RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 C17orf107Q6ZR85 190 aa16.11■□□□□ 0.17
RPS28-202ENST00000449223 ZNF561Q8N587 486 aa16.11■□□□□ 0.17
RPS28-202ENST00000449223 BOLLQ8N9W6 283 aaKnown RBP16.11■□□□□ 0.17
RPS28-202ENST00000449223 MARVELD3Q96A59 401 aa16.11■□□□□ 0.17
RPS28-202ENST00000449223 CYYR1Q96J86 154 aa16.11■□□□□ 0.17
RPS28-202ENST00000449223 OCSTAMPQ9BR26 566 aa16.11■□□□□ 0.17
RPS28-202ENST00000449223 MYOZ1Q9NP98 299 aaPredicted RBP16.11■□□□□ 0.17
RPS28-202ENST00000449223 KLK11Q9UBX7 282 aa16.11■□□□□ 0.17
RPS28-202ENST00000449223 ZNF107Q9UII5 783 aaPredicted RBP16.11■□□□□ 0.17
RPS28-202ENST00000449223 AK3Q9UIJ7 227 aa16.11■□□□□ 0.17
RPS28-202ENST00000449223 SPG11Q96JI7 2443 aa16.11■□□□□ 0.17
RPS28-202ENST00000449223 IGHV3OR15-7A0A075B7D8 119 aa16.1■□□□□ 0.17
RPS28-202ENST00000449223 NDUFA2O43678 99 aa16.1■□□□□ 0.17
RPS28-202ENST00000449223 LANCL1O43813 399 aa16.1■□□□□ 0.17
RPS28-202ENST00000449223 ORC5O43913 435 aa16.1■□□□□ 0.17
RPS28-202ENST00000449223 PSPNO60542 156 aa16.1■□□□□ 0.17
RPS28-202ENST00000449223 NAPSAO96009 420 aa16.1■□□□□ 0.17
RPS28-202ENST00000449223 CD3GP09693 182 aa16.1■□□□□ 0.17
RPS28-202ENST00000449223 DTYMKP23919 212 aa16.1■□□□□ 0.17
RPS28-202ENST00000449223 CEBPDP49716 269 aaPredicted RBP16.1■□□□□ 0.17
RPS28-202ENST00000449223 TMEM33P57088 247 aa16.1■□□□□ 0.17
RPS28-202ENST00000449223 ACTBP60709 375 aa16.1■□□□□ 0.17
RPS28-202ENST00000449223 ACTG1P63261 375 aa16.1■□□□□ 0.17
RPS28-202ENST00000449223 GUCA2AQ02747 115 aa16.1■□□□□ 0.17
RPS28-202ENST00000449223 COL10A1Q03692 680 aa16.1■□□□□ 0.17
RPS28-202ENST00000449223 KCNJ8Q15842 424 aa16.1■□□□□ 0.17
RPS28-202ENST00000449223 PAN3Q58A45 887 aaKnown RBP16.1■□□□□ 0.17
RPS28-202ENST00000449223 OR8H2Q8N162 312 aa16.1■□□□□ 0.17
RPS28-202ENST00000449223 NUDCD2Q8WVJ2 157 aa16.1■□□□□ 0.17
RPS28-202ENST00000449223 DEDD2Q8WXF8 326 aa16.1■□□□□ 0.17
RPS28-202ENST00000449223 SHARPINQ9H0F6 387 aa16.1■□□□□ 0.17
RPS28-202ENST00000449223 RIMS4Q9H426 269 aaPredicted RBP16.1■□□□□ 0.17
RPS28-202ENST00000449223 C12orf4Q9NQ89 552 aa16.1■□□□□ 0.17
RPS28-202ENST00000449223 KAAG1Q9UBP8 84 aa16.1■□□□□ 0.17
RPS28-202ENST00000449223 TRBV6-6A0A0A6YYG2 114 aa16.09■□□□□ 0.17
RPS28-202ENST00000449223 A0A1W2PQ09 198 aa16.09■□□□□ 0.17
RPS28-202ENST00000449223 LYNX1G3V0Z9 82 aa16.09■□□□□ 0.17
RPS28-202ENST00000449223 SIRPB1O00241 398 aa16.09■□□□□ 0.17
RPS28-202ENST00000449223 RBBP9O75884 186 aa16.09■□□□□ 0.17
RPS28-202ENST00000449223 IGHV2-70P01814 119 aa16.09■□□□□ 0.17
RPS28-202ENST00000449223 LYNX1P0DP58 116 aa16.09■□□□□ 0.17
RPS28-202ENST00000449223 GDNFP39905 211 aa16.09■□□□□ 0.17
RPS28-202ENST00000449223 SCN1BQ07699 218 aa16.09■□□□□ 0.17
RPS28-202ENST00000449223 ZMYND11Q15326 602 aa16.09■□□□□ 0.17
RPS28-202ENST00000449223 TRIQKQ629K1 86 aa16.09■□□□□ 0.17
RPS28-202ENST00000449223 STEAP3Q658P3 488 aa16.09■□□□□ 0.17
RPS28-202ENST00000449223 ZNF787Q6DD87 383 aa16.09■□□□□ 0.17
RPS28-202ENST00000449223 C16orf87Q6PH81 154 aa16.09■□□□□ 0.17
RPS28-202ENST00000449223 LYSMD2Q8IV50 215 aa16.09■□□□□ 0.17
RPS28-202ENST00000449223 C19orf18Q8NEA5 215 aa16.09■□□□□ 0.17
RPS28-202ENST00000449223 OR5T2Q8NGG2 359 aa16.09■□□□□ 0.17
RPS28-202ENST00000449223 SNX22Q96L94 193 aa16.09■□□□□ 0.17
RPS28-202ENST00000449223 CMSS1Q9BQ75 279 aaKnown RBP16.09■□□□□ 0.17
RPS28-202ENST00000449223 CHST6Q9GZX3 395 aa16.09■□□□□ 0.17
RPS28-202ENST00000449223 FAM234AQ9H0X4 552 aa16.09■□□□□ 0.17
RPS28-202ENST00000449223 TMEM165Q9HC07 324 aa16.09■□□□□ 0.17
RPS28-202ENST00000449223 TAS2R8Q9NYW2 309 aa16.09■□□□□ 0.17
RPS28-202ENST00000449223 MAB21L2Q9Y586 359 aa16.09■□□□□ 0.17
RPS28-202ENST00000449223 TMEM82A0PJX8 343 aa16.09■□□□□ 0.17
RPS28-202ENST00000449223 ISPDA4D126 451 aa16.09■□□□□ 0.17
RPS28-202ENST00000449223 SIGLEC5O15389 551 aa16.09■□□□□ 0.17
RPS28-202ENST00000449223 NDUFS7O75251 213 aa16.09■□□□□ 0.17
RPS28-202ENST00000449223 LY6HO94772 140 aa16.09■□□□□ 0.17
RPS28-202ENST00000449223 ZNF205O95201 554 aa16.09■□□□□ 0.17
RPS28-202ENST00000449223 NAT1P18440 290 aa16.09■□□□□ 0.17
RPS28-202ENST00000449223 OR3A1P47881 315 aa16.09■□□□□ 0.17
RPS28-202ENST00000449223 ARFRP1Q13795 201 aa16.09■□□□□ 0.17
RPS28-202ENST00000449223 SRSF7Q16629 238 aaKnown RBP eCLIP16.09■□□□□ 0.17
RPS28-202ENST00000449223 BRICD5Q6PL45 260 aa16.09■□□□□ 0.17
RPS28-202ENST00000449223 TRAPPC6BQ86SZ2 158 aa16.09■□□□□ 0.17
RPS28-202ENST00000449223 PEG10Q86TG7 708 aaKnown RBP16.09■□□□□ 0.17
RPS28-202ENST00000449223 GAFA1Q96PS6 74 aa16.09■□□□□ 0.17
RPS28-202ENST00000449223 ZNF665Q9H7R5 613 aa16.09■□□□□ 0.17
RPS28-202ENST00000449223 ABCB10Q9NRK6 738 aa16.09■□□□□ 0.17
RPS28-202ENST00000449223 METRNQ9UJH8 293 aa16.09■□□□□ 0.17
RPS28-202ENST00000449223 UBE2QL1A1L167 161 aa16.08■□□□□ 0.16
RPS28-202ENST00000449223 K7N7A8 449 aa16.08■□□□□ 0.16
RPS28-202ENST00000449223 IGHV4-39P01824 125 aa16.08■□□□□ 0.16
RPS28-202ENST00000449223 RCVRNP35243 200 aa16.08■□□□□ 0.16
RPS28-202ENST00000449223 ZNF497Q6ZNH5 498 aa16.08■□□□□ 0.16
RPS28-202ENST00000449223 Q6ZS49 121 aa16.08■□□□□ 0.16
RPS28-202ENST00000449223 MUC20Q8N307 709 aaPredicted RBP16.08■□□□□ 0.16
RPS28-202ENST00000449223 BPIFB2Q8N4F0 458 aa16.08■□□□□ 0.16
RPS28-202ENST00000449223 PPP1R35Q8TAP8 253 aa16.08■□□□□ 0.16
RPS28-202ENST00000449223 LIME1Q9H400 295 aa16.08■□□□□ 0.16
RPS28-202ENST00000449223 BARX1Q9HBU1 254 aaPredicted RBP16.08■□□□□ 0.16
RPS28-202ENST00000449223 ETAA1Q9NY74 926 aa16.08■□□□□ 0.16
RPS28-202ENST00000449223 EDARQ9UNE0 448 aa16.08■□□□□ 0.16
RPS28-202ENST00000449223 APCP25054 2843 aa16.07■□□□□ 0.16
RPS28-202ENST00000449223 ANKRD20A5PA0PJZ0 165 aa16.07■□□□□ 0.16
RPS28-202ENST00000449223 H7C1Q1 480 aa16.07■□□□□ 0.16
RPS28-202ENST00000449223 ECDO95905 644 aaPredicted RBP16.07■□□□□ 0.16
RPS28-202ENST00000449223 GYPAP02724 150 aa16.07■□□□□ 0.16
RPS28-202ENST00000449223 IL13RA1P78552 427 aa16.07■□□□□ 0.16
RPS28-202ENST00000449223 MRPS15P82914 257 aaKnown RBP16.07■□□□□ 0.16
RPS28-202ENST00000449223 KLF9Q13886 244 aaPredicted RBP16.07■□□□□ 0.16
RPS28-202ENST00000449223 DCDC5Q6ZRR9 648 aa16.07■□□□□ 0.16
RPS28-202ENST00000449223 DEFB108BQ8NET1 73 aa16.07■□□□□ 0.16
RPS28-202ENST00000449223 SETD6Q8TBK2 473 aa16.07■□□□□ 0.16
RPS28-202ENST00000449223 TIMD4Q96H15 378 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms