RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 BATF2Q8N1L9 274 aa15.96■□□□□ 0.15
CLK1-205ENST00000434813 SVBPQ8N300 66 aa15.96■□□□□ 0.15
CLK1-205ENST00000434813 OR11L1Q8NGX0 322 aa15.96■□□□□ 0.15
CLK1-205ENST00000434813 IL17BQ9UHF5 180 aa15.96■□□□□ 0.15
CLK1-205ENST00000434813 CARHSP1Q9Y2V2 147 aaKnown RBP15.96■□□□□ 0.15
CLK1-205ENST00000434813 RIF1Q5UIP0 2472 aaKnown RBP15.96■□□□□ 0.14
CLK1-205ENST00000434813 NAPSAO96009 420 aa15.95■□□□□ 0.14
CLK1-205ENST00000434813 ARHGDIBP52566 201 aa15.95■□□□□ 0.14
CLK1-205ENST00000434813 RAB1AP62820 205 aa15.95■□□□□ 0.14
CLK1-205ENST00000434813 MPV17LQ2QL34 196 aa15.95■□□□□ 0.14
CLK1-205ENST00000434813 FAM185AQ8N0U4 392 aa15.95■□□□□ 0.14
CLK1-205ENST00000434813 FBXO9Q9UK97 447 aaPredicted RBP15.95■□□□□ 0.14
CLK1-205ENST00000434813 FREM1Q5H8C1 2179 aa15.95■□□□□ 0.14
CLK1-205ENST00000434813 FAM74A7A6NL05 159 aa15.95■□□□□ 0.14
CLK1-205ENST00000434813 DUSP1P28562 367 aa15.95■□□□□ 0.14
CLK1-205ENST00000434813 SRSF3P84103 164 aaKnown RBP15.95■□□□□ 0.14
CLK1-205ENST00000434813 FAM74A3Q4VXF1 159 aa15.95■□□□□ 0.14
CLK1-205ENST00000434813 IGSF11Q5DX21 431 aa15.95■□□□□ 0.14
CLK1-205ENST00000434813 OR5T2Q8NGG2 359 aa15.95■□□□□ 0.14
CLK1-205ENST00000434813 Q9N2K0 584 aa15.95■□□□□ 0.14
CLK1-205ENST00000434813 ZNF732B4DXR9 585 aa15.94■□□□□ 0.14
CLK1-205ENST00000434813 GPR31O00270 319 aa15.94■□□□□ 0.14
CLK1-205ENST00000434813 PHF1O43189 567 aaPredicted RBP15.94■□□□□ 0.14
CLK1-205ENST00000434813 MED6O75586 246 aa15.94■□□□□ 0.14
CLK1-205ENST00000434813 CD82P27701 267 aa15.94■□□□□ 0.14
CLK1-205ENST00000434813 LPAR6P43657 344 aa15.94■□□□□ 0.14
CLK1-205ENST00000434813 NUFIP2Q7Z417 695 aaKnown RBP15.94■□□□□ 0.14
CLK1-205ENST00000434813 MCEMP1Q8IX19 187 aa15.94■□□□□ 0.14
CLK1-205ENST00000434813 MKXQ8IYA7 352 aa15.94■□□□□ 0.14
CLK1-205ENST00000434813 PUSL1Q8N0Z8 303 aaKnown RBP15.94■□□□□ 0.14
CLK1-205ENST00000434813 UBAC2Q8NBM4 344 aa15.94■□□□□ 0.14
CLK1-205ENST00000434813 OR5A2Q8NGI9 324 aa15.94■□□□□ 0.14
CLK1-205ENST00000434813 FER1L6-AS2Q96M78 137 aa15.94■□□□□ 0.14
CLK1-205ENST00000434813 TMED3Q9Y3Q3 217 aa15.94■□□□□ 0.14
CLK1-205ENST00000434813 KLRC4-KLRK1H3BQV0 150 aa15.94■□□□□ 0.14
CLK1-205ENST00000434813 ZNHIT1O43257 154 aa15.94■□□□□ 0.14
CLK1-205ENST00000434813 NGFP01138 241 aa15.94■□□□□ 0.14
CLK1-205ENST00000434813 CAV2P51636 162 aa15.94■□□□□ 0.14
CLK1-205ENST00000434813 BLOC1S1P78537 153 aa15.94■□□□□ 0.14
CLK1-205ENST00000434813 SRPXP78539 464 aa15.94■□□□□ 0.14
CLK1-205ENST00000434813 PLP2Q04941 152 aa15.94■□□□□ 0.14
CLK1-205ENST00000434813 C3AR1Q16581 482 aa15.94■□□□□ 0.14
CLK1-205ENST00000434813 TP53RKQ96S44 253 aa15.94■□□□□ 0.14
CLK1-205ENST00000434813 HRH4Q9H3N8 390 aa15.94■□□□□ 0.14
CLK1-205ENST00000434813 MTCH1Q9NZJ7 389 aa15.94■□□□□ 0.14
CLK1-205ENST00000434813 TRAPPC2LH3BP13 241 aa15.93■□□□□ 0.14
CLK1-205ENST00000434813 CDK2AP1O14519 115 aa15.93■□□□□ 0.14
CLK1-205ENST00000434813 IL13RA2Q14627 380 aa15.93■□□□□ 0.14
CLK1-205ENST00000434813 GUCA2BQ16661 112 aa15.93■□□□□ 0.14
CLK1-205ENST00000434813 DPPA2Q7Z7J5 298 aa15.93■□□□□ 0.14
CLK1-205ENST00000434813 LDLRAD3Q86YD5 345 aa15.93■□□□□ 0.14
CLK1-205ENST00000434813 ZFP62Q8NB50 900 aaPredicted RBP15.93■□□□□ 0.14
CLK1-205ENST00000434813 ERGIC1Q969X5 290 aa15.93■□□□□ 0.14
CLK1-205ENST00000434813 HS3ST6Q96QI5 342 aa15.93■□□□□ 0.14
CLK1-205ENST00000434813 ARV1Q9H2C2 271 aa15.93■□□□□ 0.14
CLK1-205ENST00000434813 ZNF552Q9H707 407 aaPredicted RBP15.93■□□□□ 0.14
CLK1-205ENST00000434813 RHOFQ9HBH0 211 aa15.93■□□□□ 0.14
CLK1-205ENST00000434813 PARP11Q9NR21 331 aa15.93■□□□□ 0.14
CLK1-205ENST00000434813 UQCC1Q9NVA1 299 aa15.93■□□□□ 0.14
CLK1-205ENST00000434813 C3orf85A0A1B0GTC6 90 aa15.92■□□□□ 0.14
CLK1-205ENST00000434813 CD300LBA8K4G0 201 aa15.92■□□□□ 0.14
CLK1-205ENST00000434813 F8W036 122 aa15.92■□□□□ 0.14
CLK1-205ENST00000434813 TOR1AO14656 332 aa15.92■□□□□ 0.14
CLK1-205ENST00000434813 MPPED1O15442 326 aa15.92■□□□□ 0.14
CLK1-205ENST00000434813 GPR137BO60478 399 aa15.92■□□□□ 0.14
CLK1-205ENST00000434813 GFRA3O60609 400 aa15.92■□□□□ 0.14
CLK1-205ENST00000434813 DIRAS3O95661 229 aa15.92■□□□□ 0.14
CLK1-205ENST00000434813 P2RY1P47900 373 aa15.92■□□□□ 0.14
CLK1-205ENST00000434813 GPR157Q5UAW9 335 aa15.92■□□□□ 0.14
CLK1-205ENST00000434813 FBXW12Q6X9E4 464 aa15.92■□□□□ 0.14
CLK1-205ENST00000434813 LINC00596Q86U02 117 aa15.92■□□□□ 0.14
CLK1-205ENST00000434813 SLC35G3Q8N808 338 aa15.92■□□□□ 0.14
CLK1-205ENST00000434813 CLRN3Q8NCR9 226 aa15.92■□□□□ 0.14
CLK1-205ENST00000434813 OR52M1Q8NGK5 317 aa15.92■□□□□ 0.14
CLK1-205ENST00000434813 SEC11CQ9BY50 192 aa15.92■□□□□ 0.14
CLK1-205ENST00000434813 SMIM3Q9BZL3 60 aa15.92■□□□□ 0.14
CLK1-205ENST00000434813 LIPGQ9Y5X9 500 aa15.92■□□□□ 0.14
CLK1-205ENST00000434813 ST8SIA3O43173 380 aa15.92■□□□□ 0.14
CLK1-205ENST00000434813 TK1P04183 234 aa15.92■□□□□ 0.14
CLK1-205ENST00000434813 GLI4P10075 376 aa15.92■□□□□ 0.14
CLK1-205ENST00000434813 KCNJ3P48549 501 aa15.92■□□□□ 0.14
CLK1-205ENST00000434813 RND3P61587 244 aa15.92■□□□□ 0.14
CLK1-205ENST00000434813 ZNF169Q14929 603 aaPredicted RBP15.92■□□□□ 0.14
CLK1-205ENST00000434813 BTNL8Q6UX41 500 aa15.92■□□□□ 0.14
CLK1-205ENST00000434813 SPAG16Q8N0X2 631 aa15.92■□□□□ 0.14
CLK1-205ENST00000434813 OR4D5Q8NGN0 318 aa15.92■□□□□ 0.14
CLK1-205ENST00000434813 OR5P3Q8WZ94 311 aa15.92■□□□□ 0.14
CLK1-205ENST00000434813 HIST1H2AAQ96QV6 131 aa15.92■□□□□ 0.14
CLK1-205ENST00000434813 TREM1Q9NP99 234 aa15.92■□□□□ 0.14
CLK1-205ENST00000434813 IL36RNQ9UBH0 155 aa15.92■□□□□ 0.14
CLK1-205ENST00000434813 PURGQ9UJV8 347 aaKnown RBP15.92■□□□□ 0.14
CLK1-205ENST00000434813 SHANK1Q9Y566 2161 aa15.92■□□□□ 0.14
CLK1-205ENST00000434813 KIR2DS1A0A191URI9 304 aa15.91■□□□□ 0.14
CLK1-205ENST00000434813 FBXO24O75426 580 aa15.91■□□□□ 0.14
CLK1-205ENST00000434813 GNRHRP30968 328 aa15.91■□□□□ 0.14
CLK1-205ENST00000434813 KIR2DS4P43632 304 aa15.91■□□□□ 0.14
CLK1-205ENST00000434813 KIR2DS1Q14954 304 aa15.91■□□□□ 0.14
CLK1-205ENST00000434813 GTF3AQ92664 365 aaKnown RBP15.91■□□□□ 0.14
CLK1-205ENST00000434813 TMEM222Q9H0R3 208 aa15.91■□□□□ 0.14
CLK1-205ENST00000434813 PLK3Q9H4B4 646 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms