RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 PRDM14Q9GZV8 571 aa10.56□□□□□ -0.72
NEK1-201ENST00000439128 OR51I2Q9H344 312 aa10.56□□□□□ -0.72
NEK1-201ENST00000439128 AKIRIN1Q9H9L7 192 aaPredicted RBP10.56□□□□□ -0.72
NEK1-201ENST00000439128 GPR27Q9NS67 375 aa10.56□□□□□ -0.72
NEK1-201ENST00000439128 LSM2Q9Y333 95 aaKnown RBP10.56□□□□□ -0.72
NEK1-201ENST00000439128 BRWD1Q9NSI6 2320 aa10.56□□□□□ -0.72
NEK1-201ENST00000439128 TMEM229AB2RXF0 380 aa10.56□□□□□ -0.72
NEK1-201ENST00000439128 TRDCB7Z8K6 153 aa10.56□□□□□ -0.72
NEK1-201ENST00000439128 CRHP06850 196 aa10.56□□□□□ -0.72
NEK1-201ENST00000439128 NGFRP08138 427 aa10.56□□□□□ -0.72
NEK1-201ENST00000439128 CELA3AP09093 270 aa10.56□□□□□ -0.72
NEK1-201ENST00000439128 METTL15P1P0C7V9 234 aa10.56□□□□□ -0.72
NEK1-201ENST00000439128 DAOP14920 347 aa10.56□□□□□ -0.72
NEK1-201ENST00000439128 DCTDP32321 178 aa10.56□□□□□ -0.72
NEK1-201ENST00000439128 OR4D10Q8NGI6 311 aa10.56□□□□□ -0.72
NEK1-201ENST00000439128 TERB2Q8NHR7 220 aa10.56□□□□□ -0.72
NEK1-201ENST00000439128 OR4C12Q96R67 309 aa10.56□□□□□ -0.72
NEK1-201ENST00000439128 CEP290O15078 2479 aa10.56□□□□□ -0.72
NEK1-201ENST00000439128 OR13C7P0DN81 318 aa10.56□□□□□ -0.72
NEK1-201ENST00000439128 RPL12P30050 165 aaKnown RBP10.56□□□□□ -0.72
NEK1-201ENST00000439128 TEX30Q5JUR7 227 aa10.56□□□□□ -0.72
NEK1-201ENST00000439128 VWA1Q6PCB0 445 aa10.56□□□□□ -0.72
NEK1-201ENST00000439128 CCDC28AQ8IWP9 274 aa10.56□□□□□ -0.72
NEK1-201ENST00000439128 TPRX1Q8N7U7 411 aa10.56□□□□□ -0.72
NEK1-201ENST00000439128 OR1L4Q8NGR5 311 aa10.56□□□□□ -0.72
NEK1-201ENST00000439128 ABHD14AQ9BUJ0 271 aa10.56□□□□□ -0.72
NEK1-201ENST00000439128 SRXN1Q9BYN0 137 aa10.56□□□□□ -0.72
NEK1-201ENST00000439128 ZNF724A8MTY0 619 aa10.55□□□□□ -0.72
NEK1-201ENST00000439128 OR4E1P0C645 316 aa10.55□□□□□ -0.72
NEK1-201ENST00000439128 SOHLH1Q5JUK2 328 aa10.55□□□□□ -0.72
NEK1-201ENST00000439128 UNQ9370/PRO34162Q6UXP9 181 aa10.55□□□□□ -0.72
NEK1-201ENST00000439128 TMEM123Q8N131 208 aa10.55□□□□□ -0.72
NEK1-201ENST00000439128 DUSP18Q8NEJ0 188 aa10.55□□□□□ -0.72
NEK1-201ENST00000439128 C3orf85A0A1B0GTC6 90 aa10.55□□□□□ -0.72
NEK1-201ENST00000439128 GAPDHP04406 335 aaKnown RBP10.55□□□□□ -0.72
NEK1-201ENST00000439128 SLC25A5P05141 298 aaKnown RBP10.55□□□□□ -0.72
NEK1-201ENST00000439128 PTBP1P26599 531 aaKnown RBP eCLIP10.55□□□□□ -0.724e-7■■■■□ 20.3
NEK1-201ENST00000439128 HOXA6P31267 233 aa10.55□□□□□ -0.72
NEK1-201ENST00000439128 TNFSF10P50591 281 aa10.55□□□□□ -0.72
NEK1-201ENST00000439128 ZBTB44Q8NCP5 570 aa10.55□□□□□ -0.72
NEK1-201ENST00000439128 MRM2Q9UI43 246 aaKnown RBP10.55□□□□□ -0.72
NEK1-201ENST00000439128 CDKN1AP38936 164 aa10.55□□□□□ -0.72
NEK1-201ENST00000439128 LCN2P80188 198 aa10.55□□□□□ -0.72
NEK1-201ENST00000439128 TMEM229BQ8NBD8 167 aa10.55□□□□□ -0.72
NEK1-201ENST00000439128 YIPF5Q969M3 257 aa10.55□□□□□ -0.72
NEK1-201ENST00000439128 ATP5SQ99766 215 aa10.55□□□□□ -0.72
NEK1-201ENST00000439128 NIPSNAP3BQ9BS92 247 aa10.55□□□□□ -0.72
NEK1-201ENST00000439128 PATZ1Q9HBE1 687 aaKnown RBP10.55□□□□□ -0.72
NEK1-201ENST00000439128 ASCL3Q9NQ33 180 aa10.55□□□□□ -0.72
NEK1-201ENST00000439128 APC2O95996 2303 aa10.55□□□□□ -0.72
NEK1-201ENST00000439128 TRPM7Q96QT4 1865 aa10.55□□□□□ -0.72
NEK1-201ENST00000439128 IGHV3-21A0A0B4J1V1 117 aa10.55□□□□□ -0.72
NEK1-201ENST00000439128 SPP1P10451 314 aa10.55□□□□□ -0.72
NEK1-201ENST00000439128 Q8WTZ3 238 aa10.55□□□□□ -0.72
NEK1-201ENST00000439128 MITD1Q8WV92 249 aa10.55□□□□□ -0.72
NEK1-201ENST00000439128 SCARF2Q96GP6 870 aaPredicted RBP10.55□□□□□ -0.72
NEK1-201ENST00000439128 C2orf50Q96LR7 162 aa10.55□□□□□ -0.72
NEK1-201ENST00000439128 WDR13Q9H1Z4 485 aa10.55□□□□□ -0.72
NEK1-201ENST00000439128 FLVCR2Q9UPI3 526 aa10.55□□□□□ -0.72
NEK1-201ENST00000439128 ZNFX1Q9P2E3 1918 aaKnown RBP10.54□□□□□ -0.72
NEK1-201ENST00000439128 SMLR1H3BR10 107 aa10.54□□□□□ -0.72
NEK1-201ENST00000439128 CST7O76096 145 aa10.54□□□□□ -0.72
NEK1-201ENST00000439128 RRASP10301 218 aa10.54□□□□□ -0.72
NEK1-201ENST00000439128 ID1P41134 155 aa10.54□□□□□ -0.72
NEK1-201ENST00000439128 OR2B8PP59922 312 aa10.54□□□□□ -0.72
NEK1-201ENST00000439128 BAGE3Q86Y29 109 aa10.54□□□□□ -0.72
NEK1-201ENST00000439128 BAGE2Q86Y30 109 aa10.54□□□□□ -0.72
NEK1-201ENST00000439128 CDH26Q8IXH8 852 aa10.54□□□□□ -0.72
NEK1-201ENST00000439128 ZNRF4Q8WWF5 429 aa10.54□□□□□ -0.72
NEK1-201ENST00000439128 C10orf35Q96D05 121 aa10.54□□□□□ -0.72
NEK1-201ENST00000439128 POM121Q96HA1 1249 aa10.54□□□□□ -0.72
NEK1-201ENST00000439128 SLA2Q9H6Q3 261 aa10.54□□□□□ -0.72
NEK1-201ENST00000439128 TMEFF2Q9UIK5 374 aaPredicted RBP10.54□□□□□ -0.72
NEK1-201ENST00000439128 NDUFA2O43678 99 aa10.54□□□□□ -0.72
NEK1-201ENST00000439128 RPS10P46783 165 aaKnown RBP10.54□□□□□ -0.72
NEK1-201ENST00000439128 HAGHQ16775 308 aa10.54□□□□□ -0.72
NEK1-201ENST00000439128 FAM27BQ5VT28 67 aa10.54□□□□□ -0.72
NEK1-201ENST00000439128 ETV3LQ6ZN32 361 aa10.54□□□□□ -0.72
NEK1-201ENST00000439128 ZNF826PQ6ZT77 177 aa10.54□□□□□ -0.72
NEK1-201ENST00000439128 LYG2Q86SG7 212 aa10.54□□□□□ -0.72
NEK1-201ENST00000439128 KCNRGQ8N5I3 272 aa10.54□□□□□ -0.72
NEK1-201ENST00000439128 RBM14Q96PK6 669 aaKnown RBP10.54□□□□□ -0.72
NEK1-201ENST00000439128 COL25A1Q9BXS0 654 aaPredicted RBP10.54□□□□□ -0.72
NEK1-201ENST00000439128 KLK11Q9UBX7 282 aa10.54□□□□□ -0.72
NEK1-201ENST00000439128 AUP1Q9Y679 476 aa10.54□□□□□ -0.72
NEK1-201ENST00000439128 CENPVL1A0A0U1RR11 272 aa10.54□□□□□ -0.72
NEK1-201ENST00000439128 TO15178 435 aa10.54□□□□□ -0.72
NEK1-201ENST00000439128 MMP7P09237 267 aaPredicted RBP10.54□□□□□ -0.72
NEK1-201ENST00000439128 DRAXINQ8NBI3 349 aaPredicted RBP10.54□□□□□ -0.72
NEK1-201ENST00000439128 SLC52A3Q9NQ40 469 aa10.54□□□□□ -0.72
NEK1-201ENST00000439128 CACNG5Q9UF02 275 aa10.54□□□□□ -0.72
NEK1-201ENST00000439128 DOCK3Q8IZD9 2030 aa10.54□□□□□ -0.72
NEK1-201ENST00000439128 K7N7A8 449 aa10.54□□□□□ -0.72
NEK1-201ENST00000439128 SNAPINO95295 136 aa10.54□□□□□ -0.72
NEK1-201ENST00000439128 OR4C16Q8NGL9 310 aa10.54□□□□□ -0.72
NEK1-201ENST00000439128 LIMS3P0CW19 117 aa10.53□□□□□ -0.72
NEK1-201ENST00000439128 LIMS4P0CW20 117 aa10.53□□□□□ -0.72
NEK1-201ENST00000439128 HOXB1P14653 301 aaPredicted RBP10.53□□□□□ -0.72
NEK1-201ENST00000439128 PIGYQ3MUY2 71 aa10.53□□□□□ -0.72
NEK1-201ENST00000439128 ZNF787Q6DD87 383 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms