RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 MEX3AA1L020 520 aaKnown RBP13.65□□□□□ -0.22
NEDD4-202ENST00000435532 RFPL4AA6NLU0 287 aa13.65□□□□□ -0.22
NEDD4-202ENST00000435532 RFPL4AL1F8VTS6 287 aa13.65□□□□□ -0.22
NEDD4-202ENST00000435532 NAAAQ02083 359 aa13.65□□□□□ -0.22
NEDD4-202ENST00000435532 PHYHD1Q5SRE7 291 aa13.65□□□□□ -0.22
NEDD4-202ENST00000435532 GCSAMQ8N6F7 178 aa13.65□□□□□ -0.22
NEDD4-202ENST00000435532 HSD17B10Q99714 261 aaKnown RBP13.65□□□□□ -0.22
NEDD4-202ENST00000435532 POM121CA8CG34 1229 aa13.64□□□□□ -0.23
NEDD4-202ENST00000435532 PGA4P0DJD7 388 aa13.64□□□□□ -0.23
NEDD4-202ENST00000435532 LCN15Q6UWW0 184 aa13.64□□□□□ -0.23
NEDD4-202ENST00000435532 IL19Q9UHD0 177 aa13.64□□□□□ -0.23
NEDD4-202ENST00000435532 PITPNC1Q9UKF7 332 aa13.64□□□□□ -0.23
NEDD4-202ENST00000435532 PRNDQ9UKY0 176 aa13.64□□□□□ -0.23
NEDD4-202ENST00000435532 DICER1Q9UPY3 1922 aaKnown RBP13.64□□□□□ -0.23
NEDD4-202ENST00000435532 COX5BP10606 129 aa13.64□□□□□ -0.23
NEDD4-202ENST00000435532 RIPPLY2Q5TAB7 128 aa13.64□□□□□ -0.23
NEDD4-202ENST00000435532 DMKNQ6E0U4 476 aaPredicted RBP13.64□□□□□ -0.23
NEDD4-202ENST00000435532 OR5B3Q8NH48 314 aa13.64□□□□□ -0.23
NEDD4-202ENST00000435532 NTNG2Q96CW9 530 aa13.64□□□□□ -0.23
NEDD4-202ENST00000435532 A0A0U1RQV5 110 aa13.64□□□□□ -0.23
NEDD4-202ENST00000435532 ZNF320A2RRD8 509 aa13.64□□□□□ -0.23
NEDD4-202ENST00000435532 FOXH1O75593 365 aa13.64□□□□□ -0.23
NEDD4-202ENST00000435532 S100A8P05109 93 aa13.64□□□□□ -0.23
NEDD4-202ENST00000435532 CEACAM21Q3KPI0 293 aa13.64□□□□□ -0.23
NEDD4-202ENST00000435532 TIMP4Q99727 224 aa13.64□□□□□ -0.23
NEDD4-202ENST00000435532 RNF122Q9H9V4 155 aa13.64□□□□□ -0.23
NEDD4-202ENST00000435532 SERTM2A0A1B0GWG4 89 aa13.64□□□□□ -0.23
NEDD4-202ENST00000435532 MGST3O14880 152 aa13.64□□□□□ -0.23
NEDD4-202ENST00000435532 SYNGR3O43761 229 aa13.64□□□□□ -0.23
NEDD4-202ENST00000435532 DUS4LO95620 317 aaKnown RBP13.64□□□□□ -0.23
NEDD4-202ENST00000435532 MMP16P51512 607 aa13.64□□□□□ -0.23
NEDD4-202ENST00000435532 GPR27Q9NS67 375 aa13.64□□□□□ -0.23
NEDD4-202ENST00000435532 KLK11Q9UBX7 282 aa13.64□□□□□ -0.23
NEDD4-202ENST00000435532 SIPA1L1O43166 1804 aa13.64□□□□□ -0.23
NEDD4-202ENST00000435532 NTN1O95631 604 aa13.64□□□□□ -0.23
NEDD4-202ENST00000435532 CD200P41217 278 aa13.64□□□□□ -0.23
NEDD4-202ENST00000435532 SPACA3Q8IXA5 215 aa13.64□□□□□ -0.23
NEDD4-202ENST00000435532 WDR31Q8NA23 367 aa13.64□□□□□ -0.23
NEDD4-202ENST00000435532 DUSP18Q8NEJ0 188 aa13.64□□□□□ -0.23
NEDD4-202ENST00000435532 MARS2Q96GW9 593 aaKnown RBP13.64□□□□□ -0.23
NEDD4-202ENST00000435532 GAPDHP04406 335 aaKnown RBP13.63□□□□□ -0.23
NEDD4-202ENST00000435532 TAGLNQ01995 201 aaKnown RBP13.63□□□□□ -0.23
NEDD4-202ENST00000435532 IL13RA2Q14627 380 aa13.63□□□□□ -0.23
NEDD4-202ENST00000435532 INPP5JQ15735 1006 aaPredicted RBP13.63□□□□□ -0.23
NEDD4-202ENST00000435532 TEX30Q5JUR7 227 aa13.63□□□□□ -0.23
NEDD4-202ENST00000435532 CRIPAKQ8N1N5 446 aa13.63□□□□□ -0.23
NEDD4-202ENST00000435532 ITLN1Q8WWA0 313 aa13.63□□□□□ -0.23
NEDD4-202ENST00000435532 SAV1Q9H4B6 383 aaPredicted RBP13.63□□□□□ -0.23
NEDD4-202ENST00000435532 PCDHGA9Q9Y5G4 932 aaKnown RBP13.63□□□□□ -0.23
NEDD4-202ENST00000435532 A1L4Q6 167 aa13.63□□□□□ -0.23
NEDD4-202ENST00000435532 FFAR1O14842 300 aa13.63□□□□□ -0.23
NEDD4-202ENST00000435532 GNG7O60262 68 aa13.63□□□□□ -0.23
NEDD4-202ENST00000435532 PRSS12P56730 875 aa13.63□□□□□ -0.23
NEDD4-202ENST00000435532 ZNF260Q3ZCT1 412 aa13.63□□□□□ -0.23
NEDD4-202ENST00000435532 OR4A4PQ8NGN8 299 aa13.63□□□□□ -0.23
NEDD4-202ENST00000435532 BCL2L2Q92843 193 aaPredicted RBP13.63□□□□□ -0.23
NEDD4-202ENST00000435532 FRRS1LQ9P0K9 344 aa13.63□□□□□ -0.23
NEDD4-202ENST00000435532 GEMIN2O14893 280 aaKnown RBP13.63□□□□□ -0.23
NEDD4-202ENST00000435532 SFT2D2O95562 160 aa13.63□□□□□ -0.23
NEDD4-202ENST00000435532 CD59P13987 128 aa13.63□□□□□ -0.23
NEDD4-202ENST00000435532 FNDC7Q5VTL7 733 aa13.63□□□□□ -0.23
NEDD4-202ENST00000435532 BTNL8Q6UX41 500 aa13.63□□□□□ -0.23
NEDD4-202ENST00000435532 SKA3Q8IX90 412 aa13.63□□□□□ -0.23
NEDD4-202ENST00000435532 OR5H6Q8NGV6 325 aa13.63□□□□□ -0.23
NEDD4-202ENST00000435532 MARC2Q969Z3 335 aa13.63□□□□□ -0.23
NEDD4-202ENST00000435532 APOBEC3AP31941 199 aaPredicted RBP13.63□□□□□ -0.23
NEDD4-202ENST00000435532 RPS10P46783 165 aaKnown RBP13.63□□□□□ -0.23
NEDD4-202ENST00000435532 HOXA4Q00056 320 aaPredicted RBP13.63□□□□□ -0.23
NEDD4-202ENST00000435532 ATP6V1FQ16864 119 aa13.63□□□□□ -0.23
NEDD4-202ENST00000435532 OR8G5Q8NG78 346 aa13.63□□□□□ -0.23
NEDD4-202ENST00000435532 SLC45A2Q9UMX9 530 aa13.63□□□□□ -0.23
NEDD4-202ENST00000435532 RPL36A-HNRNPH2H7BZ11 118 aa13.62□□□□□ -0.23
NEDD4-202ENST00000435532 GPR137Q96N19 417 aa13.62□□□□□ -0.23
NEDD4-202ENST00000435532 IGHV3-13P01766 116 aa13.62□□□□□ -0.23
NEDD4-202ENST00000435532 IGHV3-7P01780 117 aa13.62□□□□□ -0.23
NEDD4-202ENST00000435532 GABRB1P18505 474 aa13.62□□□□□ -0.23
NEDD4-202ENST00000435532 TMEM41BQ5BJD5 291 aa13.62□□□□□ -0.23
NEDD4-202ENST00000435532 SLC25A47Q6Q0C1 308 aa13.62□□□□□ -0.23
NEDD4-202ENST00000435532 RAB18Q9NP72 206 aa13.62□□□□□ -0.23
NEDD4-202ENST00000435532 RASL12Q9NYN1 266 aa13.62□□□□□ -0.23
NEDD4-202ENST00000435532 PTP4A3O75365 173 aa13.62□□□□□ -0.23
NEDD4-202ENST00000435532 ETV3LQ6ZN32 361 aa13.62□□□□□ -0.23
NEDD4-202ENST00000435532 MITD1Q8WV92 249 aa13.62□□□□□ -0.23
NEDD4-202ENST00000435532 CCL13Q99616 98 aa13.62□□□□□ -0.23
NEDD4-202ENST00000435532 RSRP1Q9BUV0 290 aa13.62□□□□□ -0.23
NEDD4-202ENST00000435532 ZNF703Q9H7S9 590 aaPredicted RBP13.62□□□□□ -0.23
NEDD4-202ENST00000435532 MTFP1Q9UDX5 166 aa13.62□□□□□ -0.23
NEDD4-202ENST00000435532 A0A0A6YYJ9 748 aa13.62□□□□□ -0.23
NEDD4-202ENST00000435532 TXNDC12O95881 172 aa13.62□□□□□ -0.23
NEDD4-202ENST00000435532 IGF2P01344 180 aa13.62□□□□□ -0.23
NEDD4-202ENST00000435532 SLC25A4P12235 298 aa13.62□□□□□ -0.23
NEDD4-202ENST00000435532 MMDQ15546 238 aa13.62□□□□□ -0.23
NEDD4-202ENST00000435532 MUC15Q8N387 334 aa13.62□□□□□ -0.23
NEDD4-202ENST00000435532 TUBGCP6Q96RT7 1819 aa13.62□□□□□ -0.23
NEDD4-202ENST00000435532 TMEM8BA6NDV4 472 aa13.62□□□□□ -0.23
NEDD4-202ENST00000435532 K7N7A8 449 aa13.62□□□□□ -0.23
NEDD4-202ENST00000435532 SLC38A11Q08AI6 406 aa13.62□□□□□ -0.23
NEDD4-202ENST00000435532 FLVCR2Q9UPI3 526 aa13.62□□□□□ -0.23
NEDD4-202ENST00000435532 SSTP61278 116 aa13.61□□□□□ -0.23
NEDD4-202ENST00000435532 RPS4XP62701 263 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms