ENST00000454542 MEGF11A6BM72 1044 aa11.58□□□□□ -0.56
HDAC4-205ENST00000454542 RNF212BA8MTL3 300 aa11.58□□□□□ -0.56
HDAC4-205ENST00000454542 RRP9O43818 475 aaKnown RBP11.58□□□□□ -0.56
HDAC4-205ENST00000454542 RGS9O75916 674 aaPredicted RBP11.58□□□□□ -0.56
HDAC4-205ENST00000454542 MAS1P04201 325 aa11.58□□□□□ -0.56
HDAC4-205ENST00000454542 HSMCR30P0CW71 290 aa11.58□□□□□ -0.56
HDAC4-205ENST00000454542 ZNF44P15621 663 aa11.58□□□□□ -0.56
HDAC4-205ENST00000454542 UBE2E1P51965 193 aa11.58□□□□□ -0.56
HDAC4-205ENST00000454542 EDDM3BP56851 147 aa11.58□□□□□ -0.56
HDAC4-205ENST00000454542 EDDM3AQ14507 147 aa11.58□□□□□ -0.56
HDAC4-205ENST00000454542 KCTD21Q4G0X4 260 aa11.58□□□□□ -0.56
HDAC4-205ENST00000454542 HSD17B12Q53GQ0 312 aa11.58□□□□□ -0.56
HDAC4-205ENST00000454542 CD200R1LQ6Q8B3 271 aa11.58□□□□□ -0.56
HDAC4-205ENST00000454542 LDLRAD3Q86YD5 345 aa11.58□□□□□ -0.56
HDAC4-205ENST00000454542 SPARTQ8N0X7 666 aa11.58□□□□□ -0.56
HDAC4-205ENST00000454542 OSR2Q8N2R0 312 aa11.58□□□□□ -0.56
HDAC4-205ENST00000454542 SVOPQ8N4V2 548 aa11.58□□□□□ -0.56
HDAC4-205ENST00000454542 JAGN1Q8N5M9 183 aa11.58□□□□□ -0.56
HDAC4-205ENST00000454542 OR4D6Q8NGJ1 314 aa11.58□□□□□ -0.56
HDAC4-205ENST00000454542 MUL1Q969V5 352 aa11.58□□□□□ -0.56
HDAC4-205ENST00000454542 C19orf24Q9BVV8 132 aa11.58□□□□□ -0.56
HDAC4-205ENST00000454542 PPA2Q9H2U2 334 aa11.58□□□□□ -0.56
HDAC4-205ENST00000454542 NDUFB11Q9NX14 153 aa11.58□□□□□ -0.56
HDAC4-205ENST00000454542 MRPS28Q9Y2Q9 187 aaKnown RBP11.58□□□□□ -0.56
HDAC4-205ENST00000454542 hADV38S2A0JD32 116 aa11.57□□□□□ -0.56
HDAC4-205ENST00000454542 HTR3BO95264 441 aa11.57□□□□□ -0.56
HDAC4-205ENST00000454542 ZNF728P0DKX0 622 aa11.57□□□□□ -0.56
HDAC4-205ENST00000454542 SERPINA2P20848 420 aa11.57□□□□□ -0.56
HDAC4-205ENST00000454542 KCNJ3P48549 501 aa11.57□□□□□ -0.56
HDAC4-205ENST00000454542 ERVFRD-1P60508 538 aa11.57□□□□□ -0.56
HDAC4-205ENST00000454542 FABP5Q01469 135 aa11.57□□□□□ -0.56
HDAC4-205ENST00000454542 PRB3Q04118 309 aaPredicted RBP11.57□□□□□ -0.56
HDAC4-205ENST00000454542 MPV17LQ2QL34 196 aa11.57□□□□□ -0.56
HDAC4-205ENST00000454542 C1orf100Q5SVJ3 147 aa11.57□□□□□ -0.56
HDAC4-205ENST00000454542 AWAT2Q6E213 333 aa11.57□□□□□ -0.56
HDAC4-205ENST00000454542 ZNF773Q6PK81 442 aa11.57□□□□□ -0.56
HDAC4-205ENST00000454542 CEACAM19Q7Z692 300 aa11.57□□□□□ -0.56
HDAC4-205ENST00000454542 TPRX1Q8N7U7 411 aa11.57□□□□□ -0.56
HDAC4-205ENST00000454542 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.57□□□□□ -0.56
HDAC4-205ENST00000454542 FAM216AQ8WUB2 273 aa11.57□□□□□ -0.56
HDAC4-205ENST00000454542 CORO2AQ92828 525 aa11.57□□□□□ -0.56
HDAC4-205ENST00000454542 TMEM203Q969S6 136 aa11.57□□□□□ -0.56
HDAC4-205ENST00000454542 MRPS24Q96EL2 167 aaKnown RBP11.57□□□□□ -0.56
HDAC4-205ENST00000454542 ZNF714Q96N38 554 aa11.57□□□□□ -0.56
HDAC4-205ENST00000454542 GFI1Q99684 422 aa11.57□□□□□ -0.56
HDAC4-205ENST00000454542 NCOR1P1Q9H4R4 102 aa11.57□□□□□ -0.56
HDAC4-205ENST00000454542 TCF7L1Q9HCS4 588 aa11.57□□□□□ -0.56
HDAC4-205ENST00000454542 ZNF581Q9P0T4 197 aa11.57□□□□□ -0.56
HDAC4-205ENST00000454542 RCC2Q9P258 522 aaKnown RBP11.57□□□□□ -0.56
HDAC4-205ENST00000454542 ST3GAL6Q9Y274 331 aa11.57□□□□□ -0.56
HDAC4-205ENST00000454542 UBE2J1Q9Y385 318 aaPredicted RBP11.57□□□□□ -0.56
HDAC4-205ENST00000454542 LRRC42Q9Y546 428 aa11.57□□□□□ -0.56
HDAC4-205ENST00000454542 A0A0U1RQK1 487 aa11.56□□□□□ -0.56
HDAC4-205ENST00000454542 ODAMA1E959 279 aa11.56□□□□□ -0.56
HDAC4-205ENST00000454542 TRIM77I1YAP6 450 aa11.56□□□□□ -0.56
HDAC4-205ENST00000454542 DEGS1O15121 323 aa11.56□□□□□ -0.56
HDAC4-205ENST00000454542 NPFFO15130 113 aa11.56□□□□□ -0.56
HDAC4-205ENST00000454542 CLPXO76031 633 aa11.56□□□□□ -0.56
HDAC4-205ENST00000454542 RNASE1P07998 156 aaKnown RBP11.56□□□□□ -0.56
HDAC4-205ENST00000454542 MELTFP08582 738 aa11.56□□□□□ -0.56
HDAC4-205ENST00000454542 SRMP19623 302 aa11.56□□□□□ -0.56
HDAC4-205ENST00000454542 GPR176Q14439 515 aa11.56□□□□□ -0.56
HDAC4-205ENST00000454542 SLC22A6Q4U2R8 563 aa11.56□□□□□ -0.56
HDAC4-205ENST00000454542 GLIPR1L1Q6UWM5 242 aa11.56□□□□□ -0.56
HDAC4-205ENST00000454542 RBMS3Q6XE24 437 aaKnown RBP11.56□□□□□ -0.56
HDAC4-205ENST00000454542 Q6YL49 198 aa11.56□□□□□ -0.56
HDAC4-205ENST00000454542 PDZD9Q8IXQ8 264 aa11.56□□□□□ -0.56
HDAC4-205ENST00000454542 TMEM86BQ8N661 226 aa11.56□□□□□ -0.56
HDAC4-205ENST00000454542 FCGR1BQ92637 280 aa11.56□□□□□ -0.56
HDAC4-205ENST00000454542 FOXRED1Q96CU9 486 aaPredicted RBP11.56□□□□□ -0.56
HDAC4-205ENST00000454542 AJUBAQ96IF1 538 aa11.56□□□□□ -0.56
HDAC4-205ENST00000454542 ZNRD1Q9P1U0 126 aa11.56□□□□□ -0.56
HDAC4-205ENST00000454542 GHRLQ9UBU3 117 aa11.56□□□□□ -0.56
HDAC4-205ENST00000454542 ING4Q9UNL4 249 aa11.56□□□□□ -0.56
HDAC4-205ENST00000454542 hCG_1809904A0A1W2PP81 198 aa11.55□□□□□ -0.56
HDAC4-205ENST00000454542 A0A1W2PPE2 198 aa11.55□□□□□ -0.56
HDAC4-205ENST00000454542 A0A1W2PR64 198 aa11.55□□□□□ -0.56
HDAC4-205ENST00000454542 A0A1W2PRV1 198 aa11.55□□□□□ -0.56
HDAC4-205ENST00000454542 FUOMA2VDF0 154 aa11.55□□□□□ -0.56
HDAC4-205ENST00000454542 FAM90A10PA6NDY2 464 aa11.55□□□□□ -0.56
HDAC4-205ENST00000454542 FAM90A18PA6NE21 464 aa11.55□□□□□ -0.56
HDAC4-205ENST00000454542 FAM90A16PA6NEW6 464 aa11.55□□□□□ -0.56
HDAC4-205ENST00000454542 FAM90A20PA6NIJ5 464 aa11.55□□□□□ -0.56
HDAC4-205ENST00000454542 FAM90A8PA6NJQ4 464 aa11.55□□□□□ -0.56
HDAC4-205ENST00000454542 FAM90A7PA6NKC0 464 aa11.55□□□□□ -0.56
HDAC4-205ENST00000454542 FAM90A22PA8MWA6 464 aa11.55□□□□□ -0.56
HDAC4-205ENST00000454542 FAM90A12PA8MX19 464 aa11.55□□□□□ -0.56
HDAC4-205ENST00000454542 FAM90A5PA8MXJ8 464 aa11.55□□□□□ -0.56
HDAC4-205ENST00000454542 FAM90A23PA8MXZ1 464 aa11.55□□□□□ -0.56
HDAC4-205ENST00000454542 ODF3BA8MYP8 253 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms