RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 IGHV5-10-1A0A0J9YXX1 117 aa12.97□□□□□ -0.33
LINC00839-202ENST00000429940 CDRT15L2A8MXV6 281 aa12.97□□□□□ -0.33
LINC00839-202ENST00000429940 TRDCB7Z8K6 153 aa12.97□□□□□ -0.33
LINC00839-202ENST00000429940 PPIHO43447 177 aaKnown RBP12.97□□□□□ -0.33
LINC00839-202ENST00000429940 ZIC3O60481 467 aa12.97□□□□□ -0.33
LINC00839-202ENST00000429940 PITX3O75364 302 aa12.97□□□□□ -0.33
LINC00839-202ENST00000429940 ONECUT2O95948 504 aa12.97□□□□□ -0.33
LINC00839-202ENST00000429940 OMGP23515 440 aa12.97□□□□□ -0.33
LINC00839-202ENST00000429940 NKX2-1P43699 371 aaPredicted RBP12.97□□□□□ -0.33
LINC00839-202ENST00000429940 SRPXP78539 464 aa12.97□□□□□ -0.33
LINC00839-202ENST00000429940 PCOLCEQ15113 449 aa12.97□□□□□ -0.33
LINC00839-202ENST00000429940 ACER2Q5QJU3 275 aa12.97□□□□□ -0.33
LINC00839-202ENST00000429940 TMEM42Q69YG0 159 aa12.97□□□□□ -0.33
LINC00839-202ENST00000429940 AKR7LQ8NHP1 331 aa12.97□□□□□ -0.33
LINC00839-202ENST00000429940 TMPRSS5Q9H3S3 457 aa12.97□□□□□ -0.33
LINC00839-202ENST00000429940 IL36GQ9NZH8 169 aa12.97□□□□□ -0.33
LINC00839-202ENST00000429940 A0A0J9YW62 118 aa12.97□□□□□ -0.33
LINC00839-202ENST00000429940 SSSCA1O60232 199 aa12.97□□□□□ -0.33
LINC00839-202ENST00000429940 OR8B8Q15620 311 aa12.97□□□□□ -0.33
LINC00839-202ENST00000429940 HIKESHIQ53FT3 197 aa12.97□□□□□ -0.33
LINC00839-202ENST00000429940 TMEM211Q6ICI0 200 aa12.97□□□□□ -0.33
LINC00839-202ENST00000429940 SRXN1Q9BYN0 137 aa12.97□□□□□ -0.33
LINC00839-202ENST00000429940 TMEM222Q9H0R3 208 aa12.97□□□□□ -0.33
LINC00839-202ENST00000429940 ARRDC1-AS1Q9H2J1 176 aa12.97□□□□□ -0.33
LINC00839-202ENST00000429940 CRLF2Q9HC73 371 aa12.97□□□□□ -0.33
LINC00839-202ENST00000429940 SLC7A11Q9UPY5 501 aa12.97□□□□□ -0.33
LINC00839-202ENST00000429940 CELSR3Q9NYQ7 3312 aa12.96□□□□□ -0.33
LINC00839-202ENST00000429940 A0A1W2PQM1 296 aa12.96□□□□□ -0.33
LINC00839-202ENST00000429940 ZNF724A8MTY0 619 aa12.96□□□□□ -0.33
LINC00839-202ENST00000429940 CST2P09228 141 aa12.96□□□□□ -0.33
LINC00839-202ENST00000429940 PATE4P0C8F1 98 aa12.96□□□□□ -0.33
LINC00839-202ENST00000429940 ZNF32P17041 273 aa12.96□□□□□ -0.33
LINC00839-202ENST00000429940 RPS10P46783 165 aaKnown RBP12.96□□□□□ -0.33
LINC00839-202ENST00000429940 HTR5AP47898 357 aa12.96□□□□□ -0.33
LINC00839-202ENST00000429940 FUT6P51993 359 aa12.96□□□□□ -0.33
LINC00839-202ENST00000429940 CEBPGP53567 150 aa12.96□□□□□ -0.33
LINC00839-202ENST00000429940 RBM11P57052 281 aaKnown RBP12.96□□□□□ -0.33
LINC00839-202ENST00000429940 CCL7P80098 99 aa12.96□□□□□ -0.33
LINC00839-202ENST00000429940 IGSF11Q5DX21 431 aa12.96□□□□□ -0.33
LINC00839-202ENST00000429940 PLCXD3Q63HM9 321 aa12.96□□□□□ -0.33
LINC00839-202ENST00000429940 MRPL14Q6P1L8 145 aaKnown RBP12.96□□□□□ -0.33
LINC00839-202ENST00000429940 SPSB3Q6PJ21 355 aa12.96□□□□□ -0.33
LINC00839-202ENST00000429940 ZNF695Q8IW36 515 aa12.96□□□□□ -0.33
LINC00839-202ENST00000429940 MUCL1Q96DR8 90 aa12.96□□□□□ -0.33
LINC00839-202ENST00000429940 CCDC74BQ96LY2 380 aa12.96□□□□□ -0.33
LINC00839-202ENST00000429940 PAPOLGQ9BWT3 736 aaKnown RBP12.96□□□□□ -0.33
LINC00839-202ENST00000429940 ZNF700Q9H0M5 742 aa12.96□□□□□ -0.33
LINC00839-202ENST00000429940 PLEKHF2Q9H8W4 249 aa12.96□□□□□ -0.33
LINC00839-202ENST00000429940 UNKLQ9H9P5 680 aaKnown RBP12.96□□□□□ -0.33
LINC00839-202ENST00000429940 UBE2J1Q9Y385 318 aaPredicted RBP12.96□□□□□ -0.33
LINC00839-202ENST00000429940 H3BQ15 152 aa12.96□□□□□ -0.34
LINC00839-202ENST00000429940 IGHV2-70P01814 119 aa12.96□□□□□ -0.34
LINC00839-202ENST00000429940 B4GALT1P15291 398 aa12.96□□□□□ -0.34
LINC00839-202ENST00000429940 RND3P61587 244 aa12.96□□□□□ -0.34
LINC00839-202ENST00000429940 KIAA0141Q14154 515 aaPredicted RBP12.96□□□□□ -0.34
LINC00839-202ENST00000429940 DPPA2Q7Z7J5 298 aa12.96□□□□□ -0.34
LINC00839-202ENST00000429940 TBC1D26Q86UD7 250 aa12.96□□□□□ -0.34
LINC00839-202ENST00000429940 FAM185AQ8N0U4 392 aa12.96□□□□□ -0.34
LINC00839-202ENST00000429940 OR8G5Q8NG78 346 aa12.96□□□□□ -0.34
LINC00839-202ENST00000429940 SAP25Q8TEE9 199 aa12.96□□□□□ -0.34
LINC00839-202ENST00000429940 TMEM171Q8WVE6 324 aa12.96□□□□□ -0.34
LINC00839-202ENST00000429940 MR1Q95460 341 aa12.96□□□□□ -0.34
LINC00839-202ENST00000429940 MAGT1Q9H0U3 335 aa12.96□□□□□ -0.34
LINC00839-202ENST00000429940 TMEM38BQ9NVV0 291 aa12.96□□□□□ -0.34
LINC00839-202ENST00000429940 KMT2EQ8IZD2 1858 aa12.95□□□□□ -0.34
LINC00839-202ENST00000429940 OR6C6A6NF89 314 aa12.95□□□□□ -0.34
LINC00839-202ENST00000429940 HSPA12AO43301 675 aa12.95□□□□□ -0.34
LINC00839-202ENST00000429940 OR7C1O76099 320 aaPredicted RBP12.95□□□□□ -0.34
LINC00839-202ENST00000429940 FUT3P21217 361 aa12.95□□□□□ -0.34
LINC00839-202ENST00000429940 GNRHRP30968 328 aa12.95□□□□□ -0.34
LINC00839-202ENST00000429940 VAMP2P63027 116 aa12.95□□□□□ -0.34
LINC00839-202ENST00000429940 HAGHQ16775 308 aa12.95□□□□□ -0.34
LINC00839-202ENST00000429940 SPIN3Q5JUX0 258 aa12.95□□□□□ -0.34
LINC00839-202ENST00000429940 BATF2Q8N1L9 274 aa12.95□□□□□ -0.34
LINC00839-202ENST00000429940 EDARADDQ8WWZ3 215 aa12.95□□□□□ -0.34
LINC00839-202ENST00000429940 PIGCQ92535 297 aa12.95□□□□□ -0.34
LINC00839-202ENST00000429940 RAB39BQ96DA2 213 aa12.95□□□□□ -0.34
LINC00839-202ENST00000429940 SPIN2AQ99865 258 aa12.95□□□□□ -0.34
LINC00839-202ENST00000429940 SPIN2BQ9BPZ2 258 aa12.95□□□□□ -0.34
LINC00839-202ENST00000429940 SLC25A31Q9H0C2 315 aa12.95□□□□□ -0.34
LINC00839-202ENST00000429940 PROK2Q9HC23 129 aa12.95□□□□□ -0.34
LINC00839-202ENST00000429940 LYRM2Q9NU23 88 aaPredicted RBP12.95□□□□□ -0.34
LINC00839-202ENST00000429940 P4HTMQ9NXG6 502 aa12.95□□□□□ -0.34
LINC00839-202ENST00000429940 MMP24Q9Y5R2 645 aa12.95□□□□□ -0.34
LINC00839-202ENST00000429940 ASCC3Q8N3C0 2202 aaKnown RBP12.95□□□□□ -0.34
LINC00839-202ENST00000429940 FREM2Q5SZK8 3169 aa12.95□□□□□ -0.34
LINC00839-202ENST00000429940 hCG_38984A0A1B0GV85 526 aa12.95□□□□□ -0.34
LINC00839-202ENST00000429940 BTBD17A6NE02 478 aa12.95□□□□□ -0.34
LINC00839-202ENST00000429940 ZNF727A8MUV8 499 aa12.95□□□□□ -0.34
LINC00839-202ENST00000429940 EPHA8P29322 1005 aaPredicted RBP12.95□□□□□ -0.34
LINC00839-202ENST00000429940 TAGLN2P37802 199 aaKnown RBP12.95□□□□□ -0.34
LINC00839-202ENST00000429940 RAC1P63000 192 aa12.95□□□□□ -0.34
LINC00839-202ENST00000429940 ZNF92Q03936 586 aa12.95□□□□□ -0.34
LINC00839-202ENST00000429940 ZNF100Q8IYN0 542 aa12.95□□□□□ -0.34
LINC00839-202ENST00000429940 TMEM252Q8N6L7 170 aa12.95□□□□□ -0.34
LINC00839-202ENST00000429940 OR5C1Q8NGR4 320 aa12.95□□□□□ -0.34
LINC00839-202ENST00000429940 ALKBH3Q96Q83 286 aaPredicted RBP12.95□□□□□ -0.34
LINC00839-202ENST00000429940 TOLLIPQ9H0E2 274 aa12.95□□□□□ -0.34
LINC00839-202ENST00000429940 PLSCR2Q9NRY7 297 aa12.95□□□□□ -0.34
LINC00839-202ENST00000429940 KIAA1456Q9P272 454 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms