RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 ZFP41Q8N8Y5 198 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 CMTM2Q8TAZ6 248 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 F5H5P2 479 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 CHST1O43916 411 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 ALKBH1Q13686 389 aaKnown RBP4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 LRRC75BQ2VPJ9 315 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 ACP7Q6ZNF0 438 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 AKAP14Q86UN6 197 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 STHQ8IWL8 128 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 C20orf196Q8IYI0 205 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 OR10V1Q8NGI7 309 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 ZNF420Q8TAQ5 688 aaPredicted RBP4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 ZNF714Q96N38 554 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 NICN1Q9BSH3 213 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 BABAM2Q9NXR7 383 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 LTBP2Q14767 1821 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 RNASEK-C17orf49H0YIS7 233 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 NGFP01138 241 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 PRH1P02810 166 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 GAPDHP04406 335 aaKnown RBP4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 SPP1P10451 314 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 Q499Y3 187 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 PRAMEF5Q5TYX0 476 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 SNX29P2Q8IUI4 249 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 FUNDC1Q8IVP5 155 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 PNKDQ8N490 385 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 OR8G5Q8NG78 346 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 RFESDQ8TAC1 157 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 GSKIPQ9P0R6 139 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 R4GMQ9 66 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 SEC14L6B5MCN3 397 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 C4orf51C9J302 202 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 RAMP1O60894 148 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 CTLA4P16410 223 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 BTG1P62324 171 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 TAF9Q16594 264 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 KLF14Q8TD94 323 aaPredicted RBP4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 SLAMF9Q96A28 289 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 C14orf79Q96F83 325 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 ZNF385DQ9H6B1 395 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 HEYLQ9NQ87 328 aaPredicted RBP4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 SLC22A13Q9Y226 551 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 STARD10Q9Y365 291 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 IGHV2OR16-5A0A0B4J2B6 119 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 J3QT63 122 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 S100A4P26447 101 aaKnown RBP4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 ZNF133P52736 654 aaPredicted RBP4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 RRAS2P62070 204 aaPredicted RBP4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 LIPKQ5VXJ0 399 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 CCDC190Q86UF4 302 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 C12orf45Q8N5I9 185 aaPredicted RBP4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 RAX2Q96IS3 184 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 BTF3L4Q96K17 158 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 C7orf34Q96L11 122 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 TEAD3Q99594 435 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 ASCL2Q99929 193 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 SULT4A1Q9BR01 284 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 RBMX2Q9Y388 322 aaKnown RBP4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 OR6C68A6NDL8 312 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 J3QLI3 93 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 RBBP9O75884 186 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 SBK3P0C264 359 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 CTXN2P0C2S0 81 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 RAB3BP20337 219 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 RPL35P42766 123 aaKnown RBP4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 GSG1LQ6UXU4 331 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 SECTM1Q8WVN6 248 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 DUS3LQ96G46 650 aaKnown RBP4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 YTHDF2Q9Y5A9 579 aaKnown RBP4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 NPIPB8E9PQR5 432 aa4.84□□□□□ -1.63
CDC42BPA-209ENST00000448940 COX5BP10606 129 aa4.84□□□□□ -1.63
CDC42BPA-209ENST00000448940 CEACAM8P31997 349 aaPredicted RBP4.84□□□□□ -1.63
CDC42BPA-209ENST00000448940 WNT4P56705 351 aa4.84□□□□□ -1.63
CDC42BPA-209ENST00000448940 FGF12P61328 243 aa4.84□□□□□ -1.63
CDC42BPA-209ENST00000448940 OTPQ5XKR4 325 aa4.84□□□□□ -1.63
CDC42BPA-209ENST00000448940 GLIPR1L1Q6UWM5 242 aa4.84□□□□□ -1.63
CDC42BPA-209ENST00000448940 ZCCHC24Q8N2G6 241 aaKnown RBP4.84□□□□□ -1.63
CDC42BPA-209ENST00000448940 CHPT1Q8WUD6 406 aa4.84□□□□□ -1.63
CDC42BPA-209ENST00000448940 RAB22AQ9UL26 194 aa4.84□□□□□ -1.63
CDC42BPA-209ENST00000448940 RNF24Q9Y225 148 aa4.84□□□□□ -1.63
CDC42BPA-209ENST00000448940 HSPE1-MOB4S4R3N1 261 aa4.84□□□□□ -1.63
CDC42BPA-209ENST00000448940 TRAV18A0A075B6X5 111 aa4.84□□□□□ -1.63
CDC42BPA-209ENST00000448940 M0QZK8 103 aa4.84□□□□□ -1.63
CDC42BPA-209ENST00000448940 GRNP28799 593 aaKnown RBP4.84□□□□□ -1.63
CDC42BPA-209ENST00000448940 MRPL19P49406 292 aaKnown RBP4.84□□□□□ -1.63
CDC42BPA-209ENST00000448940 TIAL1Q01085 375 aaKnown RBP eCLIP4.84□□□□□ -1.63
CDC42BPA-209ENST00000448940 EGR3Q06889 387 aa4.84□□□□□ -1.63
CDC42BPA-209ENST00000448940 RGS21Q2M5E4 152 aa4.84□□□□□ -1.63
CDC42BPA-209ENST00000448940 ZNF404Q494X3 552 aa4.84□□□□□ -1.63
CDC42BPA-209ENST00000448940 DLEU7Q6UYE1 221 aa4.84□□□□□ -1.63
CDC42BPA-209ENST00000448940 NTNG2Q96CW9 530 aa4.84□□□□□ -1.63
CDC42BPA-209ENST00000448940 SLC35E1Q96K37 410 aa4.84□□□□□ -1.63
CDC42BPA-209ENST00000448940 TCEAL7Q9BRU2 100 aa4.84□□□□□ -1.63
CDC42BPA-209ENST00000448940 PKIBQ9C010 78 aa4.84□□□□□ -1.63
CDC42BPA-209ENST00000448940 TNFRSF12AQ9NP84 129 aa4.84□□□□□ -1.63
CDC42BPA-209ENST00000448940 NOX4Q9NPH5 578 aa4.84□□□□□ -1.63
CDC42BPA-209ENST00000448940 DHRS3O75911 302 aa4.84□□□□□ -1.63
CDC42BPA-209ENST00000448940 LY6HO94772 140 aa4.84□□□□□ -1.63
CDC42BPA-209ENST00000448940 BGLAPP02818 100 aa4.84□□□□□ -1.63
CDC42BPA-209ENST00000448940 NCMAPQ5T1S8 102 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms