RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 ODAMA1E959 279 aa11.89□□□□□ -0.51
MSH5-208ENST00000429846 ZNF729A6NN14 1252 aaPredicted RBP11.89□□□□□ -0.51
MSH5-208ENST00000429846 BUB1B-PAK6H3BSN5 160 aa11.89□□□□□ -0.51
MSH5-208ENST00000429846 TOR1AO14656 332 aa11.89□□□□□ -0.51
MSH5-208ENST00000429846 CLIC3O95833 236 aa11.89□□□□□ -0.51
MSH5-208ENST00000429846 IGKV1D-12P01611 117 aa11.89□□□□□ -0.51
MSH5-208ENST00000429846 LPLP06858 475 aa11.89□□□□□ -0.51
MSH5-208ENST00000429846 CALCBP10092 127 aa11.89□□□□□ -0.51
MSH5-208ENST00000429846 MNDAP41218 407 aa11.89□□□□□ -0.51
MSH5-208ENST00000429846 GLIPR1P48060 266 aa11.89□□□□□ -0.51
MSH5-208ENST00000429846 PRRX1P54821 245 aa11.89□□□□□ -0.51
MSH5-208ENST00000429846 NANOS3P60323 173 aaKnown RBP11.89□□□□□ -0.51
MSH5-208ENST00000429846 AESQ08117 197 aa11.89□□□□□ -0.51
MSH5-208ENST00000429846 KPNB1Q14974 876 aaKnown RBP11.89□□□□□ -0.51
MSH5-208ENST00000429846 ABCA11PQ4W5N1 156 aa11.89□□□□□ -0.51
MSH5-208ENST00000429846 MEDAGQ5VYS4 303 aa11.89□□□□□ -0.51
MSH5-208ENST00000429846 OR13C3Q8NGS6 347 aa11.89□□□□□ -0.51
MSH5-208ENST00000429846 OR13C9Q8NGT0 318 aa11.89□□□□□ -0.51
MSH5-208ENST00000429846 MRPL48Q96GC5 212 aaKnown RBP11.89□□□□□ -0.51
MSH5-208ENST00000429846 PCDHB16Q9NRJ7 776 aa11.89□□□□□ -0.51
MSH5-208ENST00000429846 OR6C3Q9NZP0 311 aa11.89□□□□□ -0.51
MSH5-208ENST00000429846 SNTNA6NMZ2 147 aa11.88□□□□□ -0.51
MSH5-208ENST00000429846 J3QRE1 110 aa11.88□□□□□ -0.51
MSH5-208ENST00000429846 ATP5HO75947 161 aa11.88□□□□□ -0.51
MSH5-208ENST00000429846 DBTP11182 482 aaKnown RBP11.88□□□□□ -0.51
MSH5-208ENST00000429846 IGLL1P15814 213 aa11.88□□□□□ -0.51
MSH5-208ENST00000429846 TCTEX1D4Q5JR98 221 aa11.88□□□□□ -0.51
MSH5-208ENST00000429846 KRBOX4Q5JUW0 171 aa11.88□□□□□ -0.51
MSH5-208ENST00000429846 TPTE2P1Q5T6R2 138 aa11.88□□□□□ -0.51
MSH5-208ENST00000429846 BAIAP2L2Q6UXY1 529 aa11.88□□□□□ -0.51
MSH5-208ENST00000429846 OR51A4Q8NGJ6 313 aa11.88□□□□□ -0.51
MSH5-208ENST00000429846 OR5D18Q8NGL1 313 aa11.88□□□□□ -0.51
MSH5-208ENST00000429846 MYDGFQ969H8 173 aa11.88□□□□□ -0.51
MSH5-208ENST00000429846 RFT1Q96AA3 541 aa11.88□□□□□ -0.51
MSH5-208ENST00000429846 COQ2Q96H96 371 aa11.88□□□□□ -0.51
MSH5-208ENST00000429846 HRASLS5Q96KN8 279 aa11.88□□□□□ -0.51
MSH5-208ENST00000429846 ZNF286AQ9HBT8 521 aa11.88□□□□□ -0.51
MSH5-208ENST00000429846 ORC6Q9Y5N6 252 aa11.88□□□□□ -0.51
MSH5-208ENST00000429846 FAM172BPA6NC97 362 aa11.87□□□□□ -0.51
MSH5-208ENST00000429846 SLC33A1O00400 549 aaPredicted RBP11.87□□□□□ -0.51
MSH5-208ENST00000429846 CD24P25063 80 aa11.87□□□□□ -0.51
MSH5-208ENST00000429846 SNRPGP62308 76 aaKnown RBP11.87□□□□□ -0.51
MSH5-208ENST00000429846 ATXN7L3Q14CW9 347 aaPredicted RBP11.87□□□□□ -0.51
MSH5-208ENST00000429846 CCDC121Q6ZUS5 278 aa11.87□□□□□ -0.51
MSH5-208ENST00000429846 ACBD7Q8N6N7 88 aa11.87□□□□□ -0.51
MSH5-208ENST00000429846 OR10AC1Q8NH08 325 aa11.87□□□□□ -0.51
MSH5-208ENST00000429846 OR9G1Q8NH87 305 aa11.87□□□□□ -0.51
MSH5-208ENST00000429846 RNFT2Q96EX2 444 aa11.87□□□□□ -0.51
MSH5-208ENST00000429846 PELI1Q96FA3 418 aa11.87□□□□□ -0.51
MSH5-208ENST00000429846 CPNE2Q96FN4 548 aaPredicted RBP11.87□□□□□ -0.51
MSH5-208ENST00000429846 SPACA5Q96QH8 159 aa11.87□□□□□ -0.51
MSH5-208ENST00000429846 ZCCHC4Q9H5U6 513 aa11.87□□□□□ -0.51
MSH5-208ENST00000429846 AMMECR1Q9Y4X0 333 aaPredicted RBP11.87□□□□□ -0.51
MSH5-208ENST00000429846 SAC3D1A6NKF1 404 aa11.86□□□□□ -0.51
MSH5-208ENST00000429846 OR4C45A6NMZ5 311 aa11.86□□□□□ -0.51
MSH5-208ENST00000429846 LY6LH3BQJ8 138 aa11.86□□□□□ -0.51
MSH5-208ENST00000429846 SULT1B1O43704 296 aa11.86□□□□□ -0.51
MSH5-208ENST00000429846 AMY1AP04745 511 aa11.86□□□□□ -0.51
MSH5-208ENST00000429846 AMY2AP04746 511 aa11.86□□□□□ -0.51
MSH5-208ENST00000429846 ALPLP05186 524 aa11.86□□□□□ -0.51
MSH5-208ENST00000429846 HCKP08631 526 aa11.86□□□□□ -0.51
MSH5-208ENST00000429846 FAM106CPP0CH98 169 aa11.86□□□□□ -0.51
MSH5-208ENST00000429846 GDNFP39905 211 aa11.86□□□□□ -0.51
MSH5-208ENST00000429846 MTNR1BP49286 362 aa11.86□□□□□ -0.51
MSH5-208ENST00000429846 SCN1BQ07699 218 aa11.86□□□□□ -0.51
MSH5-208ENST00000429846 ALKBH1Q13686 389 aaKnown RBP11.86□□□□□ -0.51
MSH5-208ENST00000429846 C17orf58Q2M2W7 97 aa11.86□□□□□ -0.51
MSH5-208ENST00000429846 Q6P435 159 aa11.86□□□□□ -0.51
MSH5-208ENST00000429846 THNSL2Q86YJ6 484 aa11.86□□□□□ -0.51
MSH5-208ENST00000429846 OSR2Q8N2R0 312 aa11.86□□□□□ -0.51
MSH5-208ENST00000429846 OR5D14Q8NGL3 314 aa11.86□□□□□ -0.51
MSH5-208ENST00000429846 KIRREL1Q96J84 757 aa11.86□□□□□ -0.51
MSH5-208ENST00000429846 C4orf36Q96KX1 117 aa11.86□□□□□ -0.51
MSH5-208ENST00000429846 GPR61Q9BZJ8 451 aa11.86□□□□□ -0.51
MSH5-208ENST00000429846 NCOR1P1Q9H4R4 102 aa11.86□□□□□ -0.51
MSH5-208ENST00000429846 MYRFQ9Y2G1 1151 aa11.86□□□□□ -0.51
MSH5-208ENST00000429846 MOB4Q9Y3A3 225 aa11.86□□□□□ -0.51
MSH5-208ENST00000429846 HSPE1-MOB4S4R3N1 261 aa11.86□□□□□ -0.51
MSH5-208ENST00000429846 KBTBD11-OT1A0A1B0GTJ5 212 aa11.85□□□□□ -0.51
MSH5-208ENST00000429846 TMEM212A6NML5 194 aa11.85□□□□□ -0.51
MSH5-208ENST00000429846 J3QLW9 94 aa11.85□□□□□ -0.51
MSH5-208ENST00000429846 DYNC1I1O14576 645 aa11.85□□□□□ -0.51
MSH5-208ENST00000429846 DEGS1O15121 323 aa11.85□□□□□ -0.51
MSH5-208ENST00000429846 CIB2O75838 187 aa11.85□□□□□ -0.51
MSH5-208ENST00000429846 MPIG6BO95866 241 aa11.85□□□□□ -0.51
MSH5-208ENST00000429846 TMEM225BP0DP42 221 aa11.85□□□□□ -0.51
MSH5-208ENST00000429846 ZNF19P17023 458 aa11.85□□□□□ -0.51
MSH5-208ENST00000429846 OR3A4PP47883 348 aa11.85□□□□□ -0.51
MSH5-208ENST00000429846 ZP1P60852 638 aa11.85□□□□□ -0.51
MSH5-208ENST00000429846 PAX5Q02548 391 aa11.85□□□□□ -0.51
MSH5-208ENST00000429846 MRPL28Q13084 256 aaKnown RBP11.85□□□□□ -0.51
MSH5-208ENST00000429846 RBM39Q14498 530 aaKnown RBP11.85□□□□□ -0.51
MSH5-208ENST00000429846 CDK5R1Q15078 307 aa11.85□□□□□ -0.51
MSH5-208ENST00000429846 KISS1Q15726 138 aa11.85□□□□□ -0.51
MSH5-208ENST00000429846 KHDC1LQ5JSQ8 128 aa11.85□□□□□ -0.51
MSH5-208ENST00000429846 ELP2Q6IA86 826 aa11.85□□□□□ -0.51
MSH5-208ENST00000429846 SERPINA12Q8IW75 414 aa11.85□□□□□ -0.51
MSH5-208ENST00000429846 SYS1Q8N2H4 156 aa11.85□□□□□ -0.51
MSH5-208ENST00000429846 PARP16Q8N5Y8 322 aa11.85□□□□□ -0.51
MSH5-208ENST00000429846 ZNF565Q8N9K5 539 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms