RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 FLI1Q01543 452 aaPredicted RBP8.96□□□□□ -0.98
CD44-210ENST00000434472 HMGN3Q15651 99 aa8.96□□□□□ -0.98
CD44-210ENST00000434472 FAM74A3Q4VXF1 159 aa8.96□□□□□ -0.98
CD44-210ENST00000434472 DHRS7BQ6IAN0 325 aaPredicted RBP8.96□□□□□ -0.98
CD44-210ENST00000434472 LDLRAD3Q86YD5 345 aa8.96□□□□□ -0.98
CD44-210ENST00000434472 POM121L2Q96KW2 1035 aa8.96□□□□□ -0.98
CD44-210ENST00000434472 NRIP2Q9BQI9 281 aa8.96□□□□□ -0.98
CD44-210ENST00000434472 GINS3Q9BRX5 216 aa8.96□□□□□ -0.98
CD44-210ENST00000434472 GP6Q9HCN6 339 aa8.96□□□□□ -0.98
CD44-210ENST00000434472 UBE2J1Q9Y385 318 aaPredicted RBP8.96□□□□□ -0.98
CD44-210ENST00000434472 TRIOBPQ9H2D6 2365 aa8.96□□□□□ -0.98
CD44-210ENST00000434472 PCSK5Q92824 1860 aa8.96□□□□□ -0.98
CD44-210ENST00000434472 TRIOO75962 3097 aa8.96□□□□□ -0.98
CD44-210ENST00000434472 TNRC18O15417 2968 aaPredicted RBP8.95□□□□□ -0.98
CD44-210ENST00000434472 TRBV6-6A0A0A6YYG2 114 aa8.95□□□□□ -0.98
CD44-210ENST00000434472 ATP6V1G2-DDX39BF2Z307 99 aa8.95□□□□□ -0.98
CD44-210ENST00000434472 NAPSAO96009 420 aa8.95□□□□□ -0.98
CD44-210ENST00000434472 H2AFB1P0C5Y9 115 aa8.95□□□□□ -0.98
CD44-210ENST00000434472 CD59P13987 128 aa8.95□□□□□ -0.98
CD44-210ENST00000434472 ADCYAP1P18509 176 aa8.95□□□□□ -0.98
CD44-210ENST00000434472 S100GP29377 79 aa8.95□□□□□ -0.98
CD44-210ENST00000434472 RFC3P40938 356 aa8.95□□□□□ -0.98
CD44-210ENST00000434472 MEOX1P50221 254 aa8.95□□□□□ -0.98
CD44-210ENST00000434472 GPM6AP51674 278 aa8.95□□□□□ -0.98
CD44-210ENST00000434472 AKR1C2P52895 323 aa8.95□□□□□ -0.98
CD44-210ENST00000434472 DVL1P1P54792 670 aaPredicted RBP8.95□□□□□ -0.98
CD44-210ENST00000434472 AKR1C1Q04828 323 aa8.95□□□□□ -0.98
CD44-210ENST00000434472 GUCA2BQ16661 112 aa8.95□□□□□ -0.98
CD44-210ENST00000434472 FAM76BQ5HYJ3 339 aa8.95□□□□□ -0.98
CD44-210ENST00000434472 C9orf135Q5VTT2 229 aa8.95□□□□□ -0.98
CD44-210ENST00000434472 Q6ZRG5 221 aa8.95□□□□□ -0.98
CD44-210ENST00000434472 ZNF573Q86YE8 665 aa8.95□□□□□ -0.98
CD44-210ENST00000434472 ZNF695Q8IW36 515 aa8.95□□□□□ -0.98
CD44-210ENST00000434472 OR4D5Q8NGN0 318 aa8.95□□□□□ -0.98
CD44-210ENST00000434472 LYPD6BQ8NI32 183 aa8.95□□□□□ -0.98
CD44-210ENST00000434472 HPSE2Q8WWQ2 592 aa8.95□□□□□ -0.98
CD44-210ENST00000434472 TMEM56Q96MV1 263 aa8.95□□□□□ -0.98
CD44-210ENST00000434472 HES7Q9BYE0 225 aa8.95□□□□□ -0.98
CD44-210ENST00000434472 TMEM222Q9H0R3 208 aa8.95□□□□□ -0.98
CD44-210ENST00000434472 RCL1Q9Y2P8 373 aaKnown RBP8.95□□□□□ -0.98
CD44-210ENST00000434472 TMEM56-RWDD3S4R434 201 aa8.95□□□□□ -0.98
CD44-210ENST00000434472 LNP1A1A4G5 178 aa8.94□□□□□ -0.98
CD44-210ENST00000434472 CD300LBA8K4G0 201 aa8.94□□□□□ -0.98
CD44-210ENST00000434472 H7C2Y5 167 aa8.94□□□□□ -0.98
CD44-210ENST00000434472 J3QW42 95 aa8.94□□□□□ -0.98
CD44-210ENST00000434472 SIGLEC5O15389 551 aa8.94□□□□□ -0.98
CD44-210ENST00000434472 TSPAN9O75954 239 aa8.94□□□□□ -0.98
CD44-210ENST00000434472 CD5P06127 495 aa8.94□□□□□ -0.98
CD44-210ENST00000434472 MMP9P14780 707 aa8.94□□□□□ -0.98
CD44-210ENST00000434472 CD46P15529 392 aa8.94□□□□□ -0.98
CD44-210ENST00000434472 MUC1P15941 1255 aaPredicted RBP8.94□□□□□ -0.98
CD44-210ENST00000434472 ARHGDIBP52566 201 aa8.94□□□□□ -0.98
CD44-210ENST00000434472 SLC10A1Q14973 349 aa8.94□□□□□ -0.98
CD44-210ENST00000434472 PDCD1Q15116 288 aa8.94□□□□□ -0.98
CD44-210ENST00000434472 LINC00696Q6ZRV3 163 aa8.94□□□□□ -0.98
CD44-210ENST00000434472 FAM219AQ8IW50 185 aa8.94□□□□□ -0.98
CD44-210ENST00000434472 SLC35G3Q8N808 338 aa8.94□□□□□ -0.98
CD44-210ENST00000434472 MDS2Q8NDY4 140 aa8.94□□□□□ -0.98
CD44-210ENST00000434472 OR11L1Q8NGX0 322 aa8.94□□□□□ -0.98
CD44-210ENST00000434472 NEK7Q8TDX7 302 aa8.94□□□□□ -0.98
CD44-210ENST00000434472 OR5P3Q8WZ94 311 aa8.94□□□□□ -0.98
CD44-210ENST00000434472 IL22RA2Q969J5 263 aa8.94□□□□□ -0.98
CD44-210ENST00000434472 SMIM3Q9BZL3 60 aa8.94□□□□□ -0.98
CD44-210ENST00000434472 PKIBQ9C010 78 aa8.94□□□□□ -0.98
CD44-210ENST00000434472 SLC25A31Q9H0C2 315 aa8.94□□□□□ -0.98
CD44-210ENST00000434472 TLNRD1Q9H1K6 362 aa8.94□□□□□ -0.98
CD44-210ENST00000434472 PLA2G3Q9NZ20 509 aa8.94□□□□□ -0.98
CD44-210ENST00000434472 LUZP4Q9P127 313 aa8.94□□□□□ -0.98
CD44-210ENST00000434472 ATP23Q9Y6H3 246 aa8.94□□□□□ -0.98
CD44-210ENST00000434472 M0R296 226 aa8.94□□□□□ -0.98
CD44-210ENST00000434472 TUSC2O75896 110 aa8.94□□□□□ -0.98
CD44-210ENST00000434472 TSPAN15O95858 294 aa8.94□□□□□ -0.98
CD44-210ENST00000434472 DANCRP0C864 163 aa8.94□□□□□ -0.98
CD44-210ENST00000434472 SPP1P10451 314 aa8.94□□□□□ -0.98
CD44-210ENST00000434472 GNRHRP30968 328 aa8.94□□□□□ -0.98
CD44-210ENST00000434472 NKX2-1P43699 371 aaPredicted RBP8.94□□□□□ -0.98
CD44-210ENST00000434472 KCNJ3P48549 501 aa8.94□□□□□ -0.98
CD44-210ENST00000434472 GNG3P63215 75 aa8.94□□□□□ -0.98
CD44-210ENST00000434472 SRSF3P84103 164 aaKnown RBP8.94□□□□□ -0.98
CD44-210ENST00000434472 IL24Q13007 206 aa8.94□□□□□ -0.98
CD44-210ENST00000434472 DAZAP2Q15038 168 aaPredicted RBP8.94□□□□□ -0.98
CD44-210ENST00000434472 PEA15Q15121 130 aa8.94□□□□□ -0.98
CD44-210ENST00000434472 IGSF11Q5DX21 431 aa8.94□□□□□ -0.98
CD44-210ENST00000434472 SPIN3Q5JUX0 258 aa8.94□□□□□ -0.98
CD44-210ENST00000434472 PLA2G2CQ5R387 149 aa8.94□□□□□ -0.98
CD44-210ENST00000434472 MEX3BQ6ZN04 569 aaKnown RBP8.94□□□□□ -0.98
CD44-210ENST00000434472 Q6ZPA2 131 aa8.94□□□□□ -0.98
CD44-210ENST00000434472 TBC1D26Q86UD7 250 aa8.94□□□□□ -0.98
CD44-210ENST00000434472 CMTM1Q8IZ96 169 aa8.94□□□□□ -0.98
CD44-210ENST00000434472 KMT2EQ8IZD2 1858 aa8.94□□□□□ -0.98
CD44-210ENST00000434472 KDF1Q8NAX2 398 aaPredicted RBP8.94□□□□□ -0.98
CD44-210ENST00000434472 ZFP62Q8NB50 900 aaPredicted RBP8.94□□□□□ -0.98
CD44-210ENST00000434472 OR52M1Q8NGK5 317 aa8.94□□□□□ -0.98
CD44-210ENST00000434472 OR1K1Q8NGR3 316 aa8.94□□□□□ -0.98
CD44-210ENST00000434472 ERGIC1Q969X5 290 aa8.94□□□□□ -0.98
CD44-210ENST00000434472 TP53RKQ96S44 253 aa8.94□□□□□ -0.98
CD44-210ENST00000434472 FGF23Q9GZV9 251 aaPredicted RBP8.94□□□□□ -0.98
CD44-210ENST00000434472 TMEM231Q9H6L2 316 aa8.94□□□□□ -0.98
CD44-210ENST00000434472 IFT22Q9H7X7 185 aa8.94□□□□□ -0.98
CD44-210ENST00000434472 MTCH1Q9NZJ7 389 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms