RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 JAM3Q9BX67 310 aa15.9■□□□□ 0.14
VCP-203ENST00000448530 ING3Q9NXR8 418 aa15.9■□□□□ 0.14
VCP-203ENST00000448530 TAS2R3Q9NYW6 316 aa15.9■□□□□ 0.14
VCP-203ENST00000448530 A6NDX4 124 aa15.89■□□□□ 0.13
VCP-203ENST00000448530 CSN2P05814 226 aa15.89■□□□□ 0.13
VCP-203ENST00000448530 LIMS3P0CW19 117 aa15.89■□□□□ 0.13
VCP-203ENST00000448530 LIMS4P0CW20 117 aa15.89■□□□□ 0.13
VCP-203ENST00000448530 MYL12AP19105 171 aa15.89■□□□□ 0.13
VCP-203ENST00000448530 CDK2P24941 298 aa15.89■□□□□ 0.13
VCP-203ENST00000448530 DCKP27707 260 aa15.89■□□□□ 0.13
VCP-203ENST00000448530 GLIPR1P48060 266 aa15.89■□□□□ 0.13
VCP-203ENST00000448530 DYNLT3P51808 116 aa15.89■□□□□ 0.13
VCP-203ENST00000448530 GTF2A1P52655 376 aaPredicted RBP15.89■□□□□ 0.13
VCP-203ENST00000448530 ZP1P60852 638 aa15.89■□□□□ 0.13
VCP-203ENST00000448530 CCDC58Q4VC31 144 aa15.89■□□□□ 0.13
VCP-203ENST00000448530 KRBOX4Q5JUW0 171 aa15.89■□□□□ 0.13
VCP-203ENST00000448530 LDLRAD2Q5SZI1 272 aa15.89■□□□□ 0.13
VCP-203ENST00000448530 PRAMEF5Q5TYX0 476 aa15.89■□□□□ 0.13
VCP-203ENST00000448530 RPL22L1Q6P5R6 122 aaKnown RBP15.89■□□□□ 0.13
VCP-203ENST00000448530 HEPN1Q6WQI6 88 aa15.89■□□□□ 0.13
VCP-203ENST00000448530 RTN4RL2Q86UN3 420 aa15.89■□□□□ 0.13
VCP-203ENST00000448530 ABHD12Q8N2K0 398 aa15.89■□□□□ 0.13
VCP-203ENST00000448530 OR4D6Q8NGJ1 314 aa15.89■□□□□ 0.13
VCP-203ENST00000448530 ZNF596Q8TC21 504 aa15.89■□□□□ 0.13
VCP-203ENST00000448530 CYGBQ8WWM9 190 aa15.89■□□□□ 0.13
VCP-203ENST00000448530 CORO2AQ92828 525 aa15.89■□□□□ 0.13
VCP-203ENST00000448530 PRSS22Q9GZN4 317 aa15.89■□□□□ 0.13
VCP-203ENST00000448530 FOXJ3Q9UPW0 622 aa15.89■□□□□ 0.13
VCP-203ENST00000448530 ODAMA1E959 279 aa15.88■□□□□ 0.13
VCP-203ENST00000448530 SLC33A1O00400 549 aaPredicted RBP15.88■□□□□ 0.13
VCP-203ENST00000448530 PEX14O75381 377 aa15.88■□□□□ 0.13
VCP-203ENST00000448530 WBP4O75554 376 aaKnown RBP15.88■□□□□ 0.13
VCP-203ENST00000448530 MMP23AO75900 390 aa15.88■□□□□ 0.13
VCP-203ENST00000448530 PTGFRP43088 359 aa15.88■□□□□ 0.13
VCP-203ENST00000448530 ARHGDIBP52566 201 aa15.88■□□□□ 0.13
VCP-203ENST00000448530 MED21Q13503 144 aa15.88■□□□□ 0.13
VCP-203ENST00000448530 ATXN7L3Q14CW9 347 aaPredicted RBP15.88■□□□□ 0.13
VCP-203ENST00000448530 TTC23Q5W5X9 447 aa15.88■□□□□ 0.13
VCP-203ENST00000448530 Q6P435 159 aa15.88■□□□□ 0.13
VCP-203ENST00000448530 C11orf44Q8N8P7 122 aa15.88■□□□□ 0.13
VCP-203ENST00000448530 PXT1Q8NFP0 134 aa15.88■□□□□ 0.13
VCP-203ENST00000448530 TNFAIP8L1Q8WVP5 186 aa15.88■□□□□ 0.13
VCP-203ENST00000448530 NR1H4Q96RI1 486 aaPredicted RBP15.88■□□□□ 0.13
VCP-203ENST00000448530 FAM192AQ9GZU8 254 aa15.88■□□□□ 0.13
VCP-203ENST00000448530 CHCHD3Q9NX63 227 aaKnown RBP15.88■□□□□ 0.13
VCP-203ENST00000448530 NOTCH1P46531 2555 aa15.88■□□□□ 0.13
VCP-203ENST00000448530 TOR1AO14656 332 aa15.87■□□□□ 0.13
VCP-203ENST00000448530 ETV1P50549 477 aa15.87■□□□□ 0.13
VCP-203ENST00000448530 PPP3R1P63098 170 aa15.87■□□□□ 0.13
VCP-203ENST00000448530 CDK5R1Q15078 307 aa15.87■□□□□ 0.13
VCP-203ENST00000448530 RSU1Q15404 277 aa15.87■□□□□ 0.13
VCP-203ENST00000448530 LRRC36Q1X8D7 754 aa15.87■□□□□ 0.13
VCP-203ENST00000448530 CCBE1Q6UXH8 406 aaPredicted RBP15.87■□□□□ 0.13
VCP-203ENST00000448530 SETD9Q8NE22 299 aa15.87■□□□□ 0.13
VCP-203ENST00000448530 CNIH3Q8TBE1 160 aa15.87■□□□□ 0.13
VCP-203ENST00000448530 ZNF702PQ9H963 129 aa15.87■□□□□ 0.13
VCP-203ENST00000448530 C8orf4Q9NR00 106 aa15.87■□□□□ 0.13
VCP-203ENST00000448530 TAS2R4Q9NYW5 299 aa15.87■□□□□ 0.13
VCP-203ENST00000448530 OR6C3Q9NZP0 311 aa15.87■□□□□ 0.13
VCP-203ENST00000448530 DPM3Q9P2X0 92 aa15.87■□□□□ 0.13
VCP-203ENST00000448530 EXOSC1Q9Y3B2 195 aaKnown RBP15.87■□□□□ 0.13
VCP-203ENST00000448530 H0YJX3 145 aa15.86■□□□□ 0.13
VCP-203ENST00000448530 GABRPO00591 440 aa15.86■□□□□ 0.13
VCP-203ENST00000448530 HSPB6O14558 160 aa15.86■□□□□ 0.13
VCP-203ENST00000448530 BRS3P32247 399 aa15.86■□□□□ 0.13
VCP-203ENST00000448530 CEACAM3P40198 252 aa15.86■□□□□ 0.13
VCP-203ENST00000448530 PDLIM3Q53GG5 364 aaPredicted RBP15.86■□□□□ 0.13
VCP-203ENST00000448530 PAN3Q58A45 887 aaKnown RBP15.86■□□□□ 0.13
VCP-203ENST00000448530 OR2G6Q5TZ20 316 aa15.86■□□□□ 0.13
VCP-203ENST00000448530 ELP2Q6IA86 826 aa15.86■□□□□ 0.13
VCP-203ENST00000448530 OR4P4Q8NGL7 312 aa15.86■□□□□ 0.13
VCP-203ENST00000448530 CAPSLQ8WWF8 208 aa15.86■□□□□ 0.13
VCP-203ENST00000448530 TMEM106AQ96A25 262 aa15.86■□□□□ 0.13
VCP-203ENST00000448530 CREB3L1Q96BA8 519 aa15.86■□□□□ 0.13
VCP-203ENST00000448530 COQ2Q96H96 371 aa15.86■□□□□ 0.13
VCP-203ENST00000448530 FAM172BPA6NC97 362 aa15.85■□□□□ 0.13
VCP-203ENST00000448530 ZNF729A6NN14 1252 aaPredicted RBP15.85■□□□□ 0.13
VCP-203ENST00000448530 LEUTXA8MZ59 168 aa15.85■□□□□ 0.13
VCP-203ENST00000448530 CLIC3O95833 236 aa15.85■□□□□ 0.13
VCP-203ENST00000448530 ALDOBP05062 364 aa15.85■□□□□ 0.13
VCP-203ENST00000448530 JUNBP17275 347 aaPredicted RBP15.85■□□□□ 0.13
VCP-203ENST00000448530 PRRX1P54821 245 aa15.85■□□□□ 0.13
VCP-203ENST00000448530 BDH1Q02338 343 aa15.85■□□□□ 0.13
VCP-203ENST00000448530 HABP2Q14520 560 aaPredicted RBP15.85■□□□□ 0.13
VCP-203ENST00000448530 XAF1Q6GPH4 301 aa15.85■□□□□ 0.13
VCP-203ENST00000448530 ZNF529Q6P280 563 aa15.85■□□□□ 0.13
VCP-203ENST00000448530 Q8N2B8 174 aa15.85■□□□□ 0.13
VCP-203ENST00000448530 PACRGLQ8N7B6 248 aa15.85■□□□□ 0.13
VCP-203ENST00000448530 ZNF565Q8N9K5 539 aa15.85■□□□□ 0.13
VCP-203ENST00000448530 OR51A2Q8NGJ7 313 aa15.85■□□□□ 0.13
VCP-203ENST00000448530 CFHR4Q92496 578 aa15.85■□□□□ 0.13
VCP-203ENST00000448530 RGP1Q92546 391 aaPredicted RBP15.85■□□□□ 0.13
VCP-203ENST00000448530 AKR1E2Q96JD6 320 aa15.85■□□□□ 0.13
VCP-203ENST00000448530 S100A13Q99584 98 aa15.85■□□□□ 0.13
VCP-203ENST00000448530 BARHL1Q9BZE3 327 aa15.85■□□□□ 0.13
VCP-203ENST00000448530 BABAM2Q9NXR7 383 aa15.85■□□□□ 0.13
VCP-203ENST00000448530 DIMT1Q9UNQ2 313 aaKnown RBP15.85■□□□□ 0.13
VCP-203ENST00000448530 FBXO24O75426 580 aa15.84■□□□□ 0.13
VCP-203ENST00000448530 HTR3BO95264 441 aa15.84■□□□□ 0.13
VCP-203ENST00000448530 NFYBP25208 207 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms