RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 TRAV24A0A0B4J272 114 aa11.9□□□□□ -0.5
HOXC4-202ENST00000430889 IGKV1-6A0A0C4DH72 117 aa11.9□□□□□ -0.5
HOXC4-202ENST00000430889 J3QT63 122 aa11.9□□□□□ -0.5
HOXC4-202ENST00000430889 DEDDO75618 318 aa11.9□□□□□ -0.5
HOXC4-202ENST00000430889 HKR1P10072 659 aa11.9□□□□□ -0.5
HOXC4-202ENST00000430889 TPT1P13693 172 aaKnown RBP11.9□□□□□ -0.5
HOXC4-202ENST00000430889 HOXB1P14653 301 aaPredicted RBP11.9□□□□□ -0.5
HOXC4-202ENST00000430889 KIR2DL2P43627 348 aaPredicted RBP11.9□□□□□ -0.5
HOXC4-202ENST00000430889 FXYD4P59646 89 aa11.9□□□□□ -0.5
HOXC4-202ENST00000430889 FAM209AQ5JX71 171 aa11.9□□□□□ -0.5
HOXC4-202ENST00000430889 FAM219AQ8IW50 185 aa11.9□□□□□ -0.5
HOXC4-202ENST00000430889 BAP18Q8IXM2 172 aa11.9□□□□□ -0.5
HOXC4-202ENST00000430889 OR11L1Q8NGX0 322 aa11.9□□□□□ -0.5
HOXC4-202ENST00000430889 MRPL30Q8TCC3 161 aaKnown RBP11.9□□□□□ -0.5
HOXC4-202ENST00000430889 ZNF488Q96MN9 340 aa11.9□□□□□ -0.5
HOXC4-202ENST00000430889 RHOFQ9HBH0 211 aa11.9□□□□□ -0.5
HOXC4-202ENST00000430889 SPACA1Q9HBV2 294 aa11.9□□□□□ -0.5
HOXC4-202ENST00000430889 KCNIP3Q9Y2W7 256 aa11.9□□□□□ -0.5
HOXC4-202ENST00000430889 KRBOX1C9JBD0 128 aa11.89□□□□□ -0.51
HOXC4-202ENST00000430889 PRKACAP17612 351 aa11.89□□□□□ -0.51
HOXC4-202ENST00000430889 M6PRP20645 277 aa11.89□□□□□ -0.51
HOXC4-202ENST00000430889 CA6P23280 308 aa11.89□□□□□ -0.51
HOXC4-202ENST00000430889 ERVK11-1P61568 191 aa11.89□□□□□ -0.51
HOXC4-202ENST00000430889 TGFBR3Q03167 851 aa11.89□□□□□ -0.51
HOXC4-202ENST00000430889 SP6Q3SY56 376 aa11.89□□□□□ -0.51
HOXC4-202ENST00000430889 ABCA11PQ4W5N1 156 aa11.89□□□□□ -0.51
HOXC4-202ENST00000430889 PHLDA2Q53GA4 152 aa11.89□□□□□ -0.51
HOXC4-202ENST00000430889 Q6P435 159 aa11.89□□□□□ -0.51
HOXC4-202ENST00000430889 INO80CQ6PI98 192 aaPredicted RBP11.89□□□□□ -0.51
HOXC4-202ENST00000430889 C5orf24Q7Z6I8 188 aa11.89□□□□□ -0.51
HOXC4-202ENST00000430889 GCNT2Q8N0V5 402 aa11.89□□□□□ -0.51
HOXC4-202ENST00000430889 FAM58AQ8N1B3 248 aa11.89□□□□□ -0.51
HOXC4-202ENST00000430889 C9orf106Q8NAJ2 232 aa11.89□□□□□ -0.51
HOXC4-202ENST00000430889 SUMF2Q8NBJ7 301 aa11.89□□□□□ -0.51
HOXC4-202ENST00000430889 LHFPL5Q8TAF8 219 aa11.89□□□□□ -0.51
HOXC4-202ENST00000430889 TRIB1Q96RU8 372 aa11.89□□□□□ -0.51
HOXC4-202ENST00000430889 OR51B6Q9H340 312 aa11.89□□□□□ -0.51
HOXC4-202ENST00000430889 RIMS4Q9H426 269 aaPredicted RBP11.89□□□□□ -0.51
HOXC4-202ENST00000430889 ATP23Q9Y6H3 246 aa11.89□□□□□ -0.51
HOXC4-202ENST00000430889 A0A1B0GW55 424 aa11.88□□□□□ -0.51
HOXC4-202ENST00000430889 TRDCB7Z8K6 153 aa11.88□□□□□ -0.51
HOXC4-202ENST00000430889 TEX46H3BTG2 121 aa11.88□□□□□ -0.51
HOXC4-202ENST00000430889 RHBDL1O75783 438 aa11.88□□□□□ -0.51
HOXC4-202ENST00000430889 SCO1O75880 301 aa11.88□□□□□ -0.51
HOXC4-202ENST00000430889 IFNA21P01568 189 aa11.88□□□□□ -0.51
HOXC4-202ENST00000430889 SCTP09683 121 aa11.88□□□□□ -0.51
HOXC4-202ENST00000430889 DUX4L2P0CJ85 424 aa11.88□□□□□ -0.51
HOXC4-202ENST00000430889 DUX4L3P0CJ86 424 aa11.88□□□□□ -0.51
HOXC4-202ENST00000430889 DUX4L4P0CJ87 422 aa11.88□□□□□ -0.51
HOXC4-202ENST00000430889 DUX4L5P0CJ88 424 aa11.88□□□□□ -0.51
HOXC4-202ENST00000430889 DUX4L6P0CJ89 424 aa11.88□□□□□ -0.51
HOXC4-202ENST00000430889 DUX4L7P0CJ90 424 aa11.88□□□□□ -0.51
HOXC4-202ENST00000430889 GNRHRP30968 328 aa11.88□□□□□ -0.51
HOXC4-202ENST00000430889 HERV-K104P61576 105 aa11.88□□□□□ -0.51
HOXC4-202ENST00000430889 PPP1CBP62140 327 aa11.88□□□□□ -0.51
HOXC4-202ENST00000430889 TSC22D1Q15714 1073 aa11.88□□□□□ -0.51
HOXC4-202ENST00000430889 SPATA46Q5T0L3 261 aa11.88□□□□□ -0.51
HOXC4-202ENST00000430889 PCSK4Q6UW60 755 aa11.88□□□□□ -0.51
HOXC4-202ENST00000430889 FAM185AQ8N0U4 392 aa11.88□□□□□ -0.51
HOXC4-202ENST00000430889 CCDC71LQ8N9Z2 235 aa11.88□□□□□ -0.51
HOXC4-202ENST00000430889 WDR31Q8NA23 367 aa11.88□□□□□ -0.51
HOXC4-202ENST00000430889 C1orf162Q8NEQ5 155 aaPredicted RBP11.88□□□□□ -0.51
HOXC4-202ENST00000430889 WNT2BQ93097 391 aa11.88□□□□□ -0.51
HOXC4-202ENST00000430889 GSKIPQ9P0R6 139 aa11.88□□□□□ -0.51
HOXC4-202ENST00000430889 DUX4Q9UBX2 424 aa11.88□□□□□ -0.51
HOXC4-202ENST00000430889 SESN1Q9Y6P5 492 aa11.88□□□□□ -0.51
HOXC4-202ENST00000430889 LRP5LA4QPB2 252 aa11.87□□□□□ -0.51
HOXC4-202ENST00000430889 IQCF6A8MYZ5 107 aa11.87□□□□□ -0.51
HOXC4-202ENST00000430889 LGALS8O00214 317 aa11.87□□□□□ -0.51
HOXC4-202ENST00000430889 MPPED1O15442 326 aa11.87□□□□□ -0.51
HOXC4-202ENST00000430889 LYZL6O75951 148 aa11.87□□□□□ -0.51
HOXC4-202ENST00000430889 IGKV3-15P01624 115 aa11.87□□□□□ -0.51
HOXC4-202ENST00000430889 FAM157CP0CG43 387 aa11.87□□□□□ -0.51
HOXC4-202ENST00000430889 DUSP1P28562 367 aa11.87□□□□□ -0.51
HOXC4-202ENST00000430889 NUP62P37198 522 aaPredicted RBP11.87□□□□□ -0.51
HOXC4-202ENST00000430889 IDH3GP51553 393 aaPredicted RBP11.87□□□□□ -0.51
HOXC4-202ENST00000430889 S100A10P60903 97 aa11.87□□□□□ -0.51
HOXC4-202ENST00000430889 IGFBP7Q16270 282 aa11.87□□□□□ -0.51
HOXC4-202ENST00000430889 TUSC1Q2TAM9 212 aa11.87□□□□□ -0.51
HOXC4-202ENST00000430889 C20orf204Q6ZNR8 217 aa11.87□□□□□ -0.51
HOXC4-202ENST00000430889 LYZL2Q7Z4W2 148 aa11.87□□□□□ -0.51
HOXC4-202ENST00000430889 LGI3Q8N145 548 aa11.87□□□□□ -0.51
HOXC4-202ENST00000430889 CCDC120Q96HB5 630 aa11.87□□□□□ -0.51
HOXC4-202ENST00000430889 TP53RKQ96S44 253 aa11.87□□□□□ -0.51
HOXC4-202ENST00000430889 SYT3Q9BQG1 590 aa11.87□□□□□ -0.51
HOXC4-202ENST00000430889 AMDHD2Q9Y303 409 aa11.87□□□□□ -0.51
HOXC4-202ENST00000430889 IGKV1D-13A0A0B4J2D9 117 aa11.87□□□□□ -0.51
HOXC4-202ENST00000430889 KIR2DS1A0A191URI9 304 aa11.87□□□□□ -0.51
HOXC4-202ENST00000430889 ZNF891A8MT65 544 aaPredicted RBP11.87□□□□□ -0.51
HOXC4-202ENST00000430889 PRR33A8MZF0 331 aa11.87□□□□□ -0.51
HOXC4-202ENST00000430889 K7EPK0 472 aa11.87□□□□□ -0.51
HOXC4-202ENST00000430889 TAAR5O14804 337 aa11.87□□□□□ -0.51
HOXC4-202ENST00000430889 TM4SF5O14894 197 aa11.87□□□□□ -0.51
HOXC4-202ENST00000430889 MBPP02686 304 aaPredicted RBP11.87□□□□□ -0.51
HOXC4-202ENST00000430889 IGKV1-13P0DP09 117 aa11.87□□□□□ -0.51
HOXC4-202ENST00000430889 RAC2P15153 192 aa11.87□□□□□ -0.51
HOXC4-202ENST00000430889 CBR1P16152 277 aa11.87□□□□□ -0.51
HOXC4-202ENST00000430889 IL32P24001 234 aa11.87□□□□□ -0.51
HOXC4-202ENST00000430889 KIR2DS4P43632 304 aa11.87□□□□□ -0.51
HOXC4-202ENST00000430889 UBE2NP61088 152 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms