RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 PCDHB16Q9NRJ7 776 aa15.05■□□□□ -0
HLA-F-220ENST00000434407 NDUFB11Q9NX14 153 aa15.05■□□□□ -0
HLA-F-220ENST00000434407 MRPS28Q9Y2Q9 187 aaKnown RBP15.05■□□□□ -0
HLA-F-220ENST00000434407 SOX21Q9Y651 276 aaPredicted RBP15.05■□□□□ -0
HLA-F-220ENST00000434407 TRAV24A0A0B4J272 114 aa15.04■□□□□ -0
HLA-F-220ENST00000434407 C17orf98A8MV24 154 aa15.04■□□□□ -0
HLA-F-220ENST00000434407 DEGS1O15121 323 aa15.04■□□□□ -0
HLA-F-220ENST00000434407 RGS9O75916 674 aaPredicted RBP15.04■□□□□ -0
HLA-F-220ENST00000434407 RBP4P02753 201 aa15.04■□□□□ -0
HLA-F-220ENST00000434407 ZNF44P15621 663 aa15.04■□□□□ -0
HLA-F-220ENST00000434407 RBM11P57052 281 aaKnown RBP15.04■□□□□ -0
HLA-F-220ENST00000434407 FABP5Q01469 135 aa15.04■□□□□ -0
HLA-F-220ENST00000434407 BLMHQ13867 455 aa15.04■□□□□ -0
HLA-F-220ENST00000434407 GPR176Q14439 515 aa15.04■□□□□ -0
HLA-F-220ENST00000434407 PIGYQ3MUY2 71 aa15.04■□□□□ -0
HLA-F-220ENST00000434407 C1orf100Q5SVJ3 147 aa15.04■□□□□ -0
HLA-F-220ENST00000434407 HCP5Q6MZN7 132 aa15.04■□□□□ -0
HLA-F-220ENST00000434407 LINC00596Q86U02 117 aa15.04■□□□□ -0
HLA-F-220ENST00000434407 SIGLECL1Q8N7X8 197 aa15.04■□□□□ -0
HLA-F-220ENST00000434407 FCGR1BQ92637 280 aa15.04■□□□□ -0
HLA-F-220ENST00000434407 FOXRED1Q96CU9 486 aaPredicted RBP15.04■□□□□ -0
HLA-F-220ENST00000434407 NR1H4Q96RI1 486 aaPredicted RBP15.04■□□□□ -0
HLA-F-220ENST00000434407 S100A13Q99584 98 aa15.04■□□□□ -0
HLA-F-220ENST00000434407 MDFIQ99750 246 aa15.04■□□□□ -0
HLA-F-220ENST00000434407 ESM1Q9NQ30 184 aa15.04■□□□□ -0
HLA-F-220ENST00000434407 LINC00312Q9Y6C7 94 aa15.04■□□□□ -0
HLA-F-220ENST00000434407 STAB1Q9NY15 2570 aa15.03■□□□□ -0
HLA-F-220ENST00000434407 CSTBP04080 98 aaKnown RBP15.03■□□□□ -0
HLA-F-220ENST00000434407 CCL3L1P16619 93 aa15.03■□□□□ -0
HLA-F-220ENST00000434407 UBE2E1P51965 193 aa15.03■□□□□ -0
HLA-F-220ENST00000434407 DLX1P56177 255 aa15.03■□□□□ -0
HLA-F-220ENST00000434407 P2RX3P56373 397 aa15.03■□□□□ -0
HLA-F-220ENST00000434407 EDDM3BP56851 147 aa15.03■□□□□ -0
HLA-F-220ENST00000434407 SRSF2Q01130 221 aaKnown RBP15.03■□□□□ -0
HLA-F-220ENST00000434407 PAX5Q02548 391 aa15.03■□□□□ -0
HLA-F-220ENST00000434407 GUCA2AQ02747 115 aa15.03■□□□□ -0
HLA-F-220ENST00000434407 KRTAP24-1Q3LI83 254 aa15.03■□□□□ -0
HLA-F-220ENST00000434407 SLC22A6Q4U2R8 563 aa15.03■□□□□ -0
HLA-F-220ENST00000434407 RUSC1-AS1Q66K80 236 aa15.03■□□□□ -0
HLA-F-220ENST00000434407 NCR3LG1Q68D85 454 aa15.03■□□□□ -0
HLA-F-220ENST00000434407 GLIPR1L1Q6UWM5 242 aa15.03■□□□□ -0
HLA-F-220ENST00000434407 ZDHHC22Q8N966 263 aa15.03■□□□□ -0
HLA-F-220ENST00000434407 ZFAND2BQ8WV99 257 aa15.03■□□□□ -0
HLA-F-220ENST00000434407 MRPS24Q96EL2 167 aaKnown RBP15.03■□□□□ -0
HLA-F-220ENST00000434407 JMJD8Q96S16 334 aa15.03■□□□□ -0
HLA-F-220ENST00000434407 PPA2Q9H2U2 334 aa15.03■□□□□ -0
HLA-F-220ENST00000434407 ST3GAL6Q9Y274 331 aa15.03■□□□□ -0
HLA-F-220ENST00000434407 A0A1W2PP11 408 aa15.02■□□□□ -0
HLA-F-220ENST00000434407 hADV38S2A0JD32 116 aa15.02■□□□□ -0
HLA-F-220ENST00000434407 ARL6IP5O75915 188 aa15.02■□□□□ -0
HLA-F-220ENST00000434407 ZNF728P0DKX0 622 aa15.02■□□□□ -0
HLA-F-220ENST00000434407 GTF2F2P13984 249 aa15.02■□□□□ -0
HLA-F-220ENST00000434407 SERPINA2P20848 420 aa15.02■□□□□ -0
HLA-F-220ENST00000434407 GALP22466 123 aa15.02■□□□□ -0
HLA-F-220ENST00000434407 SCN1BQ07699 218 aa15.02■□□□□ -0
HLA-F-220ENST00000434407 KLRD1Q13241 179 aa15.02■□□□□ -0
HLA-F-220ENST00000434407 EDDM3AQ14507 147 aa15.02■□□□□ -0
HLA-F-220ENST00000434407 GLT8D1Q68CQ7 371 aa15.02■□□□□ -0
HLA-F-220ENST00000434407 AWAT2Q6E213 333 aa15.02■□□□□ -0
HLA-F-220ENST00000434407 TPRX1Q8N7U7 411 aa15.02■□□□□ -0
HLA-F-220ENST00000434407 TMEM158Q8WZ71 300 aa15.02■□□□□ -0
HLA-F-220ENST00000434407 CORO2AQ92828 525 aa15.02■□□□□ -0
HLA-F-220ENST00000434407 COQ2Q96H96 371 aa15.02■□□□□ -0
HLA-F-220ENST00000434407 GFI1Q99684 422 aa15.02■□□□□ -0
HLA-F-220ENST00000434407 NCOR1P1Q9H4R4 102 aa15.02■□□□□ -0
HLA-F-220ENST00000434407 GHRLQ9UBU3 117 aa15.02■□□□□ -0
HLA-F-220ENST00000434407 hCG_1809904A0A1W2PP81 198 aa15.01□□□□□ -0.01
HLA-F-220ENST00000434407 A0A1W2PPE2 198 aa15.01□□□□□ -0.01
HLA-F-220ENST00000434407 A0A1W2PR64 198 aa15.01□□□□□ -0.01
HLA-F-220ENST00000434407 A0A1W2PRV1 198 aa15.01□□□□□ -0.01
HLA-F-220ENST00000434407 FUOMA2VDF0 154 aa15.01□□□□□ -0.01
HLA-F-220ENST00000434407 GEMIN2O14893 280 aaKnown RBP15.01□□□□□ -0.01
HLA-F-220ENST00000434407 KCNJ3P48549 501 aa15.01□□□□□ -0.01
HLA-F-220ENST00000434407 PRB3Q04118 309 aaPredicted RBP15.01□□□□□ -0.01
HLA-F-220ENST00000434407 MPV17LQ2QL34 196 aa15.01□□□□□ -0.01
HLA-F-220ENST00000434407 DEFB112Q30KQ8 113 aa15.01□□□□□ -0.01
HLA-F-220ENST00000434407 SLITRK2Q9H156 845 aa15.01□□□□□ -0.01
HLA-F-220ENST00000434407 ZNF581Q9P0T4 197 aa15.01□□□□□ -0.01
HLA-F-220ENST00000434407 UBE2J1Q9Y385 318 aaPredicted RBP15.01□□□□□ -0.01
HLA-F-220ENST00000434407 TRDV1A0A1B0GX56 115 aa15□□□□□ -0.01
HLA-F-220ENST00000434407 CCRL2O00421 344 aa15□□□□□ -0.01
HLA-F-220ENST00000434407 SLC22A1O15245 554 aa15□□□□□ -0.01
HLA-F-220ENST00000434407 GLIPR1P48060 266 aa15□□□□□ -0.01
HLA-F-220ENST00000434407 ERVFRD-1P60508 538 aa15□□□□□ -0.01
HLA-F-220ENST00000434407 AESQ08117 197 aa15□□□□□ -0.01
HLA-F-220ENST00000434407 PAN3Q58A45 887 aaKnown RBP15□□□□□ -0.01
HLA-F-220ENST00000434407 PDZD9Q8IXQ8 264 aa15□□□□□ -0.01
HLA-F-220ENST00000434407 TMEM104Q8NE00 496 aa15□□□□□ -0.01
HLA-F-220ENST00000434407 ZNF714Q96N38 554 aa15□□□□□ -0.01
HLA-F-220ENST00000434407 HEXA-AS1Q9H8Q6 139 aa15□□□□□ -0.01
HLA-F-220ENST00000434407 MDFIC2A0A1B0GVS7 189 aa14.99□□□□□ -0.01
HLA-F-220ENST00000434407 ODAMA1E959 279 aa14.99□□□□□ -0.01
HLA-F-220ENST00000434407 FAM90A10PA6NDY2 464 aa14.99□□□□□ -0.01
HLA-F-220ENST00000434407 FAM90A18PA6NE21 464 aa14.99□□□□□ -0.01
HLA-F-220ENST00000434407 FAM90A16PA6NEW6 464 aa14.99□□□□□ -0.01
HLA-F-220ENST00000434407 FAM90A20PA6NIJ5 464 aa14.99□□□□□ -0.01
HLA-F-220ENST00000434407 FAM90A8PA6NJQ4 464 aa14.99□□□□□ -0.01
HLA-F-220ENST00000434407 FAM90A7PA6NKC0 464 aa14.99□□□□□ -0.01
HLA-F-220ENST00000434407 RNF212BA8MTL3 300 aa14.99□□□□□ -0.01
HLA-F-220ENST00000434407 FAM90A22PA8MWA6 464 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms