RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 OR1N1Q8NGS0 311 aa17.61■□□□□ 0.41
SHOX2-203ENST00000441443 PI4KAP42356 2102 aa17.6■□□□□ 0.41
SHOX2-203ENST00000441443 VSTM2BA6NLU5 285 aa17.6■□□□□ 0.41
SHOX2-203ENST00000441443 ZNF814B7Z6K7 855 aa17.6■□□□□ 0.41
SHOX2-203ENST00000441443 HSPA12AO43301 675 aa17.6■□□□□ 0.41
SHOX2-203ENST00000441443 PDCD1Q15116 288 aa17.6■□□□□ 0.41
SHOX2-203ENST00000441443 CMTM1Q8IZ96 169 aa17.6■□□□□ 0.41
SHOX2-203ENST00000441443 TMEM252Q8N6L7 170 aa17.6■□□□□ 0.41
SHOX2-203ENST00000441443 GPHA2Q96T91 129 aa17.6■□□□□ 0.41
SHOX2-203ENST00000441443 ZNF160Q9HCG1 818 aa17.6■□□□□ 0.41
SHOX2-203ENST00000441443 WDFY3Q8IZQ1 3526 aa17.6■□□□□ 0.41
SHOX2-203ENST00000441443 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.6■□□□□ 0.41
SHOX2-203ENST00000441443 MKRN2OSH3BPM6 223 aa17.6■□□□□ 0.41
SHOX2-203ENST00000441443 TNFSF12O43508 249 aa17.6■□□□□ 0.41
SHOX2-203ENST00000441443 PAX1P15863 534 aa17.6■□□□□ 0.41
SHOX2-203ENST00000441443 NKX2-1P43699 371 aaPredicted RBP17.6■□□□□ 0.41
SHOX2-203ENST00000441443 CXorf66Q5JRM2 361 aaPredicted RBP17.6■□□□□ 0.41
SHOX2-203ENST00000441443 PHF7Q9BWX1 381 aaPredicted RBP17.6■□□□□ 0.41
SHOX2-203ENST00000441443 GPR173Q9NS66 373 aa17.6■□□□□ 0.41
SHOX2-203ENST00000441443 ALKBH4Q9NXW9 302 aa17.6■□□□□ 0.41
SHOX2-203ENST00000441443 TP53TG5Q9Y2B4 290 aa17.6■□□□□ 0.41
SHOX2-203ENST00000441443 SDK2Q58EX2 2172 aa17.59■□□□□ 0.41
SHOX2-203ENST00000441443 PITX3O75364 302 aa17.59■□□□□ 0.41
SHOX2-203ENST00000441443 CFHR1Q03591 330 aa17.59■□□□□ 0.41
SHOX2-203ENST00000441443 JOSD1Q15040 202 aaPredicted RBP17.59■□□□□ 0.41
SHOX2-203ENST00000441443 RTL6Q6ICC9 239 aa17.59■□□□□ 0.41
SHOX2-203ENST00000441443 D2HGDHQ8N465 521 aa17.59■□□□□ 0.41
SHOX2-203ENST00000441443 ANKUB1A6NFN9 424 aa17.59■□□□□ 0.41
SHOX2-203ENST00000441443 ZFP92A6NM28 416 aa17.59■□□□□ 0.41
SHOX2-203ENST00000441443 ST8SIA1Q92185 356 aa17.59■□□□□ 0.41
SHOX2-203ENST00000441443 GPR87Q9BY21 358 aa17.59■□□□□ 0.41
SHOX2-203ENST00000441443 CACNA1EQ15878 2313 aa17.59■□□□□ 0.41
SHOX2-203ENST00000441443 C10orf142B7Z368 130 aa17.58■□□□□ 0.41
SHOX2-203ENST00000441443 CLDN34H7C241 214 aa17.58■□□□□ 0.41
SHOX2-203ENST00000441443 CA11O75493 328 aa17.58■□□□□ 0.41
SHOX2-203ENST00000441443 AMBPP02760 352 aa17.58■□□□□ 0.41
SHOX2-203ENST00000441443 FGF7P21781 194 aa17.58■□□□□ 0.41
SHOX2-203ENST00000441443 FBLP22087 321 aaKnown RBP17.58■□□□□ 0.41
SHOX2-203ENST00000441443 G0S2P27469 103 aa17.58■□□□□ 0.41
SHOX2-203ENST00000441443 ZNF133P52736 654 aaPredicted RBP17.58■□□□□ 0.41
SHOX2-203ENST00000441443 MTCP1P56278 107 aa17.58■□□□□ 0.41
SHOX2-203ENST00000441443 MPV17LQ2QL34 196 aa17.58■□□□□ 0.41
SHOX2-203ENST00000441443 OR8G5Q8NG78 346 aa17.58■□□□□ 0.41
SHOX2-203ENST00000441443 SYT3Q9BQG1 590 aa17.58■□□□□ 0.41
SHOX2-203ENST00000441443 PITPNC1Q9UKF7 332 aa17.58■□□□□ 0.41
SHOX2-203ENST00000441443 URB1O60287 2271 aaKnown RBP17.58■□□□□ 0.41
SHOX2-203ENST00000441443 EREGO14944 169 aa17.58■□□□□ 0.4
SHOX2-203ENST00000441443 MMP9P14780 707 aa17.58■□□□□ 0.4
SHOX2-203ENST00000441443 CABLES2Q9BTV7 478 aa17.58■□□□□ 0.4
SHOX2-203ENST00000441443 PLEKHF2Q9H8W4 249 aa17.58■□□□□ 0.4
SHOX2-203ENST00000441443 FAM86C1Q9NVL1 165 aa17.58■□□□□ 0.4
SHOX2-203ENST00000441443 DHRS3O75911 302 aa17.58■□□□□ 0.4
SHOX2-203ENST00000441443 SP5Q6BEB4 398 aaPredicted RBP17.58■□□□□ 0.4
SHOX2-203ENST00000441443 SLC25A47Q6Q0C1 308 aa17.58■□□□□ 0.4
SHOX2-203ENST00000441443 C11orf1Q9H5F2 150 aa17.58■□□□□ 0.4
SHOX2-203ENST00000441443 IGHV1OR21-1A0A087WYE8 117 aa17.57■□□□□ 0.4
SHOX2-203ENST00000441443 VAMP2P63027 116 aa17.57■□□□□ 0.4
SHOX2-203ENST00000441443 LBHQ53QV2 105 aaPredicted RBP17.57■□□□□ 0.4
SHOX2-203ENST00000441443 FAM90A2PQ658T7 463 aa17.57■□□□□ 0.4
SHOX2-203ENST00000441443 ZNF441Q8N8Z8 693 aa17.57■□□□□ 0.4
SHOX2-203ENST00000441443 OR4X1Q8NH49 305 aa17.57■□□□□ 0.4
SHOX2-203ENST00000441443 MRPL37Q9BZE1 423 aaKnown RBP17.57■□□□□ 0.4
SHOX2-203ENST00000441443 OR14J1Q9UGF5 321 aa17.57■□□□□ 0.4
SHOX2-203ENST00000441443 TCFL5Q9UL49 500 aa17.57■□□□□ 0.4
SHOX2-203ENST00000441443 PIAS2O75928 621 aa17.57■□□□□ 0.4
SHOX2-203ENST00000441443 TMEM50AO95807 157 aa17.57■□□□□ 0.4
SHOX2-203ENST00000441443 FOXO1Q12778 655 aa17.57■□□□□ 0.4
SHOX2-203ENST00000441443 ZNF154Q13106 437 aa17.57■□□□□ 0.4
SHOX2-203ENST00000441443 ODF3L1Q8IXM7 274 aa17.57■□□□□ 0.4
SHOX2-203ENST00000441443 NDUFAF3Q9BU61 184 aa17.57■□□□□ 0.4
SHOX2-203ENST00000441443 FGF21Q9NSA1 209 aa17.57■□□□□ 0.4
SHOX2-203ENST00000441443 FER1L5A0AVI2 2057 aa17.56■□□□□ 0.4
SHOX2-203ENST00000441443 TRAF3IP2O43734 574 aaPredicted RBP17.56■□□□□ 0.4
SHOX2-203ENST00000441443 AADACP22760 399 aa17.56■□□□□ 0.4
SHOX2-203ENST00000441443 NUTF2P61970 127 aaKnown RBP17.56■□□□□ 0.4
SHOX2-203ENST00000441443 GRB2P62993 217 aaKnown RBP17.56■□□□□ 0.4
SHOX2-203ENST00000441443 C17orf67Q0P5P2 114 aa17.56■□□□□ 0.4
SHOX2-203ENST00000441443 UBE2ZQ9H832 354 aaPredicted RBP17.56■□□□□ 0.4
SHOX2-203ENST00000441443 CD55P08174 381 aa17.56■□□□□ 0.4
SHOX2-203ENST00000441443 NXPH1P58417 271 aa17.56■□□□□ 0.4
SHOX2-203ENST00000441443 TLE4Q04727 773 aa17.56■□□□□ 0.4
SHOX2-203ENST00000441443 PIGYQ3MUY2 71 aa17.56■□□□□ 0.4
SHOX2-203ENST00000441443 TMEM183AQ8IXX5 376 aa17.56■□□□□ 0.4
SHOX2-203ENST00000441443 RBMXL1Q96E39 390 aaKnown RBP17.56■□□□□ 0.4
SHOX2-203ENST00000441443 LYRM2Q9NU23 88 aaPredicted RBP17.56■□□□□ 0.4
SHOX2-203ENST00000441443 C3orf85A0A1B0GTC6 90 aa17.56■□□□□ 0.4
SHOX2-203ENST00000441443 A0A1B0GU03 582 aa17.56■□□□□ 0.4
SHOX2-203ENST00000441443 FOSL2P15408 326 aa17.56■□□□□ 0.4
SHOX2-203ENST00000441443 PNLIPP16233 465 aa17.56■□□□□ 0.4
SHOX2-203ENST00000441443 WDR25Q64LD2 544 aaPredicted RBP17.56■□□□□ 0.4
SHOX2-203ENST00000441443 RCC1LQ96I51 464 aaKnown RBP17.56■□□□□ 0.4
SHOX2-203ENST00000441443 TMEM68Q96MH6 324 aa17.56■□□□□ 0.4
SHOX2-203ENST00000441443 DDA1Q9BW61 102 aa17.56■□□□□ 0.4
SHOX2-203ENST00000441443 LOC102723971A0A1B0GUV8 181 aa17.55■□□□□ 0.4
SHOX2-203ENST00000441443 A0A1W2PNV4 684 aa17.55■□□□□ 0.4
SHOX2-203ENST00000441443 IL18BPO95998 194 aa17.55■□□□□ 0.4
SHOX2-203ENST00000441443 B4DEV8 164 aa17.55■□□□□ 0.4
SHOX2-203ENST00000441443 ZNF732B4DXR9 585 aa17.55■□□□□ 0.4
SHOX2-203ENST00000441443 DVL1O14640 695 aa17.55■□□□□ 0.4
SHOX2-203ENST00000441443 ADAM20O43506 726 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms