RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 ZNF79Q15937 498 aa3.01□□□□□ -1.93
HMGB1P48-201ENST00000446155 DEFB115Q30KQ5 88 aa3.01□□□□□ -1.93
HMGB1P48-201ENST00000446155 ACTBL2Q562R1 376 aa3.01□□□□□ -1.93
HMGB1P48-201ENST00000446155 PDZD11Q5EBL8 140 aa3.01□□□□□ -1.93
HMGB1P48-201ENST00000446155 LAMTOR1Q6IAA8 161 aa3.01□□□□□ -1.93
HMGB1P48-201ENST00000446155 TMEM205Q6UW68 189 aa3.01□□□□□ -1.93
HMGB1P48-201ENST00000446155 Q6ZSR6 202 aa3.01□□□□□ -1.93
HMGB1P48-201ENST00000446155 MDP1Q86V88 176 aa3.01□□□□□ -1.93
HMGB1P48-201ENST00000446155 DRAM1Q8N682 238 aa3.01□□□□□ -1.93
HMGB1P48-201ENST00000446155 OR5T1Q8NG75 326 aa3.01□□□□□ -1.93
HMGB1P48-201ENST00000446155 OR1J4Q8NGS1 313 aa3.01□□□□□ -1.93
HMGB1P48-201ENST00000446155 LINC01006Q8NI28 216 aa3.01□□□□□ -1.93
HMGB1P48-201ENST00000446155 C22orf15Q8WYQ4 148 aa3.01□□□□□ -1.93
HMGB1P48-201ENST00000446155 S100PBPQ96BU1 408 aa3.01□□□□□ -1.93
HMGB1P48-201ENST00000446155 SNF8Q96H20 258 aa3.01□□□□□ -1.93
HMGB1P48-201ENST00000446155 OR10C1Q96KK4 312 aa3.01□□□□□ -1.93
HMGB1P48-201ENST00000446155 CEP170P1Q96L14 293 aa3.01□□□□□ -1.93
HMGB1P48-201ENST00000446155 IMMP1LQ96LU5 166 aa3.01□□□□□ -1.93
HMGB1P48-201ENST00000446155 RBP7Q96R05 134 aa3.01□□□□□ -1.93
HMGB1P48-201ENST00000446155 OR4K3Q96R72 315 aa3.01□□□□□ -1.93
HMGB1P48-201ENST00000446155 CAMK2N2Q96S95 79 aa3.01□□□□□ -1.93
HMGB1P48-201ENST00000446155 NRTNQ99748 197 aa3.01□□□□□ -1.93
HMGB1P48-201ENST00000446155 FAAP24Q9BTP7 215 aa3.01□□□□□ -1.93
HMGB1P48-201ENST00000446155 TAPBPLQ9BX59 468 aa3.01□□□□□ -1.93
HMGB1P48-201ENST00000446155 NANOGQ9H9S0 305 aa3.01□□□□□ -1.93
HMGB1P48-201ENST00000446155 NOX3Q9HBY0 568 aa3.01□□□□□ -1.93
HMGB1P48-201ENST00000446155 SLC40A1Q9NP59 571 aa3.01□□□□□ -1.93
HMGB1P48-201ENST00000446155 PLSCR3Q9NRY6 295 aa3.01□□□□□ -1.93
HMGB1P48-201ENST00000446155 PRO0628Q9UI54 55 aa3.01□□□□□ -1.93
HMGB1P48-201ENST00000446155 PRG3Q9Y2Y8 225 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P48-201ENST00000446155 TTC28Q96AY4 2481 aa3.01□□□□□ -1.93
HMGB1P48-201ENST00000446155 CRB1P82279 1406 aa3.01□□□□□ -1.93
HMGB1P48-201ENST00000446155 GTF3C1Q12789 2109 aa3.01□□□□□ -1.93
HMGB1P48-201ENST00000446155 CPDO75976 1380 aa3□□□□□ -1.93
HMGB1P48-201ENST00000446155 CARMIL3Q8ND23 1372 aa3□□□□□ -1.93
HMGB1P48-201ENST00000446155 ABCC11Q96J66 1382 aa3□□□□□ -1.93
HMGB1P48-201ENST00000446155 ANKRD30AQ9BXX3 1397 aa3□□□□□ -1.93
HMGB1P48-201ENST00000446155 VCANP13611 3396 aa3□□□□□ -1.93
HMGB1P48-201ENST00000446155 MAP3K15Q6ZN16 1313 aa3□□□□□ -1.93
HMGB1P48-201ENST00000446155 TRIOBPQ9H2D6 2365 aa3□□□□□ -1.93
HMGB1P48-201ENST00000446155 OR2AT4A6NND4 320 aa3□□□□□ -1.93
HMGB1P48-201ENST00000446155 EFCAB9A8MZ26 197 aa3□□□□□ -1.93
HMGB1P48-201ENST00000446155 M0QZ92 97 aa3□□□□□ -1.93
HMGB1P48-201ENST00000446155 CCRL2O00421 344 aa3□□□□□ -1.93
HMGB1P48-201ENST00000446155 PHYHO14832 338 aa3□□□□□ -1.93
HMGB1P48-201ENST00000446155 TRAPPC3O43617 180 aa3□□□□□ -1.93
HMGB1P48-201ENST00000446155 CCDC22O60826 627 aa3□□□□□ -1.93
HMGB1P48-201ENST00000446155 REM1O75628 298 aa3□□□□□ -1.93
HMGB1P48-201ENST00000446155 APOEP02649 317 aa3□□□□□ -1.93
HMGB1P48-201ENST00000446155 CDK1P06493 297 aa3□□□□□ -1.93
HMGB1P48-201ENST00000446155 UGT2B7P16662 529 aa3□□□□□ -1.93
HMGB1P48-201ENST00000446155 TAC1P20366 129 aa3□□□□□ -1.93
HMGB1P48-201ENST00000446155 GRPRP30550 384 aa3□□□□□ -1.93
HMGB1P48-201ENST00000446155 LGALS7P47929 136 aa3□□□□□ -1.93
HMGB1P48-201ENST00000446155 SLC18A1P54219 525 aa3□□□□□ -1.93
HMGB1P48-201ENST00000446155 GNB2P62879 340 aa3□□□□□ -1.93
HMGB1P48-201ENST00000446155 HBG1P69891 147 aa3□□□□□ -1.93
HMGB1P48-201ENST00000446155 HBG2P69892 147 aa3□□□□□ -1.93
HMGB1P48-201ENST00000446155 PRDX1Q06830 199 aaKnown RBP3□□□□□ -1.93
HMGB1P48-201ENST00000446155 UAP1Q16222 522 aaPredicted RBP3□□□□□ -1.93
HMGB1P48-201ENST00000446155 FBXL19-AS1Q494R0 122 aa3□□□□□ -1.93
HMGB1P48-201ENST00000446155 DNAL1Q4LDG9 190 aa3□□□□□ -1.93
HMGB1P48-201ENST00000446155 DNM1P34Q6PK57 102 aa3□□□□□ -1.93
HMGB1P48-201ENST00000446155 CASP12Q6UXS9 341 aa3□□□□□ -1.93
HMGB1P48-201ENST00000446155 FAM92BQ6ZTR7 304 aa3□□□□□ -1.93
HMGB1P48-201ENST00000446155 FAM183BPQ6ZVS7 135 aa3□□□□□ -1.93
HMGB1P48-201ENST00000446155 SMIM5Q71RC9 77 aa3□□□□□ -1.93
HMGB1P48-201ENST00000446155 SLC13A5Q86YT5 568 aaPredicted RBP3□□□□□ -1.93
HMGB1P48-201ENST00000446155 Q8N402 240 aa3□□□□□ -1.93
HMGB1P48-201ENST00000446155 OR52P1PQ8NH57 321 aa3□□□□□ -1.93
HMGB1P48-201ENST00000446155 CDC26Q8NHZ8 85 aa3□□□□□ -1.93
HMGB1P48-201ENST00000446155 ENKURQ8TC29 256 aa3□□□□□ -1.93
HMGB1P48-201ENST00000446155 SMIM19Q96E16 107 aa3□□□□□ -1.93
HMGB1P48-201ENST00000446155 SMIM8Q96KF7 97 aa3□□□□□ -1.93
HMGB1P48-201ENST00000446155 BMFQ96LC9 184 aa3□□□□□ -1.93
HMGB1P48-201ENST00000446155 FGFR1OP2Q9NVK5 253 aa3□□□□□ -1.93
HMGB1P48-201ENST00000446155 ANAPC11Q9NYG5 84 aa3□□□□□ -1.93
HMGB1P48-201ENST00000446155 EMC3Q9P0I2 261 aa3□□□□□ -1.93
HMGB1P48-201ENST00000446155 ENPP4Q9Y6X5 453 aa3□□□□□ -1.93
HMGB1P48-201ENST00000446155 PIEZO1Q92508 2521 aa3□□□□□ -1.93
HMGB1P48-201ENST00000446155 GCC2Q8IWJ2 1684 aa3□□□□□ -1.93
HMGB1P48-201ENST00000446155 PIKFYVEQ9Y2I7 2098 aa3□□□□□ -1.93
HMGB1P48-201ENST00000446155 PAPPAQ13219 1627 aa3□□□□□ -1.93
HMGB1P48-201ENST00000446155 MYO5BQ9ULV0 1848 aa3□□□□□ -1.93
HMGB1P48-201ENST00000446155 ZNFX1Q9P2E3 1918 aaKnown RBP2.99□□□□□ -1.93
HMGB1P48-201ENST00000446155 COL24A1Q17RW2 1714 aa2.99□□□□□ -1.93
HMGB1P48-201ENST00000446155 IGLV1-50A0A075B6I6 118 aa2.99□□□□□ -1.93
HMGB1P48-201ENST00000446155 CCL15-CCL14A0A0B4J2E2 113 aa2.99□□□□□ -1.93
HMGB1P48-201ENST00000446155 IGHV5-51A0A0C4DH38 117 aa2.99□□□□□ -1.93
HMGB1P48-201ENST00000446155 A0A1B0GXF2 115 aa2.99□□□□□ -1.93
HMGB1P48-201ENST00000446155 A6NDX4 124 aa2.99□□□□□ -1.93
HMGB1P48-201ENST00000446155 CEACAM18A8MTB9 384 aa2.99□□□□□ -1.93
HMGB1P48-201ENST00000446155 LRRN3E7EW58 273 aa2.99□□□□□ -1.93
HMGB1P48-201ENST00000446155 UPK2O00526 184 aa2.99□□□□□ -1.93
HMGB1P48-201ENST00000446155 GPR171O14626 319 aa2.99□□□□□ -1.93
HMGB1P48-201ENST00000446155 BIRC5O15392 142 aa2.99□□□□□ -1.93
HMGB1P48-201ENST00000446155 SPAG7O75391 227 aa2.99□□□□□ -1.93
HMGB1P48-201ENST00000446155 CTDNEP1O95476 244 aa2.99□□□□□ -1.93
HMGB1P48-201ENST00000446155 IFNA5P01569 189 aa2.99□□□□□ -1.93
HMGB1P48-201ENST00000446155 MT-ND4P03905 459 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms