RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 DNASE1P24855 282 aa12.22□□□□□ -0.45
TNF-208ENST00000449264 MDH2P40926 338 aaKnown RBP12.22□□□□□ -0.45
TNF-208ENST00000449264 GNG2P59768 71 aa12.22□□□□□ -0.45
TNF-208ENST00000449264 GUCA2AQ02747 115 aa12.22□□□□□ -0.45
TNF-208ENST00000449264 ARFRP1Q13795 201 aa12.22□□□□□ -0.45
TNF-208ENST00000449264 ATXN7L3Q14CW9 347 aaPredicted RBP12.22□□□□□ -0.45
TNF-208ENST00000449264 FAM216BQ8N7L0 139 aa12.22□□□□□ -0.45
TNF-208ENST00000449264 ST8SIA4Q92187 359 aa12.22□□□□□ -0.45
TNF-208ENST00000449264 RAB1CQ92928 201 aa12.22□□□□□ -0.45
TNF-208ENST00000449264 TMEM246Q9BRR3 403 aa12.22□□□□□ -0.45
TNF-208ENST00000449264 SRRQ9GZT4 340 aa12.22□□□□□ -0.45
TNF-208ENST00000449264 NARFLQ9H6Q4 476 aa12.22□□□□□ -0.45
TNF-208ENST00000449264 BARX1Q9HBU1 254 aaPredicted RBP12.22□□□□□ -0.45
TNF-208ENST00000449264 TMEM165Q9HC07 324 aa12.22□□□□□ -0.45
TNF-208ENST00000449264 AK3Q9UIJ7 227 aa12.22□□□□□ -0.45
TNF-208ENST00000449264 HSF4Q9ULV5 492 aa12.22□□□□□ -0.45
TNF-208ENST00000449264 MAP1AP78559 2803 aaPredicted RBP12.22□□□□□ -0.45
TNF-208ENST00000449264 TMEM82A0PJX8 343 aa12.22□□□□□ -0.45
TNF-208ENST00000449264 MEIOCA2RUB1 952 aa12.22□□□□□ -0.45
TNF-208ENST00000449264 H3BUI4 141 aa12.22□□□□□ -0.45
TNF-208ENST00000449264 PSPNO60542 156 aa12.22□□□□□ -0.45
TNF-208ENST00000449264 GSTP1P09211 210 aaKnown RBP12.22□□□□□ -0.45
TNF-208ENST00000449264 AMY2BP19961 511 aa12.22□□□□□ -0.45
TNF-208ENST00000449264 PRSS3P35030 304 aa12.22□□□□□ -0.45
TNF-208ENST00000449264 GPR6P46095 362 aaPredicted RBP12.22□□□□□ -0.45
TNF-208ENST00000449264 DGCR2P98153 550 aa12.22□□□□□ -0.45
TNF-208ENST00000449264 KCNJ8Q15842 424 aa12.22□□□□□ -0.45
TNF-208ENST00000449264 Q8N402 240 aa12.22□□□□□ -0.45
TNF-208ENST00000449264 ZNRF1Q8ND25 227 aa12.22□□□□□ -0.45
TNF-208ENST00000449264 TMEM185AQ8NFB2 350 aa12.22□□□□□ -0.45
TNF-208ENST00000449264 GAFA1Q96PS6 74 aa12.22□□□□□ -0.45
TNF-208ENST00000449264 HDHD3Q9BSH5 251 aaPredicted RBP12.22□□□□□ -0.45
TNF-208ENST00000449264 ZNF665Q9H7R5 613 aa12.22□□□□□ -0.45
TNF-208ENST00000449264 MYOZ1Q9NP98 299 aaPredicted RBP12.22□□□□□ -0.45
TNF-208ENST00000449264 RABL2AQ9UBK7 228 aaPredicted RBP12.22□□□□□ -0.45
TNF-208ENST00000449264 EDARQ9UNE0 448 aa12.22□□□□□ -0.45
TNF-208ENST00000449264 RABL2BQ9UNT1 228 aa12.22□□□□□ -0.45
TNF-208ENST00000449264 CSMD1Q96PZ7 3565 aa12.21□□□□□ -0.45
TNF-208ENST00000449264 SERPINE3A8MV23 424 aa12.21□□□□□ -0.45
TNF-208ENST00000449264 ADAM20O43506 726 aa12.21□□□□□ -0.45
TNF-208ENST00000449264 PTBP1P26599 531 aaKnown RBP eCLIP12.21□□□□□ -0.45
TNF-208ENST00000449264 OR3A1P47881 315 aa12.21□□□□□ -0.45
TNF-208ENST00000449264 PDLIM4P50479 330 aa12.21□□□□□ -0.45
TNF-208ENST00000449264 TMEM33P57088 247 aa12.21□□□□□ -0.45
TNF-208ENST00000449264 IL13RA1P78552 427 aa12.21□□□□□ -0.45
TNF-208ENST00000449264 MRPS15P82914 257 aaKnown RBP12.21□□□□□ -0.45
TNF-208ENST00000449264 RBM39Q14498 530 aaKnown RBP12.21□□□□□ -0.45
TNF-208ENST00000449264 ARL6IP1Q15041 203 aa12.21□□□□□ -0.45
TNF-208ENST00000449264 GRK1Q15835 563 aa12.21□□□□□ -0.45
TNF-208ENST00000449264 HACD4Q5VWC8 232 aa12.21□□□□□ -0.45
TNF-208ENST00000449264 DCDC5Q6ZRR9 648 aa12.21□□□□□ -0.45
TNF-208ENST00000449264 MUC20Q8N307 709 aaPredicted RBP12.21□□□□□ -0.45
TNF-208ENST00000449264 C15orf40Q8WUR7 153 aa12.21□□□□□ -0.45
TNF-208ENST00000449264 GSX2Q9BZM3 304 aa12.21□□□□□ -0.45
TNF-208ENST00000449264 ETAA1Q9NY74 926 aa12.21□□□□□ -0.45
TNF-208ENST00000449264 MAB21L2Q9Y586 359 aa12.21□□□□□ -0.45
TNF-208ENST00000449264 ZNF737O75373 536 aa12.2□□□□□ -0.46
TNF-208ENST00000449264 FCER2P06734 321 aa12.2□□□□□ -0.46
TNF-208ENST00000449264 CD3GP09693 182 aa12.2□□□□□ -0.46
TNF-208ENST00000449264 LMO1P25800 156 aa12.2□□□□□ -0.46
TNF-208ENST00000449264 PPP5CP53041 499 aa12.2□□□□□ -0.46
TNF-208ENST00000449264 PNLIPRP3Q17RR3 467 aa12.2□□□□□ -0.46
TNF-208ENST00000449264 CLEC2AQ6UVW9 174 aa12.2□□□□□ -0.46
TNF-208ENST00000449264 LYPD2Q6UXB3 125 aa12.2□□□□□ -0.46
TNF-208ENST00000449264 ZNF788Q6ZQV5 615 aa12.2□□□□□ -0.46
TNF-208ENST00000449264 C17orf107Q6ZR85 190 aa12.2□□□□□ -0.46
TNF-208ENST00000449264 SLC36A1Q7Z2H8 476 aa12.2□□□□□ -0.46
TNF-208ENST00000449264 TRAPPC6BQ86SZ2 158 aa12.2□□□□□ -0.46
TNF-208ENST00000449264 OR8H2Q8N162 312 aa12.2□□□□□ -0.46
TNF-208ENST00000449264 ZNF561Q8N587 486 aa12.2□□□□□ -0.46
TNF-208ENST00000449264 OR4S1Q8NGB4 309 aa12.2□□□□□ -0.46
TNF-208ENST00000449264 OR52I2Q8NH67 350 aa12.2□□□□□ -0.46
TNF-208ENST00000449264 SMIM4Q8WVI0 70 aa12.2□□□□□ -0.46
TNF-208ENST00000449264 SDSLQ96GA7 329 aa12.2□□□□□ -0.46
TNF-208ENST00000449264 SDHCQ99643 169 aaPredicted RBP12.2□□□□□ -0.46
TNF-208ENST00000449264 CMSS1Q9BQ75 279 aaKnown RBP12.2□□□□□ -0.46
TNF-208ENST00000449264 CHMP1AQ9HD42 196 aaPredicted RBP12.2□□□□□ -0.46
TNF-208ENST00000449264 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.2□□□□□ -0.46
TNF-208ENST00000449264 VPS13CQ709C8 3753 aa12.2□□□□□ -0.46
TNF-208ENST00000449264 KIAA2026Q5HYC2 2103 aa12.2□□□□□ -0.46
TNF-208ENST00000449264 ASH1LQ9NR48 2969 aaKnown RBP12.2□□□□□ -0.46
TNF-208ENST00000449264 CEACAM18A8MTB9 384 aa12.19□□□□□ -0.46
TNF-208ENST00000449264 GABARAPH6UMI1 98 aa12.19□□□□□ -0.46
TNF-208ENST00000449264 SIGLEC5O15389 551 aa12.19□□□□□ -0.46
TNF-208ENST00000449264 PAX1P15863 534 aa12.19□□□□□ -0.46
TNF-208ENST00000449264 RPS2P15880 293 aaKnown RBP12.19□□□□□ -0.46
TNF-208ENST00000449264 EDDM3AQ14507 147 aa12.19□□□□□ -0.46
TNF-208ENST00000449264 DEFB113Q30KQ7 82 aa12.19□□□□□ -0.46
TNF-208ENST00000449264 GDPD1Q8N9F7 314 aa12.19□□□□□ -0.46
TNF-208ENST00000449264 PLPPR1Q8TBJ4 325 aa12.19□□□□□ -0.46
TNF-208ENST00000449264 FCAMRQ8WWV6 532 aa12.19□□□□□ -0.46
TNF-208ENST00000449264 FAM168AQ92567 244 aa12.19□□□□□ -0.46
TNF-208ENST00000449264 BPESC1Q9GZL8 116 aa12.19□□□□□ -0.46
TNF-208ENST00000449264 BEX4Q9NWD9 120 aaPredicted RBP12.19□□□□□ -0.46
TNF-208ENST00000449264 DOCK11Q5JSL3 2073 aa12.19□□□□□ -0.46
TNF-208ENST00000449264 CTDSPLO15194 276 aa12.19□□□□□ -0.46
TNF-208ENST00000449264 SSX5O60225 188 aa12.19□□□□□ -0.46
TNF-208ENST00000449264 TPPPO94811 219 aa12.19□□□□□ -0.46
TNF-208ENST00000449264 LPLP06858 475 aa12.19□□□□□ -0.46
TNF-208ENST00000449264 MELTFP08582 738 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms