RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 SERPINF1P36955 418 aa13.63□□□□□ -0.23
SNX17-204ENST00000453453 ADORA2A-AS1P86434 159 aa13.63□□□□□ -0.23
SNX17-204ENST00000453453 TMEM128Q5BJH2 165 aa13.63□□□□□ -0.23
SNX17-204ENST00000453453 UNQ6126/PRO20091Q6UXV3 157 aa13.63□□□□□ -0.23
SNX17-204ENST00000453453 APOBEC3DQ96AK3 386 aaPredicted RBP13.63□□□□□ -0.23
SNX17-204ENST00000453453 RNF126Q9BV68 326 aa13.63□□□□□ -0.23
SNX17-204ENST00000453453 C1QTNF5Q9BXJ0 243 aa13.63□□□□□ -0.23
SNX17-204ENST00000453453 RHOFQ9HBH0 211 aa13.63□□□□□ -0.23
SNX17-204ENST00000453453 KPTNQ9Y664 436 aa13.63□□□□□ -0.23
SNX17-204ENST00000453453 FAM90A27PA6NNH2 459 aa13.62□□□□□ -0.23
SNX17-204ENST00000453453 COLCA2A8K830 154 aa13.62□□□□□ -0.23
SNX17-204ENST00000453453 ZNF705EA8MWA4 302 aaPredicted RBP13.62□□□□□ -0.23
SNX17-204ENST00000453453 H3BSH0 61 aa13.62□□□□□ -0.23
SNX17-204ENST00000453453 FBXO24O75426 580 aa13.62□□□□□ -0.23
SNX17-204ENST00000453453 IGKV3-15P01624 115 aa13.62□□□□□ -0.23
SNX17-204ENST00000453453 CD5P06127 495 aa13.62□□□□□ -0.23
SNX17-204ENST00000453453 ERCC1P07992 297 aaPredicted RBP13.62□□□□□ -0.23
SNX17-204ENST00000453453 CHRM2P08172 466 aa13.62□□□□□ -0.23
SNX17-204ENST00000453453 CCL2P13500 99 aa13.62□□□□□ -0.23
SNX17-204ENST00000453453 HGFACQ04756 655 aa13.62□□□□□ -0.23
SNX17-204ENST00000453453 MALLQ13021 153 aa13.62□□□□□ -0.23
SNX17-204ENST00000453453 IGFBP7Q16270 282 aa13.62□□□□□ -0.23
SNX17-204ENST00000453453 TMEM200AQ86VY9 491 aa13.62□□□□□ -0.23
SNX17-204ENST00000453453 CA5BP1Q8WTZ4 195 aa13.62□□□□□ -0.23
SNX17-204ENST00000453453 PARP11Q9NR21 331 aa13.62□□□□□ -0.23
SNX17-204ENST00000453453 J3QW42 95 aa13.61□□□□□ -0.23
SNX17-204ENST00000453453 EIF3GO75821 320 aaKnown RBP eCLIP13.61□□□□□ -0.23
SNX17-204ENST00000453453 SFT2D2O95562 160 aa13.61□□□□□ -0.23
SNX17-204ENST00000453453 GAPDHP04406 335 aaKnown RBP13.61□□□□□ -0.23
SNX17-204ENST00000453453 ZNF20P17024 532 aa13.61□□□□□ -0.23
SNX17-204ENST00000453453 CCL1P22362 96 aa13.61□□□□□ -0.23
SNX17-204ENST00000453453 QRFPP83859 136 aa13.61□□□□□ -0.23
SNX17-204ENST00000453453 SNAI3Q3KNW1 292 aa13.61□□□□□ -0.23
SNX17-204ENST00000453453 C3orf36Q3SXR2 165 aa13.61□□□□□ -0.23
SNX17-204ENST00000453453 FBXL19-AS1Q494R0 122 aa13.61□□□□□ -0.23
SNX17-204ENST00000453453 JAGN1Q8N5M9 183 aa13.61□□□□□ -0.23
SNX17-204ENST00000453453 LINC00469Q8N7U9 141 aa13.61□□□□□ -0.23
SNX17-204ENST00000453453 OR5L1Q8NGL2 311 aa13.61□□□□□ -0.23
SNX17-204ENST00000453453 REEP6Q96HR9 211 aa13.61□□□□□ -0.23
SNX17-204ENST00000453453 FAM71F1Q96KD3 344 aaPredicted RBP13.61□□□□□ -0.23
SNX17-204ENST00000453453 BBC3Q96PG8 261 aaPredicted RBP13.61□□□□□ -0.23
SNX17-204ENST00000453453 ZNF319Q9P2F9 582 aa13.61□□□□□ -0.23
SNX17-204ENST00000453453 CGGBP1Q9UFW8 167 aaPredicted RBP13.61□□□□□ -0.23
SNX17-204ENST00000453453 PCNX1Q96RV3 2341 aa13.61□□□□□ -0.23
SNX17-204ENST00000453453 EPG5Q9HCE0 2579 aa13.61□□□□□ -0.23
SNX17-204ENST00000453453 C5orf52A6NGY3 159 aa13.61□□□□□ -0.23
SNX17-204ENST00000453453 RNASEK-C17orf49H0YIS7 233 aa13.61□□□□□ -0.23
SNX17-204ENST00000453453 CELA3BP08861 270 aa13.61□□□□□ -0.23
SNX17-204ENST00000453453 ACAA1P09110 424 aaPredicted RBP13.61□□□□□ -0.23
SNX17-204ENST00000453453 VAMP1P23763 118 aa13.61□□□□□ -0.23
SNX17-204ENST00000453453 UQCRFS1P47985 274 aa13.61□□□□□ -0.23
SNX17-204ENST00000453453 SULT1A2P50226 295 aa13.61□□□□□ -0.23
SNX17-204ENST00000453453 HABP2Q14520 560 aaPredicted RBP13.61□□□□□ -0.23
SNX17-204ENST00000453453 MOGAT2Q3SYC2 334 aa13.61□□□□□ -0.23
SNX17-204ENST00000453453 ALKBH2Q6NS38 261 aa13.61□□□□□ -0.23
SNX17-204ENST00000453453 COLCA1Q6ZS62 124 aa13.61□□□□□ -0.23
SNX17-204ENST00000453453 ZNF561Q8N587 486 aa13.61□□□□□ -0.23
SNX17-204ENST00000453453 ZSCAN4Q8NAM6 433 aaPredicted RBP13.61□□□□□ -0.23
SNX17-204ENST00000453453 TMED6Q8WW62 240 aa13.61□□□□□ -0.23
SNX17-204ENST00000453453 RNASE6Q93091 150 aaKnown RBP13.61□□□□□ -0.23
SNX17-204ENST00000453453 MICU1Q9BPX6 476 aa13.61□□□□□ -0.23
SNX17-204ENST00000453453 CMSS1Q9BQ75 279 aaKnown RBP13.61□□□□□ -0.23
SNX17-204ENST00000453453 SELENOIQ9C0D9 397 aa13.61□□□□□ -0.23
SNX17-204ENST00000453453 OPA3Q9H6K4 179 aa13.61□□□□□ -0.23
SNX17-204ENST00000453453 SEBOXQ9HB31 216 aaPredicted RBP13.61□□□□□ -0.23
SNX17-204ENST00000453453 KCNJ16Q9NPI9 418 aa13.61□□□□□ -0.23
SNX17-204ENST00000453453 METTL1Q9UBP6 276 aaKnown RBP13.61□□□□□ -0.23
SNX17-204ENST00000453453 EDARQ9UNE0 448 aa13.61□□□□□ -0.23
SNX17-204ENST00000453453 DHRS3O75911 302 aa13.6□□□□□ -0.23
SNX17-204ENST00000453453 IGLV1-44P01699 117 aa13.6□□□□□ -0.23
SNX17-204ENST00000453453 MT-ND4LP03901 98 aa13.6□□□□□ -0.23
SNX17-204ENST00000453453 CSTBP04080 98 aaKnown RBP13.6□□□□□ -0.23
SNX17-204ENST00000453453 MUC1P15941 1255 aaPredicted RBP13.6□□□□□ -0.23
SNX17-204ENST00000453453 FPR2P25090 351 aa13.6□□□□□ -0.23
SNX17-204ENST00000453453 CCKARP32238 428 aa13.6□□□□□ -0.23
SNX17-204ENST00000453453 PTGFRP43088 359 aa13.6□□□□□ -0.23
SNX17-204ENST00000453453 KCNJ3P48549 501 aa13.6□□□□□ -0.23
SNX17-204ENST00000453453 ZNF83P51522 516 aa13.6□□□□□ -0.23
SNX17-204ENST00000453453 DVL1P1P54792 670 aaPredicted RBP13.6□□□□□ -0.23
SNX17-204ENST00000453453 BTNL8Q6UX41 500 aa13.6□□□□□ -0.23
SNX17-204ENST00000453453 KCTD9Q7L273 389 aa13.6□□□□□ -0.23
SNX17-204ENST00000453453 PEG10Q86TG7 708 aaKnown RBP13.6□□□□□ -0.23
SNX17-204ENST00000453453 ANGPTL5Q86XS5 388 aa13.6□□□□□ -0.23
SNX17-204ENST00000453453 TERB2Q8NHR7 220 aa13.6□□□□□ -0.23
SNX17-204ENST00000453453 SGK3Q96BR1 496 aa13.6□□□□□ -0.23
SNX17-204ENST00000453453 SLC5A7Q9GZV3 580 aa13.6□□□□□ -0.23
SNX17-204ENST00000453453 GPR132Q9UNW8 380 aa13.6□□□□□ -0.23
SNX17-204ENST00000453453 NBASA2RRP1 2371 aa13.59□□□□□ -0.23
SNX17-204ENST00000453453 M0R1B8 84 aa13.59□□□□□ -0.23
SNX17-204ENST00000453453 IGLV3-1P01715 115 aa13.59□□□□□ -0.23
SNX17-204ENST00000453453 PRB1P04280 392 aa13.59□□□□□ -0.23
SNX17-204ENST00000453453 FABP1P07148 127 aa13.59□□□□□ -0.23
SNX17-204ENST00000453453 CECR9P0C854 216 aa13.59□□□□□ -0.23
SNX17-204ENST00000453453 RCC1P18754 421 aaPredicted RBP13.59□□□□□ -0.23
SNX17-204ENST00000453453 S100PP25815 95 aa13.59□□□□□ -0.23
SNX17-204ENST00000453453 HRH1P35367 487 aa13.59□□□□□ -0.23
SNX17-204ENST00000453453 GNALP38405 381 aa13.59□□□□□ -0.23
SNX17-204ENST00000453453 F2RL1P55085 397 aa13.59□□□□□ -0.23
SNX17-204ENST00000453453 ZNF843Q8N446 348 aa13.59□□□□□ -0.23
SNX17-204ENST00000453453 ACBD4Q8NC06 268 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms