RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 PHF1O43189 567 aaPredicted RBP14.14□□□□□ -0.15
CLCNKA-203ENST00000439316 GLAP06280 429 aa14.14□□□□□ -0.15
CLCNKA-203ENST00000439316 AADACP22760 399 aa14.14□□□□□ -0.15
CLCNKA-203ENST00000439316 ZNF92Q03936 586 aa14.14□□□□□ -0.15
CLCNKA-203ENST00000439316 DAZAP2Q15038 168 aaPredicted RBP14.14□□□□□ -0.15
CLCNKA-203ENST00000439316 ABLIM2Q6H8Q1 611 aa14.14□□□□□ -0.15
CLCNKA-203ENST00000439316 AAED1Q7RTV5 226 aa14.14□□□□□ -0.15
CLCNKA-203ENST00000439316 NAXEQ8NCW5 288 aa14.14□□□□□ -0.15
CLCNKA-203ENST00000439316 FOXB1Q99853 325 aa14.14□□□□□ -0.15
CLCNKA-203ENST00000439316 SH3BGRL3Q9H299 93 aa14.14□□□□□ -0.15
CLCNKA-203ENST00000439316 C11orf1Q9H5F2 150 aa14.14□□□□□ -0.15
CLCNKA-203ENST00000439316 RPS10P5Q9NQ39 176 aa14.14□□□□□ -0.15
CLCNKA-203ENST00000439316 ASPMQ8IZT6 3477 aa14.14□□□□□ -0.15
CLCNKA-203ENST00000439316 TNFSF15O95150 251 aa14.14□□□□□ -0.15
CLCNKA-203ENST00000439316 GLI4P10075 376 aa14.14□□□□□ -0.15
CLCNKA-203ENST00000439316 AKR1C3P42330 323 aa14.14□□□□□ -0.15
CLCNKA-203ENST00000439316 FHITP49789 147 aa14.14□□□□□ -0.15
CLCNKA-203ENST00000439316 CARD18P57730 90 aa14.14□□□□□ -0.15
CLCNKA-203ENST00000439316 HERV-K104P61576 105 aa14.14□□□□□ -0.15
CLCNKA-203ENST00000439316 RNF212Q495C1 297 aa14.14□□□□□ -0.15
CLCNKA-203ENST00000439316 AKIRIN2Q53H80 203 aa14.14□□□□□ -0.15
CLCNKA-203ENST00000439316 PLCXD3Q63HM9 321 aa14.14□□□□□ -0.15
CLCNKA-203ENST00000439316 YRDCQ86U90 279 aaKnown RBP14.14□□□□□ -0.15
CLCNKA-203ENST00000439316 SLC35G3Q8N808 338 aa14.14□□□□□ -0.15
CLCNKA-203ENST00000439316 TECTBQ96PL2 329 aa14.14□□□□□ -0.15
CLCNKA-203ENST00000439316 TP53RKQ96S44 253 aa14.14□□□□□ -0.15
CLCNKA-203ENST00000439316 TUBA4BQ9H853 241 aa14.14□□□□□ -0.15
CLCNKA-203ENST00000439316 ZNF816-ZNF321PA0A0X1KG74 233 aa14.13□□□□□ -0.15
CLCNKA-203ENST00000439316 C7orf77A4D0Y5 90 aa14.13□□□□□ -0.15
CLCNKA-203ENST00000439316 OTX2P32243 289 aa14.13□□□□□ -0.15
CLCNKA-203ENST00000439316 RIPPLY2Q5TAB7 128 aa14.13□□□□□ -0.15
CLCNKA-203ENST00000439316 FGFBP3Q8TAT2 258 aa14.13□□□□□ -0.15
CLCNKA-203ENST00000439316 BOD1Q96IK1 185 aa14.13□□□□□ -0.15
CLCNKA-203ENST00000439316 SGCZQ96LD1 299 aa14.13□□□□□ -0.15
CLCNKA-203ENST00000439316 C1orf196B1AJZ1 125 aa14.13□□□□□ -0.15
CLCNKA-203ENST00000439316 C1QL1O75973 258 aa14.13□□□□□ -0.15
CLCNKA-203ENST00000439316 CDS2O95674 445 aa14.13□□□□□ -0.15
CLCNKA-203ENST00000439316 PPYP01298 95 aa14.13□□□□□ -0.15
CLCNKA-203ENST00000439316 IGHEP01854 428 aa14.13□□□□□ -0.15
CLCNKA-203ENST00000439316 MT-ND4LP03901 98 aa14.13□□□□□ -0.15
CLCNKA-203ENST00000439316 FUT3P21217 361 aa14.13□□□□□ -0.15
CLCNKA-203ENST00000439316 PCBD1P61457 104 aa14.13□□□□□ -0.15
CLCNKA-203ENST00000439316 SRPXP78539 464 aa14.13□□□□□ -0.15
CLCNKA-203ENST00000439316 S100A12P80511 92 aa14.13□□□□□ -0.15
CLCNKA-203ENST00000439316 NHLH2Q02577 135 aa14.13□□□□□ -0.15
CLCNKA-203ENST00000439316 CEACAM16Q2WEN9 425 aa14.13□□□□□ -0.15
CLCNKA-203ENST00000439316 PPP1R32Q7Z5V6 425 aa14.13□□□□□ -0.15
CLCNKA-203ENST00000439316 FAM185AQ8N0U4 392 aa14.13□□□□□ -0.15
CLCNKA-203ENST00000439316 OR14L1PQ8NHC6 308 aa14.13□□□□□ -0.15
CLCNKA-203ENST00000439316 POM121Q96HA1 1249 aa14.13□□□□□ -0.15
CLCNKA-203ENST00000439316 ADGRG7Q96K78 797 aa14.13□□□□□ -0.15
CLCNKA-203ENST00000439316 IFT22Q9H7X7 185 aa14.13□□□□□ -0.15
CLCNKA-203ENST00000439316 SPACA1Q9HBV2 294 aa14.13□□□□□ -0.15
CLCNKA-203ENST00000439316 PLSCR2Q9NRY7 297 aa14.13□□□□□ -0.15
CLCNKA-203ENST00000439316 DOCK10Q96BY6 2186 aa14.12□□□□□ -0.15
CLCNKA-203ENST00000439316 K7N7A8 449 aa14.12□□□□□ -0.15
CLCNKA-203ENST00000439316 CXCL13O43927 109 aa14.12□□□□□ -0.15
CLCNKA-203ENST00000439316 EIF3GO75821 320 aaKnown RBP eCLIP14.12□□□□□ -0.15
CLCNKA-203ENST00000439316 EDN3P14138 238 aa14.12□□□□□ -0.15
CLCNKA-203ENST00000439316 HOXB1P14653 301 aaPredicted RBP14.12□□□□□ -0.15
CLCNKA-203ENST00000439316 B2MP61769 119 aa14.12□□□□□ -0.15
CLCNKA-203ENST00000439316 EWSR1Q01844 656 aaKnown RBP eCLIP14.12□□□□□ -0.15
CLCNKA-203ENST00000439316 HSD17B11Q8NBQ5 300 aa14.12□□□□□ -0.15
CLCNKA-203ENST00000439316 SPSB4Q96A44 273 aa14.12□□□□□ -0.15
CLCNKA-203ENST00000439316 USB1Q9BQ65 265 aaKnown RBP14.12□□□□□ -0.15
CLCNKA-203ENST00000439316 EIF5A2Q9GZV4 153 aaKnown RBP14.12□□□□□ -0.15
CLCNKA-203ENST00000439316 GPR35Q9HC97 309 aa14.12□□□□□ -0.15
CLCNKA-203ENST00000439316 C3orf85A0A1B0GTC6 90 aa14.11□□□□□ -0.15
CLCNKA-203ENST00000439316 A0A1B0GW64 132 aa14.11□□□□□ -0.15
CLCNKA-203ENST00000439316 TRDCB7Z8K6 153 aa14.11□□□□□ -0.15
CLCNKA-203ENST00000439316 MPPED1O15442 326 aa14.11□□□□□ -0.15
CLCNKA-203ENST00000439316 PRH1P02810 166 aa14.11□□□□□ -0.15
CLCNKA-203ENST00000439316 SNRNP70P08621 437 aaKnown RBP14.11□□□□□ -0.15
CLCNKA-203ENST00000439316 ZNF44P15621 663 aa14.11□□□□□ -0.15
CLCNKA-203ENST00000439316 AGAP20933 346 aa14.11□□□□□ -0.15
CLCNKA-203ENST00000439316 GNMTQ14749 295 aa14.11□□□□□ -0.15
CLCNKA-203ENST00000439316 PDCD1Q15116 288 aa14.11□□□□□ -0.15
CLCNKA-203ENST00000439316 MEX3BQ6ZN04 569 aaKnown RBP14.11□□□□□ -0.15
CLCNKA-203ENST00000439316 Q6ZS49 121 aa14.11□□□□□ -0.15
CLCNKA-203ENST00000439316 CALHM1Q8IU99 346 aa14.11□□□□□ -0.15
CLCNKA-203ENST00000439316 LFNGQ8NES3 379 aa14.11□□□□□ -0.15
CLCNKA-203ENST00000439316 Q8NFD4 153 aa14.11□□□□□ -0.15
CLCNKA-203ENST00000439316 OR2V1Q8NHB1 315 aa14.11□□□□□ -0.15
CLCNKA-203ENST00000439316 PIGCQ92535 297 aa14.11□□□□□ -0.15
CLCNKA-203ENST00000439316 ZNF442Q9H7R0 627 aa14.11□□□□□ -0.15
CLCNKA-203ENST00000439316 NCKAP5O14513 1909 aa14.11□□□□□ -0.15
CLCNKA-203ENST00000439316 C5orf52A6NGY3 159 aa14.11□□□□□ -0.15
CLCNKA-203ENST00000439316 LRRC3CA6NJW4 275 aa14.11□□□□□ -0.15
CLCNKA-203ENST00000439316 P04436 131 aa14.11□□□□□ -0.15
CLCNKA-203ENST00000439316 ACAA1P09110 424 aaPredicted RBP14.11□□□□□ -0.15
CLCNKA-203ENST00000439316 MMP7P09237 267 aaPredicted RBP14.11□□□□□ -0.15
CLCNKA-203ENST00000439316 SNRPEP62304 92 aaKnown RBP14.11□□□□□ -0.15
CLCNKA-203ENST00000439316 SSPNQ14714 243 aa14.11□□□□□ -0.15
CLCNKA-203ENST00000439316 ZNF611Q8N823 705 aa14.11□□□□□ -0.15
CLCNKA-203ENST00000439316 OR10D3Q8NH80 312 aa14.11□□□□□ -0.15
CLCNKA-203ENST00000439316 SLC39A7Q92504 469 aa14.11□□□□□ -0.15
CLCNKA-203ENST00000439316 IP6K3Q96PC2 410 aa14.11□□□□□ -0.15
CLCNKA-203ENST00000439316 PBDC1Q9BVG4 233 aa14.11□□□□□ -0.15
CLCNKA-203ENST00000439316 C1QTNF5Q9BXJ0 243 aa14.11□□□□□ -0.15
CLCNKA-203ENST00000439316 TMEM222Q9H0R3 208 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms