RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 PCED1AQ9H1Q7 454 aa11.75□□□□□ -0.53
PCNX3-202ENST00000439247 NECAP2Q9NVZ3 263 aa11.75□□□□□ -0.53
PCNX3-202ENST00000439247 DCAF16Q9NXF7 216 aa11.75□□□□□ -0.53
PCNX3-202ENST00000439247 PISDQ9UG56 409 aa11.75□□□□□ -0.53
PCNX3-202ENST00000439247 SDK2Q58EX2 2172 aa11.75□□□□□ -0.53
PCNX3-202ENST00000439247 H3BMH7 237 aa11.74□□□□□ -0.53
PCNX3-202ENST00000439247 FOLR1P15328 257 aa11.74□□□□□ -0.53
PCNX3-202ENST00000439247 GLIPR1P48060 266 aa11.74□□□□□ -0.53
PCNX3-202ENST00000439247 RPL23AP62750 156 aaKnown RBP11.74□□□□□ -0.53
PCNX3-202ENST00000439247 IL13RA2Q14627 380 aa11.74□□□□□ -0.53
PCNX3-202ENST00000439247 PPA1Q15181 289 aa11.74□□□□□ -0.53
PCNX3-202ENST00000439247 OR4D5Q8NGN0 318 aa11.74□□□□□ -0.53
PCNX3-202ENST00000439247 OR14L1PQ8NHC6 308 aa11.74□□□□□ -0.53
PCNX3-202ENST00000439247 ST8SIA1Q92185 356 aa11.74□□□□□ -0.53
PCNX3-202ENST00000439247 NAT6Q93015 286 aa11.74□□□□□ -0.53
PCNX3-202ENST00000439247 FAM210BQ96KR6 192 aa11.74□□□□□ -0.53
PCNX3-202ENST00000439247 HIST1H2BLQ99880 126 aa11.74□□□□□ -0.53
PCNX3-202ENST00000439247 EML6Q6ZMW3 1958 aa11.74□□□□□ -0.53
PCNX3-202ENST00000439247 IGHV3-15A0A0B4J1V0 119 aa11.74□□□□□ -0.53
PCNX3-202ENST00000439247 RPL36A-HNRNPH2H7BZ11 118 aa11.74□□□□□ -0.53
PCNX3-202ENST00000439247 APLNRP35414 380 aa11.74□□□□□ -0.53
PCNX3-202ENST00000439247 BLKP51451 505 aa11.74□□□□□ -0.53
PCNX3-202ENST00000439247 C17orf67Q0P5P2 114 aa11.74□□□□□ -0.53
PCNX3-202ENST00000439247 SLC16A14Q7RTX9 510 aa11.74□□□□□ -0.53
PCNX3-202ENST00000439247 SLC25A31Q9H0C2 315 aa11.74□□□□□ -0.53
PCNX3-202ENST00000439247 H3BP45 60 aa11.73□□□□□ -0.53
PCNX3-202ENST00000439247 DHRS3O75911 302 aa11.73□□□□□ -0.53
PCNX3-202ENST00000439247 CD55P08174 381 aa11.73□□□□□ -0.53
PCNX3-202ENST00000439247 AADACP22760 399 aa11.73□□□□□ -0.53
PCNX3-202ENST00000439247 PKIAP61925 76 aa11.73□□□□□ -0.53
PCNX3-202ENST00000439247 RAB11AP62491 216 aa11.73□□□□□ -0.53
PCNX3-202ENST00000439247 ZNF154Q13106 437 aa11.73□□□□□ -0.53
PCNX3-202ENST00000439247 USF2Q15853 346 aaPredicted RBP11.73□□□□□ -0.53
PCNX3-202ENST00000439247 CLEC12BQ2HXU8 276 aa11.73□□□□□ -0.53
PCNX3-202ENST00000439247 LYSMD4Q5XG99 296 aa11.73□□□□□ -0.53
PCNX3-202ENST00000439247 PMS2CLQ68D20 193 aa11.73□□□□□ -0.53
PCNX3-202ENST00000439247 FAM180AQ6UWF9 173 aa11.73□□□□□ -0.53
PCNX3-202ENST00000439247 DPPA2Q7Z7J5 298 aa11.73□□□□□ -0.53
PCNX3-202ENST00000439247 TGIF2LXQ8IUE1 241 aa11.73□□□□□ -0.53
PCNX3-202ENST00000439247 GNG13Q9P2W3 67 aa11.73□□□□□ -0.53
PCNX3-202ENST00000439247 A0A1B0GW64 132 aa11.73□□□□□ -0.53
PCNX3-202ENST00000439247 HOXA6P31267 233 aa11.73□□□□□ -0.53
PCNX3-202ENST00000439247 CLDN17P56750 224 aa11.73□□□□□ -0.53
PCNX3-202ENST00000439247 TAS2R60P59551 318 aa11.73□□□□□ -0.53
PCNX3-202ENST00000439247 MPV17LQ2QL34 196 aa11.73□□□□□ -0.53
PCNX3-202ENST00000439247 WDR5BQ86VZ2 330 aa11.73□□□□□ -0.53
PCNX3-202ENST00000439247 LGI3Q8N145 548 aa11.73□□□□□ -0.53
PCNX3-202ENST00000439247 TMEM252Q8N6L7 170 aa11.73□□□□□ -0.53
PCNX3-202ENST00000439247 CLDND2Q8NHS1 167 aa11.73□□□□□ -0.53
PCNX3-202ENST00000439247 ATG101Q9BSB4 218 aa11.73□□□□□ -0.53
PCNX3-202ENST00000439247 KIAA1456Q9P272 454 aa11.73□□□□□ -0.53
PCNX3-202ENST00000439247 CHD3Q12873 2000 aaKnown RBP11.73□□□□□ -0.53
PCNX3-202ENST00000439247 ZFP92A6NM28 416 aa11.73□□□□□ -0.53
PCNX3-202ENST00000439247 PATE3B3GLJ2 98 aa11.73□□□□□ -0.53
PCNX3-202ENST00000439247 OR2J2O76002 312 aa11.73□□□□□ -0.53
PCNX3-202ENST00000439247 PTBP3O95758 552 aaKnown RBP11.73□□□□□ -0.53
PCNX3-202ENST00000439247 ALDH3B1P43353 468 aa11.73□□□□□ -0.53
PCNX3-202ENST00000439247 CASP6P55212 293 aa11.73□□□□□ -0.53
PCNX3-202ENST00000439247 OR1D5P58170 312 aa11.73□□□□□ -0.53
PCNX3-202ENST00000439247 FAM189A2Q15884 450 aa11.73□□□□□ -0.53
PCNX3-202ENST00000439247 KIAA2026Q5HYC2 2103 aa11.73□□□□□ -0.53
PCNX3-202ENST00000439247 AKR1C8PQ5T2L2 129 aa11.73□□□□□ -0.53
PCNX3-202ENST00000439247 ZNF837Q96EG3 531 aaPredicted RBP11.73□□□□□ -0.53
PCNX3-202ENST00000439247 TSTD3H0UI37 97 aa11.72□□□□□ -0.53
PCNX3-202ENST00000439247 ZNHIT1O43257 154 aa11.72□□□□□ -0.53
PCNX3-202ENST00000439247 FGF8P55075 233 aaPredicted RBP11.72□□□□□ -0.53
PCNX3-202ENST00000439247 SSX2Q16385 188 aa11.72□□□□□ -0.53
PCNX3-202ENST00000439247 FAM69BQ5VUD6 431 aa11.72□□□□□ -0.53
PCNX3-202ENST00000439247 WDR25Q64LD2 544 aaPredicted RBP11.72□□□□□ -0.53
PCNX3-202ENST00000439247 TMED3Q9Y3Q3 217 aa11.72□□□□□ -0.53
PCNX3-202ENST00000439247 ZNF407Q9C0G0 2248 aa11.72□□□□□ -0.53
PCNX3-202ENST00000439247 A0A087WWC5 75 aa11.72□□□□□ -0.53
PCNX3-202ENST00000439247 A0A1W2PNV4 684 aa11.72□□□□□ -0.53
PCNX3-202ENST00000439247 NPIPB13A6NJU9 1138 aa11.72□□□□□ -0.53
PCNX3-202ENST00000439247 NPIPB4C9JG80 1138 aa11.72□□□□□ -0.53
PCNX3-202ENST00000439247 IFNL4K9M1U5 179 aa11.72□□□□□ -0.53
PCNX3-202ENST00000439247 TERTO14746 1132 aaKnown RBP11.72□□□□□ -0.53
PCNX3-202ENST00000439247 HLA-HP01893 362 aa11.72□□□□□ -0.53
PCNX3-202ENST00000439247 ECI1P42126 302 aa11.72□□□□□ -0.53
PCNX3-202ENST00000439247 NKX2-1P43699 371 aaPredicted RBP11.72□□□□□ -0.53
PCNX3-202ENST00000439247 SHBQ15464 509 aa11.72□□□□□ -0.53
PCNX3-202ENST00000439247 SLC25A45Q8N413 288 aa11.72□□□□□ -0.53
PCNX3-202ENST00000439247 C11orf1Q9H5F2 150 aa11.72□□□□□ -0.53
PCNX3-202ENST00000439247 A0A087WZY1 265 aa11.71□□□□□ -0.53
PCNX3-202ENST00000439247 IGKV1-12A0A0C4DH73 117 aa11.71□□□□□ -0.53
PCNX3-202ENST00000439247 ADAM20O43506 726 aa11.71□□□□□ -0.53
PCNX3-202ENST00000439247 PIAS2O75928 621 aa11.71□□□□□ -0.53
PCNX3-202ENST00000439247 IGKV1D-12P01611 117 aa11.71□□□□□ -0.53
PCNX3-202ENST00000439247 CD200P41217 278 aa11.71□□□□□ -0.53
PCNX3-202ENST00000439247 ARL4DP49703 201 aa11.71□□□□□ -0.53
PCNX3-202ENST00000439247 ZNF41P51814 821 aaPredicted RBP11.71□□□□□ -0.53
PCNX3-202ENST00000439247 HLA-DRB3P79483 266 aa11.71□□□□□ -0.53
PCNX3-202ENST00000439247 NECAP1Q8NC96 275 aa11.71□□□□□ -0.53
PCNX3-202ENST00000439247 OR10G3Q8NGC4 313 aa11.71□□□□□ -0.53
PCNX3-202ENST00000439247 VSIRQ9H7M9 311 aa11.71□□□□□ -0.53
PCNX3-202ENST00000439247 BCO1Q9HAY6 547 aa11.71□□□□□ -0.53
PCNX3-202ENST00000439247 FASLGP48023 281 aa11.71□□□□□ -0.53
PCNX3-202ENST00000439247 HNF4GQ14541 408 aa11.71□□□□□ -0.53
PCNX3-202ENST00000439247 IZUMO4Q1ZYL8 232 aa11.71□□□□□ -0.53
PCNX3-202ENST00000439247 PLPPR5Q32ZL2 321 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms