RNA–Protein interactions for RNA: ENST00000431357.1

USP4-205, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 5

Gene USP4, Length 2,141 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-205ENST00000431357 NME2P1O60361 137 aa9.76□□□□□ -0.85
USP4-205ENST00000431357 PRH1P02810 166 aa9.76□□□□□ -0.85
USP4-205ENST00000431357 AADACP22760 399 aa9.76□□□□□ -0.85
USP4-205ENST00000431357 ZNF92Q03936 586 aa9.76□□□□□ -0.85
USP4-205ENST00000431357 CEACAM16Q2WEN9 425 aa9.76□□□□□ -0.85
USP4-205ENST00000431357 PMS2CLQ68D20 193 aa9.76□□□□□ -0.85
USP4-205ENST00000431357 TCEAL6Q6IPX3 200 aa9.76□□□□□ -0.85
USP4-205ENST00000431357 OR52M1Q8NGK5 317 aa9.76□□□□□ -0.85
USP4-205ENST00000431357 TCTEX1D2Q8WW35 142 aa9.76□□□□□ -0.85
USP4-205ENST00000431357 C14orf79Q96F83 325 aa9.76□□□□□ -0.85
USP4-205ENST00000431357 BSCL2Q96G97 398 aaPredicted RBP9.76□□□□□ -0.85
USP4-205ENST00000431357 SCRT1Q9BWW7 348 aa9.76□□□□□ -0.85
USP4-205ENST00000431357 EIF5A2Q9GZV4 153 aaKnown RBP9.76□□□□□ -0.85
USP4-205ENST00000431357 PRDM14Q9GZV8 571 aa9.76□□□□□ -0.85
USP4-205ENST00000431357 GPR35Q9HC97 309 aa9.76□□□□□ -0.85
USP4-205ENST00000431357 ZNF581Q9P0T4 197 aa9.76□□□□□ -0.85
USP4-205ENST00000431357 SIT1Q9Y3P8 196 aa9.76□□□□□ -0.85
USP4-205ENST00000431357 C3orf85A0A1B0GTC6 90 aa9.76□□□□□ -0.85
USP4-205ENST00000431357 A0A1B0GV90 55 aa9.76□□□□□ -0.85
USP4-205ENST00000431357 DUXBA0A1W2PPF3 345 aa9.76□□□□□ -0.85
USP4-205ENST00000431357 TRDCB7Z8K6 153 aa9.76□□□□□ -0.85
USP4-205ENST00000431357 RPL36A-HNRNPH2H7BZ11 118 aa9.76□□□□□ -0.85
USP4-205ENST00000431357 MASP2O00187 686 aa9.76□□□□□ -0.85
USP4-205ENST00000431357 PPYP01298 95 aa9.76□□□□□ -0.85
USP4-205ENST00000431357 LMO1P25800 156 aa9.76□□□□□ -0.85
USP4-205ENST00000431357 NTF4P34130 210 aa9.76□□□□□ -0.85
USP4-205ENST00000431357 RGS19P49795 217 aa9.76□□□□□ -0.85
USP4-205ENST00000431357 CLDN15P56746 228 aa9.76□□□□□ -0.85
USP4-205ENST00000431357 RND3P61587 244 aa9.76□□□□□ -0.85
USP4-205ENST00000431357 ZFP36L1Q07352 338 aaKnown RBP9.76□□□□□ -0.85
USP4-205ENST00000431357 ZNF266Q14584 549 aa9.76□□□□□ -0.85
USP4-205ENST00000431357 TSPO2Q5TGU0 170 aa9.76□□□□□ -0.85
USP4-205ENST00000431357 ZNF468Q5VIY5 522 aaPredicted RBP9.76□□□□□ -0.85
USP4-205ENST00000431357 DPPA2Q7Z7J5 298 aa9.76□□□□□ -0.85
USP4-205ENST00000431357 WDR5BQ86VZ2 330 aa9.76□□□□□ -0.85
USP4-205ENST00000431357 ZNF561Q8N587 486 aa9.76□□□□□ -0.85
USP4-205ENST00000431357 HPSE2Q8WWQ2 592 aa9.76□□□□□ -0.85
USP4-205ENST00000431357 DYRK2Q92630 601 aa9.76□□□□□ -0.85
USP4-205ENST00000431357 HIST1H2BAQ96A08 127 aa9.76□□□□□ -0.85
USP4-205ENST00000431357 ADGRG7Q96K78 797 aa9.76□□□□□ -0.85
USP4-205ENST00000431357 ALKBH3Q96Q83 286 aaPredicted RBP9.76□□□□□ -0.85
USP4-205ENST00000431357 C2orf88Q9BSF0 95 aa9.76□□□□□ -0.85
USP4-205ENST00000431357 C1QTNF5Q9BXJ0 243 aa9.76□□□□□ -0.85
USP4-205ENST00000431357 ZDHHC8Q9ULC8 765 aa9.76□□□□□ -0.85
USP4-205ENST00000431357 KIAA1549Q9HCM3 1950 aa9.75□□□□□ -0.85
USP4-205ENST00000431357 CACNA1EQ15878 2313 aa9.75□□□□□ -0.85
USP4-205ENST00000431357 TRBV23-1A0A0A0MS06 115 aa9.75□□□□□ -0.85
USP4-205ENST00000431357 C7orf77A4D0Y5 90 aa9.75□□□□□ -0.85
USP4-205ENST00000431357 FAM221AA4D161 298 aa9.75□□□□□ -0.85
USP4-205ENST00000431357 GDF9O60383 454 aa9.75□□□□□ -0.85
USP4-205ENST00000431357 CRYABP02511 175 aaKnown RBP9.75□□□□□ -0.85
USP4-205ENST00000431357 CD81P60033 236 aa9.75□□□□□ -0.85
USP4-205ENST00000431357 HABP2Q14520 560 aaPredicted RBP9.75□□□□□ -0.85
USP4-205ENST00000431357 RHEBQ15382 184 aa9.75□□□□□ -0.85
USP4-205ENST00000431357 BRICD5Q6PL45 260 aa9.75□□□□□ -0.85
USP4-205ENST00000431357 CLEC9AQ6UXN8 241 aa9.75□□□□□ -0.85
USP4-205ENST00000431357 REC114Q7Z4M0 266 aa9.75□□□□□ -0.85
USP4-205ENST00000431357 SAXO1Q8IYX7 474 aa9.75□□□□□ -0.85
USP4-205ENST00000431357 SLC35G3Q8N808 338 aa9.75□□□□□ -0.85
USP4-205ENST00000431357 OR8G5Q8NG78 346 aa9.75□□□□□ -0.85
USP4-205ENST00000431357 OR11L1Q8NGX0 322 aa9.75□□□□□ -0.85
USP4-205ENST00000431357 OR10D3Q8NH80 312 aa9.75□□□□□ -0.85
USP4-205ENST00000431357 TMEM45BQ96B21 275 aa9.75□□□□□ -0.85
USP4-205ENST00000431357 BOD1Q96IK1 185 aa9.75□□□□□ -0.85
USP4-205ENST00000431357 TMEM56Q96MV1 263 aa9.75□□□□□ -0.85
USP4-205ENST00000431357 TAAR9Q96RI9 348 aa9.75□□□□□ -0.85
USP4-205ENST00000431357 CLCC1Q96S66 551 aa9.75□□□□□ -0.85
USP4-205ENST00000431357 SLC25A31Q9H0C2 315 aa9.75□□□□□ -0.85
USP4-205ENST00000431357 TMEM222Q9H0R3 208 aa9.75□□□□□ -0.85
USP4-205ENST00000431357 SLC35B3Q9H1N7 401 aa9.75□□□□□ -0.85
USP4-205ENST00000431357 TMPRSS5Q9H3S3 457 aa9.75□□□□□ -0.85
USP4-205ENST00000431357 SPACA1Q9HBV2 294 aa9.75□□□□□ -0.85
USP4-205ENST00000431357 TMEM56-RWDD3S4R434 201 aa9.75□□□□□ -0.85
USP4-205ENST00000431357 MYO7BQ6PIF6 2116 aa9.75□□□□□ -0.85
USP4-205ENST00000431357 UMAD1C9J7I0 102 aa9.74□□□□□ -0.85
USP4-205ENST00000431357 CYTIPO60759 359 aa9.74□□□□□ -0.85
USP4-205ENST00000431357 OR7C1O76099 320 aaPredicted RBP9.74□□□□□ -0.85
USP4-205ENST00000431357 MMP7P09237 267 aaPredicted RBP9.74□□□□□ -0.85
USP4-205ENST00000431357 PATE4P0C8F1 98 aa9.74□□□□□ -0.85
USP4-205ENST00000431357 COX5BP10606 129 aa9.74□□□□□ -0.85
USP4-205ENST00000431357 CCL4P13236 92 aa9.74□□□□□ -0.85
USP4-205ENST00000431357 RAB1AP62820 205 aa9.74□□□□□ -0.85
USP4-205ENST00000431357 EWSR1Q01844 656 aaKnown RBP eCLIP9.74□□□□□ -0.85
USP4-205ENST00000431357 NHLH2Q02577 135 aa9.74□□□□□ -0.85
USP4-205ENST00000431357 AWAT1Q58HT5 328 aa9.74□□□□□ -0.85
USP4-205ENST00000431357 OR2C3Q8N628 320 aa9.74□□□□□ -0.85
USP4-205ENST00000431357 ZNF611Q8N823 705 aa9.74□□□□□ -0.85
USP4-205ENST00000431357 C2CD4CQ8TF44 421 aa9.74□□□□□ -0.85
USP4-205ENST00000431357 TP53RKQ96S44 253 aa9.74□□□□□ -0.85
USP4-205ENST00000431357 PARP12Q9H0J9 701 aaKnown RBP9.74□□□□□ -0.85
USP4-205ENST00000431357 C11orf1Q9H5F2 150 aa9.74□□□□□ -0.85
USP4-205ENST00000431357 KCNJ16Q9NPI9 418 aa9.74□□□□□ -0.85
USP4-205ENST00000431357 FSCN3Q9NQT6 498 aa9.74□□□□□ -0.85
USP4-205ENST00000431357 UBE2J1Q9Y385 318 aaPredicted RBP9.74□□□□□ -0.85
USP4-205ENST00000431357 TMEM265A0A087WTH1 108 aa9.74□□□□□ -0.85
USP4-205ENST00000431357 CCDC85CA6NKD9 419 aa9.74□□□□□ -0.85
USP4-205ENST00000431357 K7N7A8 449 aa9.74□□□□□ -0.85
USP4-205ENST00000431357 ZNF205O95201 554 aa9.74□□□□□ -0.85
USP4-205ENST00000431357 SNRNP70P08621 437 aaKnown RBP9.74□□□□□ -0.85
USP4-205ENST00000431357 MMP9P14780 707 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms