RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 SMIM7Q9BQ49 75 aa13.85□□□□□ -0.19
DHFR-201ENST00000439211 SMDT1Q9H4I9 107 aa13.85□□□□□ -0.19
DHFR-201ENST00000439211 C5orf66Q9H5L9 145 aa13.85□□□□□ -0.19
DHFR-201ENST00000439211 KIF26AQ9ULI4 1882 aaPredicted RBP13.85□□□□□ -0.19
DHFR-201ENST00000439211 SRP19P09132 144 aaKnown RBP13.85□□□□□ -0.19
DHFR-201ENST00000439211 GALNSP34059 522 aa13.85□□□□□ -0.19
DHFR-201ENST00000439211 FAM57BQ71RH2 274 aa13.85□□□□□ -0.19
DHFR-201ENST00000439211 ZNF2Q9BSG1 426 aaPredicted RBP13.85□□□□□ -0.19
DHFR-201ENST00000439211 MRPS28Q9Y2Q9 187 aaKnown RBP13.85□□□□□ -0.19
DHFR-201ENST00000439211 A0A1W2PNR3 127 aa13.85□□□□□ -0.19
DHFR-201ENST00000439211 PLPP3O14495 311 aa13.85□□□□□ -0.19
DHFR-201ENST00000439211 CD33P20138 364 aa13.85□□□□□ -0.19
DHFR-201ENST00000439211 CDAP32320 146 aa13.85□□□□□ -0.19
DHFR-201ENST00000439211 GALR1P47211 349 aa13.85□□□□□ -0.19
DHFR-201ENST00000439211 ACOT6Q3I5F7 207 aaPredicted RBP13.85□□□□□ -0.19
DHFR-201ENST00000439211 NKAIN3Q8N8D7 197 aa13.85□□□□□ -0.19
DHFR-201ENST00000439211 POC1AQ8NBT0 407 aa13.85□□□□□ -0.19
DHFR-201ENST00000439211 OR51T1Q8NGJ9 327 aa13.85□□□□□ -0.19
DHFR-201ENST00000439211 ZNF524Q96C55 264 aa13.85□□□□□ -0.19
DHFR-201ENST00000439211 RPUSD4Q96CM3 377 aaKnown RBP13.85□□□□□ -0.19
DHFR-201ENST00000439211 NUP210Q8TEM1 1887 aaPredicted RBP13.85□□□□□ -0.19
DHFR-201ENST00000439211 ALG1L2C9J202 215 aa13.84□□□□□ -0.19
DHFR-201ENST00000439211 CDC14BO60729 498 aa13.84□□□□□ -0.19
DHFR-201ENST00000439211 C9orf40Q8IXQ3 194 aa13.84□□□□□ -0.19
DHFR-201ENST00000439211 REEP6Q96HR9 211 aa13.84□□□□□ -0.19
DHFR-201ENST00000439211 PGAM5Q96HS1 289 aa13.84□□□□□ -0.19
DHFR-201ENST00000439211 TMEM9BQ9NQ34 198 aa13.84□□□□□ -0.19
DHFR-201ENST00000439211 RHBDD3Q9Y3P4 386 aa13.84□□□□□ -0.19
DHFR-201ENST00000439211 ST8SIA3O43173 380 aa13.84□□□□□ -0.19
DHFR-201ENST00000439211 NUDT21O43809 227 aaKnown RBP13.84□□□□□ -0.19
DHFR-201ENST00000439211 OR2J2O76002 312 aa13.84□□□□□ -0.19
DHFR-201ENST00000439211 HPNP05981 417 aa13.84□□□□□ -0.19
DHFR-201ENST00000439211 ZNF43P17038 809 aa13.84□□□□□ -0.19
DHFR-201ENST00000439211 ZNF738Q8NE65 137 aa13.84□□□□□ -0.19
DHFR-201ENST00000439211 ZNF775Q96BV0 537 aaPredicted RBP13.84□□□□□ -0.19
DHFR-201ENST00000439211 MIEN1Q9BRT3 115 aa13.84□□□□□ -0.19
DHFR-201ENST00000439211 TMEM59Q9BXS4 323 aa13.84□□□□□ -0.19
DHFR-201ENST00000439211 KIAA1456Q9P272 454 aa13.84□□□□□ -0.19
DHFR-201ENST00000439211 FANCMQ8IYD8 2048 aa13.84□□□□□ -0.19
DHFR-201ENST00000439211 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.84□□□□□ -0.19
DHFR-201ENST00000439211 NSG1A0A0A6YYJ2 146 aa13.84□□□□□ -0.19
DHFR-201ENST00000439211 F6UZH7 168 aa13.84□□□□□ -0.19
DHFR-201ENST00000439211 KRTDAPP60985 99 aa13.84□□□□□ -0.19
DHFR-201ENST00000439211 HOGA1Q86XE5 327 aa13.84□□□□□ -0.19
DHFR-201ENST00000439211 C11orf40Q8WZ69 217 aa13.84□□□□□ -0.19
DHFR-201ENST00000439211 MRPL24Q96A35 216 aaKnown RBP13.84□□□□□ -0.19
DHFR-201ENST00000439211 SLC2A9Q9NRM0 540 aa13.84□□□□□ -0.19
DHFR-201ENST00000439211 PLA2G2EQ9NZK7 142 aa13.84□□□□□ -0.19
DHFR-201ENST00000439211 ZNF107Q9UII5 783 aaPredicted RBP13.84□□□□□ -0.19
DHFR-201ENST00000439211 RPL36A-HNRNPH2H7BZ11 118 aa13.84□□□□□ -0.19
DHFR-201ENST00000439211 HSD17B6O14756 317 aa13.84□□□□□ -0.19
DHFR-201ENST00000439211 PDGFBP01127 241 aaPredicted RBP13.84□□□□□ -0.19
DHFR-201ENST00000439211 RBX1P62877 108 aa13.84□□□□□ -0.19
DHFR-201ENST00000439211 MMDQ15546 238 aa13.84□□□□□ -0.19
DHFR-201ENST00000439211 CATSPERDQ86XM0 798 aa13.84□□□□□ -0.19
DHFR-201ENST00000439211 Q8NFD4 153 aa13.84□□□□□ -0.19
DHFR-201ENST00000439211 RNASEH2CQ8TDP1 164 aaKnown RBP13.84□□□□□ -0.19
DHFR-201ENST00000439211 PCGF1Q9BSM1 259 aa13.84□□□□□ -0.19
DHFR-201ENST00000439211 ABHD14AQ9BUJ0 271 aa13.84□□□□□ -0.19
DHFR-201ENST00000439211 VN1R1Q9GZP7 353 aa13.84□□□□□ -0.19
DHFR-201ENST00000439211 HSPB2A8KAH6 182 aa13.83□□□□□ -0.2
DHFR-201ENST00000439211 TLX3O43711 291 aaPredicted RBP13.83□□□□□ -0.2
DHFR-201ENST00000439211 HSPB2Q16082 182 aa13.83□□□□□ -0.2
DHFR-201ENST00000439211 Q7L0L9 218 aa13.83□□□□□ -0.2
DHFR-201ENST00000439211 FAM103A1Q9BTL3 118 aaKnown RBP13.83□□□□□ -0.2
DHFR-201ENST00000439211 PBOV1Q9GZY1 135 aa13.83□□□□□ -0.2
DHFR-201ENST00000439211 POLR3KQ9Y2Y1 108 aaPredicted RBP13.83□□□□□ -0.2
DHFR-201ENST00000439211 KNTC1P50748 2209 aa13.83□□□□□ -0.2
DHFR-201ENST00000439211 FPR2P25090 351 aa13.83□□□□□ -0.2
DHFR-201ENST00000439211 SUMO1P63165 101 aaKnown RBP13.83□□□□□ -0.2
DHFR-201ENST00000439211 PNRC1Q12796 327 aaPredicted RBP13.83□□□□□ -0.2
DHFR-201ENST00000439211 TESK1Q15569 626 aa13.83□□□□□ -0.2
DHFR-201ENST00000439211 PRAMEF20Q5VT98 475 aa13.83□□□□□ -0.2
DHFR-201ENST00000439211 OR1L3Q8NH93 324 aa13.83□□□□□ -0.2
DHFR-201ENST00000439211 FOXQ1Q9C009 403 aa13.83□□□□□ -0.2
DHFR-201ENST00000439211 SRD5A3Q9H8P0 318 aa13.83□□□□□ -0.2
DHFR-201ENST00000439211 GPR132Q9UNW8 380 aa13.83□□□□□ -0.2
DHFR-201ENST00000439211 LOC101059948A0A1B0GTJ6 334 aa13.83□□□□□ -0.2
DHFR-201ENST00000439211 CDKN1BP46527 198 aa13.83□□□□□ -0.2
DHFR-201ENST00000439211 SNU13P55769 128 aaKnown RBP13.83□□□□□ -0.2
DHFR-201ENST00000439211 C17orf67Q0P5P2 114 aa13.83□□□□□ -0.2
DHFR-201ENST00000439211 LGI3Q8N145 548 aa13.83□□□□□ -0.2
DHFR-201ENST00000439211 DTWD2Q8NBA8 298 aa13.83□□□□□ -0.2
DHFR-201ENST00000439211 EMG1Q92979 244 aaKnown RBP13.83□□□□□ -0.2
DHFR-201ENST00000439211 SYT3Q9BQG1 590 aa13.83□□□□□ -0.2
DHFR-201ENST00000439211 DEDDO75618 318 aa13.82□□□□□ -0.2
DHFR-201ENST00000439211 DDAH2O95865 285 aa13.82□□□□□ -0.2
DHFR-201ENST00000439211 CHRM2P08172 466 aa13.82□□□□□ -0.2
DHFR-201ENST00000439211 HINT1P49773 126 aaPredicted RBP13.82□□□□□ -0.2
DHFR-201ENST00000439211 DNM1P46Q6ZS02 220 aa13.82□□□□□ -0.2
DHFR-201ENST00000439211 TMEM156Q8N614 296 aa13.82□□□□□ -0.2
DHFR-201ENST00000439211 ACY3Q96HD9 319 aa13.82□□□□□ -0.2
DHFR-201ENST00000439211 MTCH2Q9Y6C9 303 aa13.82□□□□□ -0.2
DHFR-201ENST00000439211 CST7O76096 145 aa13.82□□□□□ -0.2
DHFR-201ENST00000439211 WISP1O95388 367 aa13.82□□□□□ -0.2
DHFR-201ENST00000439211 IFNA5P01569 189 aa13.82□□□□□ -0.2
DHFR-201ENST00000439211 ATP6V0CP27449 155 aa13.82□□□□□ -0.2
DHFR-201ENST00000439211 MAS1LP35410 378 aa13.82□□□□□ -0.2
DHFR-201ENST00000439211 FOXF1Q12946 379 aa13.82□□□□□ -0.2
DHFR-201ENST00000439211 BAGE3Q86Y29 109 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms