RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 PTGFRP43088 359 aa11.32□□□□□ -0.6
PDLIM2-213ENST00000448520 SNU13P55769 128 aaKnown RBP11.32□□□□□ -0.6
PDLIM2-213ENST00000448520 RAB11BQ15907 218 aa11.32□□□□□ -0.6
PDLIM2-213ENST00000448520 MIDNQ504T8 468 aa11.32□□□□□ -0.6
PDLIM2-213ENST00000448520 IDNKQ5T6J7 187 aa11.32□□□□□ -0.6
PDLIM2-213ENST00000448520 AWAT2Q6E213 333 aa11.32□□□□□ -0.6
PDLIM2-213ENST00000448520 OR10K2Q6IF99 312 aa11.32□□□□□ -0.6
PDLIM2-213ENST00000448520 SFXN4Q6P4A7 337 aa11.32□□□□□ -0.6
PDLIM2-213ENST00000448520 GLIPR1L1Q6UWM5 242 aa11.32□□□□□ -0.6
PDLIM2-213ENST00000448520 GCSAMQ8N6F7 178 aa11.32□□□□□ -0.6
PDLIM2-213ENST00000448520 DMRTB1Q96MA1 342 aa11.32□□□□□ -0.6
PDLIM2-213ENST00000448520 TBX15Q96SF7 602 aa11.32□□□□□ -0.6
PDLIM2-213ENST00000448520 CITED1Q99966 193 aa11.32□□□□□ -0.6
PDLIM2-213ENST00000448520 PKIBQ9C010 78 aa11.32□□□□□ -0.6
PDLIM2-213ENST00000448520 ELL3Q9HB65 397 aaPredicted RBP11.32□□□□□ -0.6
PDLIM2-213ENST00000448520 TNFRSF19Q9NS68 423 aa11.32□□□□□ -0.6
PDLIM2-213ENST00000448520 RBFOX1Q9NWB1 397 aaKnown RBP11.32□□□□□ -0.6
PDLIM2-213ENST00000448520 IL36RNQ9UBH0 155 aa11.32□□□□□ -0.6
PDLIM2-213ENST00000448520 KAAG1Q9UBP8 84 aa11.32□□□□□ -0.6
PDLIM2-213ENST00000448520 CTSZQ9UBR2 303 aa11.32□□□□□ -0.6
PDLIM2-213ENST00000448520 DAPK2Q9UIK4 370 aa11.32□□□□□ -0.6
PDLIM2-213ENST00000448520 IGHV1-69DA0A0B4J2H0 117 aa11.31□□□□□ -0.6
PDLIM2-213ENST00000448520 M0QZ24 198 aa11.31□□□□□ -0.6
PDLIM2-213ENST00000448520 SLC22A1O15245 554 aa11.31□□□□□ -0.6
PDLIM2-213ENST00000448520 HTR3BO95264 441 aa11.31□□□□□ -0.6
PDLIM2-213ENST00000448520 PAHP00439 452 aa11.31□□□□□ -0.6
PDLIM2-213ENST00000448520 LHBP01229 141 aa11.31□□□□□ -0.6
PDLIM2-213ENST00000448520 IGHV1-69P01742 117 aa11.31□□□□□ -0.6
PDLIM2-213ENST00000448520 SNRPBP14678 240 aaKnown RBP11.31□□□□□ -0.6
PDLIM2-213ENST00000448520 SERPINA2P20848 420 aa11.31□□□□□ -0.6
PDLIM2-213ENST00000448520 HTR2CP28335 458 aa11.31□□□□□ -0.6
PDLIM2-213ENST00000448520 IL24Q13007 206 aa11.31□□□□□ -0.6
PDLIM2-213ENST00000448520 SLC22A6Q4U2R8 563 aa11.31□□□□□ -0.6
PDLIM2-213ENST00000448520 RUSC1-AS1Q66K80 236 aa11.31□□□□□ -0.6
PDLIM2-213ENST00000448520 POC1AQ8NBT0 407 aa11.31□□□□□ -0.6
PDLIM2-213ENST00000448520 OR51D1Q8NGF3 324 aa11.31□□□□□ -0.6
PDLIM2-213ENST00000448520 OR6M1Q8NGM8 313 aa11.31□□□□□ -0.6
PDLIM2-213ENST00000448520 DYNC2LI1Q8TCX1 351 aa11.31□□□□□ -0.6
PDLIM2-213ENST00000448520 FAM46BQ96A09 425 aa11.31□□□□□ -0.6
PDLIM2-213ENST00000448520 CYYR1Q96J86 154 aa11.31□□□□□ -0.6
PDLIM2-213ENST00000448520 BCL7BQ9BQE9 202 aa11.31□□□□□ -0.6
PDLIM2-213ENST00000448520 DCUN1D5Q9BTE7 237 aa11.31□□□□□ -0.6
PDLIM2-213ENST00000448520 BANF2Q9H503 90 aa11.31□□□□□ -0.6
PDLIM2-213ENST00000448520 SMURF1Q9HCE7 757 aa11.31□□□□□ -0.6
PDLIM2-213ENST00000448520 CMYA5Q8N3K9 4069 aa11.3□□□□□ -0.6
PDLIM2-213ENST00000448520 AIPO00170 330 aa11.3□□□□□ -0.6
PDLIM2-213ENST00000448520 KDM4BO94953 1096 aa11.3□□□□□ -0.6
PDLIM2-213ENST00000448520 GYPAP02724 150 aa11.3□□□□□ -0.6
PDLIM2-213ENST00000448520 PGA5P0DJD9 388 aa11.3□□□□□ -0.6
PDLIM2-213ENST00000448520 ZNF182P17025 639 aaPredicted RBP11.3□□□□□ -0.6
PDLIM2-213ENST00000448520 ARF6P62330 175 aa11.3□□□□□ -0.6
PDLIM2-213ENST00000448520 RELBQ01201 579 aa11.3□□□□□ -0.6
PDLIM2-213ENST00000448520 TEX36Q5VZQ5 186 aa11.3□□□□□ -0.6
PDLIM2-213ENST00000448520 BRICD5Q6PL45 260 aa11.3□□□□□ -0.6
PDLIM2-213ENST00000448520 ASCL4Q6XD76 172 aa11.3□□□□□ -0.6
PDLIM2-213ENST00000448520 BTN2A1Q7KYR7 527 aa11.3□□□□□ -0.6
PDLIM2-213ENST00000448520 CDH26Q8IXH8 852 aa11.3□□□□□ -0.6
PDLIM2-213ENST00000448520 MKXQ8IYA7 352 aa11.3□□□□□ -0.6
PDLIM2-213ENST00000448520 TMEM104Q8NE00 496 aa11.3□□□□□ -0.6
PDLIM2-213ENST00000448520 OR5T2Q8NGG2 359 aa11.3□□□□□ -0.6
PDLIM2-213ENST00000448520 OR5H6Q8NGV6 325 aa11.3□□□□□ -0.6
PDLIM2-213ENST00000448520 ZNF671Q8TAW3 534 aa11.3□□□□□ -0.6
PDLIM2-213ENST00000448520 SLC25A46Q96AG3 418 aa11.3□□□□□ -0.6
PDLIM2-213ENST00000448520 FOXRED1Q96CU9 486 aaPredicted RBP11.3□□□□□ -0.6
PDLIM2-213ENST00000448520 DGCR14Q96DF8 476 aaKnown RBP11.3□□□□□ -0.6
PDLIM2-213ENST00000448520 CEP19Q96LK0 163 aa11.3□□□□□ -0.6
PDLIM2-213ENST00000448520 NRIP2Q9BQI9 281 aa11.3□□□□□ -0.6
PDLIM2-213ENST00000448520 UQCC2Q9BRT2 126 aa11.3□□□□□ -0.6
PDLIM2-213ENST00000448520 SIRPDQ9H106 197 aa11.3□□□□□ -0.6
PDLIM2-213ENST00000448520 MMP27Q9H306 513 aa11.3□□□□□ -0.6
PDLIM2-213ENST00000448520 DPAGT1Q9H3H5 408 aa11.3□□□□□ -0.6
PDLIM2-213ENST00000448520 ZNF581Q9P0T4 197 aa11.3□□□□□ -0.6
PDLIM2-213ENST00000448520 STEAP1Q9UHE8 339 aa11.3□□□□□ -0.6
PDLIM2-213ENST00000448520 POLDIP2Q9Y2S7 368 aa11.3□□□□□ -0.6
PDLIM2-213ENST00000448520 RNF114Q9Y508 228 aa11.3□□□□□ -0.6
PDLIM2-213ENST00000448520 KPTNQ9Y664 436 aa11.3□□□□□ -0.6
PDLIM2-213ENST00000448520 TGP01266 2768 aa11.3□□□□□ -0.6
PDLIM2-213ENST00000448520 DVL1O14640 695 aa11.29□□□□□ -0.6
PDLIM2-213ENST00000448520 GPR37O15354 613 aa11.29□□□□□ -0.6
PDLIM2-213ENST00000448520 CLPXO76031 633 aa11.29□□□□□ -0.6
PDLIM2-213ENST00000448520 VSIG8P0DPA2 414 aa11.29□□□□□ -0.6
PDLIM2-213ENST00000448520 MUC1P15941 1255 aaPredicted RBP11.29□□□□□ -0.6
PDLIM2-213ENST00000448520 GLRA1P23415 457 aa11.29□□□□□ -0.6
PDLIM2-213ENST00000448520 DUSP1P28562 367 aa11.29□□□□□ -0.6
PDLIM2-213ENST00000448520 CEBPDP49716 269 aaPredicted RBP11.29□□□□□ -0.6
PDLIM2-213ENST00000448520 ERVK11-1P61568 191 aa11.29□□□□□ -0.6
PDLIM2-213ENST00000448520 SRSF4Q08170 494 aaKnown RBP11.29□□□□□ -0.6
PDLIM2-213ENST00000448520 RSU1Q15404 277 aa11.29□□□□□ -0.6
PDLIM2-213ENST00000448520 MICBQ29980 383 aa11.29□□□□□ -0.6
PDLIM2-213ENST00000448520 C2orf76Q3KRA6 126 aa11.29□□□□□ -0.6
PDLIM2-213ENST00000448520 LDLRAD3Q86YD5 345 aa11.29□□□□□ -0.6
PDLIM2-213ENST00000448520 FAM90A1Q86YD7 464 aa11.29□□□□□ -0.6
PDLIM2-213ENST00000448520 SAXO1Q8IYX7 474 aa11.29□□□□□ -0.6
PDLIM2-213ENST00000448520 ZSCAN4Q8NAM6 433 aaPredicted RBP11.29□□□□□ -0.6
PDLIM2-213ENST00000448520 PXT1Q8NFP0 134 aa11.29□□□□□ -0.6
PDLIM2-213ENST00000448520 LGALS14Q8TCE9 139 aa11.29□□□□□ -0.6
PDLIM2-213ENST00000448520 EMG1Q92979 244 aaKnown RBP11.29□□□□□ -0.6
PDLIM2-213ENST00000448520 LHX4Q969G2 390 aa11.29□□□□□ -0.6
PDLIM2-213ENST00000448520 FAM3DQ96BQ1 224 aa11.29□□□□□ -0.6
PDLIM2-213ENST00000448520 CPNE2Q96FN4 548 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms