RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 LIFP15018 202 aa11.33□□□□□ -0.6
SLC48A1-201ENST00000442218 GPM6AP51674 278 aa11.33□□□□□ -0.6
SLC48A1-201ENST00000442218 EIF5AP63241 154 aaKnown RBP11.33□□□□□ -0.6
SLC48A1-201ENST00000442218 SLC25A53Q5H9E4 307 aa11.33□□□□□ -0.6
SLC48A1-201ENST00000442218 AAED1Q7RTV5 226 aa11.33□□□□□ -0.6
SLC48A1-201ENST00000442218 ZNF611Q8N823 705 aa11.33□□□□□ -0.6
SLC48A1-201ENST00000442218 FADS6Q8N9I5 356 aa11.33□□□□□ -0.6
SLC48A1-201ENST00000442218 DMBX1Q8NFW5 382 aa11.33□□□□□ -0.6
SLC48A1-201ENST00000442218 OR1F12Q8NHA8 337 aa11.33□□□□□ -0.6
SLC48A1-201ENST00000442218 IL1F10Q8WWZ1 152 aa11.33□□□□□ -0.6
SLC48A1-201ENST00000442218 TM2D1Q9BX74 207 aa11.33□□□□□ -0.6
SLC48A1-201ENST00000442218 LUZP4Q9P127 313 aa11.33□□□□□ -0.6
SLC48A1-201ENST00000442218 NSG2Q9Y328 171 aa11.33□□□□□ -0.6
SLC48A1-201ENST00000442218 USF3Q68DE3 2245 aa11.32□□□□□ -0.6
SLC48A1-201ENST00000442218 BORCS7-ASMTA0A0B4J1R7 106 aa11.32□□□□□ -0.6
SLC48A1-201ENST00000442218 IGKV1D-13A0A0B4J2D9 117 aa11.32□□□□□ -0.6
SLC48A1-201ENST00000442218 ZNF724A8MTY0 619 aa11.32□□□□□ -0.6
SLC48A1-201ENST00000442218 HS3ST1O14792 307 aa11.32□□□□□ -0.6
SLC48A1-201ENST00000442218 TAAR5O14804 337 aa11.32□□□□□ -0.6
SLC48A1-201ENST00000442218 TOX3O15405 576 aaPredicted RBP11.32□□□□□ -0.6
SLC48A1-201ENST00000442218 ST8SIA3O43173 380 aa11.32□□□□□ -0.6
SLC48A1-201ENST00000442218 HLA-HP01893 362 aa11.32□□□□□ -0.6
SLC48A1-201ENST00000442218 IGKV1-13P0DP09 117 aa11.32□□□□□ -0.6
SLC48A1-201ENST00000442218 LSM6P62312 80 aaKnown RBP11.32□□□□□ -0.6
SLC48A1-201ENST00000442218 EWSR1Q01844 656 aaKnown RBP eCLIP11.32□□□□□ -0.65e-7■■■■□ 25.4
SLC48A1-201ENST00000442218 ZNF154Q13106 437 aa11.32□□□□□ -0.6
SLC48A1-201ENST00000442218 MRPL14Q6P1L8 145 aaKnown RBP11.32□□□□□ -0.6
SLC48A1-201ENST00000442218 LIAT1Q6ZQX7 453 aa11.32□□□□□ -0.6
SLC48A1-201ENST00000442218 RPS19BP1Q86WX3 136 aaKnown RBP11.32□□□□□ -0.6
SLC48A1-201ENST00000442218 SKA3Q8IX90 412 aa11.32□□□□□ -0.6
SLC48A1-201ENST00000442218 GPR137CQ8N3F9 429 aa11.32□□□□□ -0.6
SLC48A1-201ENST00000442218 RHBDD1Q8TEB9 315 aa11.32□□□□□ -0.6
SLC48A1-201ENST00000442218 MSI2Q96DH6 328 aaKnown RBP11.32□□□□□ -0.6
SLC48A1-201ENST00000442218 A0A0U1RQV5 110 aa11.32□□□□□ -0.6
SLC48A1-201ENST00000442218 S100A9P06702 114 aaKnown RBP11.32□□□□□ -0.6
SLC48A1-201ENST00000442218 FABP1P07148 127 aa11.32□□□□□ -0.6
SLC48A1-201ENST00000442218 DANCRP0C864 163 aa11.32□□□□□ -0.6
SLC48A1-201ENST00000442218 BCL3P20749 454 aa11.32□□□□□ -0.6
SLC48A1-201ENST00000442218 ATP6V0CP27449 155 aa11.32□□□□□ -0.6
SLC48A1-201ENST00000442218 EIF1P41567 113 aaKnown RBP11.32□□□□□ -0.6
SLC48A1-201ENST00000442218 CARD18P57730 90 aa11.32□□□□□ -0.6
SLC48A1-201ENST00000442218 B2MP61769 119 aa11.32□□□□□ -0.6
SLC48A1-201ENST00000442218 C3AR1Q16581 482 aa11.32□□□□□ -0.6
SLC48A1-201ENST00000442218 C4orf17Q53FE4 359 aa11.32□□□□□ -0.6
SLC48A1-201ENST00000442218 OR5C1Q8NGR4 320 aa11.32□□□□□ -0.6
SLC48A1-201ENST00000442218 RDH5Q92781 318 aa11.32□□□□□ -0.6
SLC48A1-201ENST00000442218 NUDT16L1Q9BRJ7 211 aaKnown RBP11.32□□□□□ -0.6
SLC48A1-201ENST00000442218 HES7Q9BYE0 225 aa11.32□□□□□ -0.6
SLC48A1-201ENST00000442218 TUBD1Q9UJT1 453 aa11.32□□□□□ -0.6
SLC48A1-201ENST00000442218 TIMM10BQ9Y5J6 103 aa11.32□□□□□ -0.6
SLC48A1-201ENST00000442218 RAB5AP20339 215 aa11.31□□□□□ -0.6
SLC48A1-201ENST00000442218 HAAOP46952 286 aa11.31□□□□□ -0.6
SLC48A1-201ENST00000442218 ACER2Q5QJU3 275 aa11.31□□□□□ -0.6
SLC48A1-201ENST00000442218 TBC1D26Q86UD7 250 aa11.31□□□□□ -0.6
SLC48A1-201ENST00000442218 GAPTQ8N292 157 aa11.31□□□□□ -0.6
SLC48A1-201ENST00000442218 C19orf25Q9UFG5 118 aaPredicted RBP11.31□□□□□ -0.6
SLC48A1-201ENST00000442218 MIOXQ9UGB7 285 aa11.31□□□□□ -0.6
SLC48A1-201ENST00000442218 MED12LQ86YW9 2145 aa11.31□□□□□ -0.6
SLC48A1-201ENST00000442218 HMGB3O15347 200 aaKnown RBP11.31□□□□□ -0.6
SLC48A1-201ENST00000442218 SYNGR3O43761 229 aa11.31□□□□□ -0.6
SLC48A1-201ENST00000442218 TMEM50AO95807 157 aa11.31□□□□□ -0.6
SLC48A1-201ENST00000442218 CER1O95813 267 aa11.31□□□□□ -0.6
SLC48A1-201ENST00000442218 SP9P0CG40 484 aa11.31□□□□□ -0.6
SLC48A1-201ENST00000442218 COX6A1P12074 109 aa11.31□□□□□ -0.6
SLC48A1-201ENST00000442218 ZNF16P17020 682 aaPredicted RBP11.31□□□□□ -0.6
SLC48A1-201ENST00000442218 SSR4P51571 173 aa11.31□□□□□ -0.6
SLC48A1-201ENST00000442218 TMEM267Q0VDI3 215 aaPredicted RBP11.31□□□□□ -0.6
SLC48A1-201ENST00000442218 GNMTQ14749 295 aa11.31□□□□□ -0.6
SLC48A1-201ENST00000442218 CLEC12BQ2HXU8 276 aa11.31□□□□□ -0.6
SLC48A1-201ENST00000442218 ZNF818PQ6ZRF7 136 aa11.31□□□□□ -0.6
SLC48A1-201ENST00000442218 ZNF695Q8IW36 515 aa11.31□□□□□ -0.6
SLC48A1-201ENST00000442218 UBAC2Q8NBM4 344 aa11.31□□□□□ -0.6
SLC48A1-201ENST00000442218 CPEB3Q8NE35 698 aaKnown RBP11.31□□□□□ -0.6
SLC48A1-201ENST00000442218 LILRB1Q8NHL6 650 aaPredicted RBP11.31□□□□□ -0.6
SLC48A1-201ENST00000442218 ARRDC1-AS1Q9H2J1 176 aa11.31□□□□□ -0.6
SLC48A1-201ENST00000442218 GSN-AS1Q9NRJ2 163 aa11.31□□□□□ -0.6
SLC48A1-201ENST00000442218 CCL28Q9NRJ3 127 aa11.31□□□□□ -0.6
SLC48A1-201ENST00000442218 GLRX2Q9NS18 164 aa11.31□□□□□ -0.6
SLC48A1-201ENST00000442218 KPTNQ9Y664 436 aa11.31□□□□□ -0.6
SLC48A1-201ENST00000442218 CHD3Q12873 2000 aaKnown RBP11.31□□□□□ -0.6
SLC48A1-201ENST00000442218 COL5A1P20908 1838 aaPredicted RBP11.31□□□□□ -0.6
SLC48A1-201ENST00000442218 CLN5O75503 358 aa11.3□□□□□ -0.6
SLC48A1-201ENST00000442218 PPYP01298 95 aa11.3□□□□□ -0.6
SLC48A1-201ENST00000442218 IGLV3-1P01715 115 aa11.3□□□□□ -0.6
SLC48A1-201ENST00000442218 GLP1RP43220 463 aa11.3□□□□□ -0.6
SLC48A1-201ENST00000442218 FGF8P55075 233 aaPredicted RBP11.3□□□□□ -0.6
SLC48A1-201ENST00000442218 FAM3AP98173 230 aa11.3□□□□□ -0.6
SLC48A1-201ENST00000442218 MALLQ13021 153 aa11.3□□□□□ -0.6
SLC48A1-201ENST00000442218 C9orf152Q5JTZ5 239 aa11.3□□□□□ -0.6
SLC48A1-201ENST00000442218 SOHLH1Q5JUK2 328 aa11.3□□□□□ -0.6
SLC48A1-201ENST00000442218 SUMF2Q8NBJ7 301 aa11.3□□□□□ -0.6
SLC48A1-201ENST00000442218 TMEM54Q969K7 222 aa11.3□□□□□ -0.6
SLC48A1-201ENST00000442218 SCRT1Q9BWW7 348 aa11.3□□□□□ -0.6
SLC48A1-201ENST00000442218 ZNF286AQ9HBT8 521 aa11.3□□□□□ -0.6
SLC48A1-201ENST00000442218 STARD10Q9Y365 291 aa11.3□□□□□ -0.6
SLC48A1-201ENST00000442218 IGHV1-45A0A0A0MS14 117 aa11.3□□□□□ -0.6
SLC48A1-201ENST00000442218 C3orf85A0A1B0GTC6 90 aa11.3□□□□□ -0.6
SLC48A1-201ENST00000442218 ARGFXA6NJG6 315 aa11.3□□□□□ -0.6
SLC48A1-201ENST00000442218 WRBO00258 174 aa11.3□□□□□ -0.6
SLC48A1-201ENST00000442218 ETV2O00321 342 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms