RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 CEACAM3P40198 252 aa12.36□□□□□ -0.43
TRA2A-203ENST00000448549 OR3A4PP47883 348 aa12.36□□□□□ -0.43
TRA2A-203ENST00000448549 NANOS3P60323 173 aaKnown RBP12.36□□□□□ -0.43
TRA2A-203ENST00000448549 RBM39Q14498 530 aaKnown RBP12.36□□□□□ -0.43
TRA2A-203ENST00000448549 HLA-DRB5Q30154 266 aa12.36□□□□□ -0.43
TRA2A-203ENST00000448549 OR4D6Q8NGJ1 314 aa12.36□□□□□ -0.43
TRA2A-203ENST00000448549 OR10AC1Q8NH08 325 aa12.36□□□□□ -0.43
TRA2A-203ENST00000448549 MBOAT4Q96T53 435 aa12.36□□□□□ -0.43
TRA2A-203ENST00000448549 PCDHGB5Q9Y5G0 923 aa12.36□□□□□ -0.43
TRA2A-203ENST00000448549 DNAH3Q8TD57 4116 aa12.36□□□□□ -0.43
TRA2A-203ENST00000448549 HOXD3P31249 432 aaPredicted RBP12.35□□□□□ -0.43
TRA2A-203ENST00000448549 PTGFRP43088 359 aa12.35□□□□□ -0.43
TRA2A-203ENST00000448549 PRRX1P54821 245 aa12.35□□□□□ -0.43
TRA2A-203ENST00000448549 KRBOX4Q5JUW0 171 aa12.35□□□□□ -0.43
TRA2A-203ENST00000448549 C11orf87Q6NUJ2 197 aa12.35□□□□□ -0.43
TRA2A-203ENST00000448549 Q6P435 159 aa12.35□□□□□ -0.43
TRA2A-203ENST00000448549 OR51A4Q8NGJ6 313 aa12.35□□□□□ -0.43
TRA2A-203ENST00000448549 OR13C9Q8NGT0 318 aa12.35□□□□□ -0.43
TRA2A-203ENST00000448549 CREB3L1Q96BA8 519 aa12.35□□□□□ -0.43
TRA2A-203ENST00000448549 COQ2Q96H96 371 aa12.35□□□□□ -0.43
TRA2A-203ENST00000448549 GABARAPL3Q9BY60 117 aa12.35□□□□□ -0.43
TRA2A-203ENST00000448549 COMMD4Q9H0A8 199 aa12.35□□□□□ -0.43
TRA2A-203ENST00000448549 NEK6Q9HC98 313 aa12.35□□□□□ -0.43
TRA2A-203ENST00000448549 A0A087X0M5 115 aa12.34□□□□□ -0.43
TRA2A-203ENST00000448549 A0A1B0GX30 115 aa12.34□□□□□ -0.43
TRA2A-203ENST00000448549 SLC33A1O00400 549 aaPredicted RBP12.34□□□□□ -0.43
TRA2A-203ENST00000448549 DEGS1O15121 323 aa12.34□□□□□ -0.43
TRA2A-203ENST00000448549 DUS4LO95620 317 aaKnown RBP12.34□□□□□ -0.43
TRA2A-203ENST00000448549 CLIC3O95833 236 aa12.34□□□□□ -0.43
TRA2A-203ENST00000448549 CSN2P05814 226 aa12.34□□□□□ -0.43
TRA2A-203ENST00000448549 NFYBP25208 207 aa12.34□□□□□ -0.43
TRA2A-203ENST00000448549 MNDAP41218 407 aa12.34□□□□□ -0.43
TRA2A-203ENST00000448549 ATXN7L3Q14CW9 347 aaPredicted RBP12.34□□□□□ -0.43
TRA2A-203ENST00000448549 C17orf58Q2M2W7 97 aa12.34□□□□□ -0.43
TRA2A-203ENST00000448549 CCDC144NLQ6NUI1 221 aa12.34□□□□□ -0.43
TRA2A-203ENST00000448549 FDX2Q6P4F2 183 aa12.34□□□□□ -0.43
TRA2A-203ENST00000448549 KCTD20Q7Z5Y7 419 aa12.34□□□□□ -0.43
TRA2A-203ENST00000448549 OSR2Q8N2R0 312 aa12.34□□□□□ -0.43
TRA2A-203ENST00000448549 LINC00482Q8N8I6 264 aa12.34□□□□□ -0.43
TRA2A-203ENST00000448549 OR13C3Q8NGS6 347 aa12.34□□□□□ -0.43
TRA2A-203ENST00000448549 PPIL3Q9H2H8 161 aaKnown RBP12.34□□□□□ -0.43
TRA2A-203ENST00000448549 OAZ3Q9UMX2 235 aa12.34□□□□□ -0.43
TRA2A-203ENST00000448549 DAPL1A0PJW8 107 aa12.33□□□□□ -0.44
TRA2A-203ENST00000448549 ZNF729A6NN14 1252 aaPredicted RBP12.33□□□□□ -0.44
TRA2A-203ENST00000448549 OOSP1A8MZH6 123 aa12.33□□□□□ -0.44
TRA2A-203ENST00000448549 M0QZK8 103 aa12.33□□□□□ -0.44
TRA2A-203ENST00000448549 SLC16A6O15403 523 aa12.33□□□□□ -0.44
TRA2A-203ENST00000448549 MT-ND2P03891 347 aa12.33□□□□□ -0.44
TRA2A-203ENST00000448549 HTR1AP08908 422 aa12.33□□□□□ -0.44
TRA2A-203ENST00000448549 FAM106CPP0CH98 169 aa12.33□□□□□ -0.44
TRA2A-203ENST00000448549 ZNF329Q86UD4 541 aa12.33□□□□□ -0.44
TRA2A-203ENST00000448549 MRPL41Q8IXM3 137 aaKnown RBP12.33□□□□□ -0.44
TRA2A-203ENST00000448549 SAXO1Q8IYX7 474 aa12.33□□□□□ -0.44
TRA2A-203ENST00000448549 CHST4Q8NCG5 386 aa12.33□□□□□ -0.44
TRA2A-203ENST00000448549 RNFT2Q96EX2 444 aa12.33□□□□□ -0.44
TRA2A-203ENST00000448549 HRASLS5Q96KN8 279 aa12.33□□□□□ -0.44
TRA2A-203ENST00000448549 OSBPL10Q9BXB5 764 aa12.33□□□□□ -0.44
TRA2A-203ENST00000448549 KBTBD11-OT1A0A1B0GTJ5 212 aa12.32□□□□□ -0.44
TRA2A-203ENST00000448549 PSMB11A5LHX3 300 aa12.32□□□□□ -0.44
TRA2A-203ENST00000448549 J3QLW9 94 aa12.32□□□□□ -0.44
TRA2A-203ENST00000448549 J3QRE1 110 aa12.32□□□□□ -0.44
TRA2A-203ENST00000448549 IGHV3-7P01780 117 aa12.32□□□□□ -0.44
TRA2A-203ENST00000448549 TMEM225BP0DP42 221 aa12.32□□□□□ -0.44
TRA2A-203ENST00000448549 FCGR1AP12314 374 aa12.32□□□□□ -0.44
TRA2A-203ENST00000448549 ZNF19P17023 458 aa12.32□□□□□ -0.44
TRA2A-203ENST00000448549 CCR9P51686 369 aa12.32□□□□□ -0.44
TRA2A-203ENST00000448549 EGFEM1PQ0D2K5 195 aa12.32□□□□□ -0.44
TRA2A-203ENST00000448549 CDK5R1Q15078 307 aa12.32□□□□□ -0.44
TRA2A-203ENST00000448549 OR9G1Q8NH87 305 aa12.32□□□□□ -0.44
TRA2A-203ENST00000448549 RPEQ96AT9 228 aa12.32□□□□□ -0.44
TRA2A-203ENST00000448549 KIRREL1Q96J84 757 aa12.32□□□□□ -0.44
TRA2A-203ENST00000448549 ZNF649Q9BS31 505 aa12.32□□□□□ -0.44
TRA2A-203ENST00000448549 ZCCHC4Q9H5U6 513 aa12.32□□□□□ -0.44
TRA2A-203ENST00000448549 RHOFQ9HBH0 211 aa12.32□□□□□ -0.44
TRA2A-203ENST00000448549 IMPAD1Q9NX62 359 aa12.32□□□□□ -0.44
TRA2A-203ENST00000448549 OR6C3Q9NZP0 311 aa12.32□□□□□ -0.44
TRA2A-203ENST00000448549 MYRFQ9Y2G1 1151 aa12.32□□□□□ -0.44
TRA2A-203ENST00000448549 MOB4Q9Y3A3 225 aa12.32□□□□□ -0.44
TRA2A-203ENST00000448549 HSPE1-MOB4S4R3N1 261 aa12.32□□□□□ -0.44
TRA2A-203ENST00000448549 NBEAL2Q6ZNJ1 2754 aa12.32□□□□□ -0.44
TRA2A-203ENST00000448549 FAM90A18PA6NE21 464 aa12.31□□□□□ -0.44
TRA2A-203ENST00000448549 FAM90A16PA6NEW6 464 aa12.31□□□□□ -0.44
TRA2A-203ENST00000448549 FAM90A20PA6NIJ5 464 aa12.31□□□□□ -0.44
TRA2A-203ENST00000448549 SAC3D1A6NKF1 404 aa12.31□□□□□ -0.44
TRA2A-203ENST00000448549 OR4C45A6NMZ5 311 aa12.31□□□□□ -0.44
TRA2A-203ENST00000448549 FAM90A9PA6NNJ1 464 aa12.31□□□□□ -0.44
TRA2A-203ENST00000448549 FAM90A12PA8MX19 464 aa12.31□□□□□ -0.44
TRA2A-203ENST00000448549 FAM90A5PA8MXJ8 464 aa12.31□□□□□ -0.44
TRA2A-203ENST00000448549 HSPB6O14558 160 aa12.31□□□□□ -0.44
TRA2A-203ENST00000448549 SNRNP70P08621 437 aaKnown RBP12.31□□□□□ -0.44
TRA2A-203ENST00000448549 FAM90A15PP0C7V4 464 aa12.31□□□□□ -0.44
TRA2A-203ENST00000448549 FAM90A13PP0C7W8 464 aa12.31□□□□□ -0.44
TRA2A-203ENST00000448549 FAM90A14PP0C7W9 464 aa12.31□□□□□ -0.44
TRA2A-203ENST00000448549 FAM90A24PP0C7X0 464 aa12.31□□□□□ -0.44
TRA2A-203ENST00000448549 CGB3P0DN86 165 aa12.31□□□□□ -0.44
TRA2A-203ENST00000448549 CGB7P0DN87 165 aa12.31□□□□□ -0.44
TRA2A-203ENST00000448549 BNIP1Q12981 228 aa12.31□□□□□ -0.44
TRA2A-203ENST00000448549 C1orf146Q5VVC0 180 aa12.31□□□□□ -0.44
TRA2A-203ENST00000448549 ETV3LQ6ZN32 361 aa12.31□□□□□ -0.44
TRA2A-203ENST00000448549 THNSL2Q86YJ6 484 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms