RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 LEUTXA8MZ59 168 aa13.13□□□□□ -0.31
VARS-216ENST00000428445 LY6LH3BQJ8 138 aa13.13□□□□□ -0.31
VARS-216ENST00000428445 BUB1B-PAK6H3BSN5 160 aa13.13□□□□□ -0.31
VARS-216ENST00000428445 SH2D1BO14796 132 aa13.13□□□□□ -0.31
VARS-216ENST00000428445 ISG15P05161 165 aa13.13□□□□□ -0.31
VARS-216ENST00000428445 RPSAP08865 295 aaKnown RBP13.13□□□□□ -0.31
VARS-216ENST00000428445 LMO1P25800 156 aa13.13□□□□□ -0.31
VARS-216ENST00000428445 ISL1P61371 349 aa13.13□□□□□ -0.31
VARS-216ENST00000428445 EGFEM1PQ0D2K5 195 aa13.13□□□□□ -0.31
VARS-216ENST00000428445 PDZK1IP1Q13113 114 aa13.13□□□□□ -0.31
VARS-216ENST00000428445 HEPN1Q6WQI6 88 aa13.13□□□□□ -0.31
VARS-216ENST00000428445 LHFPL2Q6ZUX7 228 aa13.13□□□□□ -0.31
VARS-216ENST00000428445 OR10AC1Q8NH08 325 aa13.13□□□□□ -0.31
VARS-216ENST00000428445 ZNF596Q8TC21 504 aa13.13□□□□□ -0.31
VARS-216ENST00000428445 LEAP2Q969E1 77 aa13.13□□□□□ -0.31
VARS-216ENST00000428445 SPSB1Q96BD6 273 aa13.13□□□□□ -0.31
VARS-216ENST00000428445 COQ2Q96H96 371 aa13.13□□□□□ -0.31
VARS-216ENST00000428445 MYCBPQ99417 103 aaPredicted RBP13.13□□□□□ -0.31
VARS-216ENST00000428445 EXOSC4Q9NPD3 245 aaKnown RBP13.13□□□□□ -0.31
VARS-216ENST00000428445 TAS2R3Q9NYW6 316 aa13.13□□□□□ -0.31
VARS-216ENST00000428445 TOR1AO14656 332 aa13.12□□□□□ -0.31
VARS-216ENST00000428445 NFYBP25208 207 aa13.12□□□□□ -0.31
VARS-216ENST00000428445 CD69Q07108 199 aa13.12□□□□□ -0.31
VARS-216ENST00000428445 DIAPH2-AS1Q14236 149 aa13.12□□□□□ -0.31
VARS-216ENST00000428445 C17orf58Q2M2W7 97 aa13.12□□□□□ -0.31
VARS-216ENST00000428445 HLA-DRB5Q30154 266 aa13.12□□□□□ -0.31
VARS-216ENST00000428445 Q6P435 159 aa13.12□□□□□ -0.31
VARS-216ENST00000428445 FDX2Q6P4F2 183 aa13.12□□□□□ -0.31
VARS-216ENST00000428445 FAM220AQ7Z4H9 259 aa13.12□□□□□ -0.31
VARS-216ENST00000428445 AMIGO2Q86SJ2 522 aa13.12□□□□□ -0.31
VARS-216ENST00000428445 DUX3Q96PT4 197 aa13.12□□□□□ -0.31
VARS-216ENST00000428445 PPIL3Q9H2H8 161 aaKnown RBP13.12□□□□□ -0.31
VARS-216ENST00000428445 GAL3ST2Q9H3Q3 398 aa13.12□□□□□ -0.31
VARS-216ENST00000428445 NEK6Q9HC98 313 aa13.12□□□□□ -0.31
VARS-216ENST00000428445 PCDHGB5Q9Y5G0 923 aa13.12□□□□□ -0.31
VARS-216ENST00000428445 PSMB11A5LHX3 300 aa13.11□□□□□ -0.31
VARS-216ENST00000428445 ATP5HO75947 161 aa13.11□□□□□ -0.31
VARS-216ENST00000428445 MT-ND2P03891 347 aa13.11□□□□□ -0.31
VARS-216ENST00000428445 ZNF44P15621 663 aa13.11□□□□□ -0.31
VARS-216ENST00000428445 CCR9P51686 369 aa13.11□□□□□ -0.31
VARS-216ENST00000428445 NANOS3P60323 173 aaKnown RBP13.11□□□□□ -0.31
VARS-216ENST00000428445 HNF4GQ14541 408 aa13.11□□□□□ -0.31
VARS-216ENST00000428445 ATXN7L3Q14CW9 347 aaPredicted RBP13.11□□□□□ -0.31
VARS-216ENST00000428445 KRBOX4Q5JUW0 171 aa13.11□□□□□ -0.31
VARS-216ENST00000428445 SLC25A30Q5SVS4 291 aa13.11□□□□□ -0.31
VARS-216ENST00000428445 C8orf86Q6ZUL3 223 aa13.11□□□□□ -0.31
VARS-216ENST00000428445 OSR2Q8N2R0 312 aa13.11□□□□□ -0.31
VARS-216ENST00000428445 OR51A4Q8NGJ6 313 aa13.11□□□□□ -0.31
VARS-216ENST00000428445 EME1Q96AY2 570 aa13.11□□□□□ -0.31
VARS-216ENST00000428445 CIB1Q99828 191 aa13.11□□□□□ -0.31
VARS-216ENST00000428445 GABARAPL3Q9BY60 117 aa13.11□□□□□ -0.31
VARS-216ENST00000428445 FRRS1LQ9P0K9 344 aa13.11□□□□□ -0.31
VARS-216ENST00000428445 ODAMA1E959 279 aa13.1□□□□□ -0.31
VARS-216ENST00000428445 HSPB6O14558 160 aa13.1□□□□□ -0.31
VARS-216ENST00000428445 SNRNP70P08621 437 aaKnown RBP13.1□□□□□ -0.31
VARS-216ENST00000428445 CD34P28906 385 aa13.1□□□□□ -0.31
VARS-216ENST00000428445 THBS3P49746 956 aa13.1□□□□□ -0.31
VARS-216ENST00000428445 BNIP1Q12981 228 aa13.1□□□□□ -0.31
VARS-216ENST00000428445 LTC4SQ16873 150 aa13.1□□□□□ -0.31
VARS-216ENST00000428445 SAXO1Q8IYX7 474 aa13.1□□□□□ -0.31
VARS-216ENST00000428445 OR2G2Q8NGZ5 317 aa13.1□□□□□ -0.31
VARS-216ENST00000428445 RBMXL1Q96E39 390 aaKnown RBP13.1□□□□□ -0.31
VARS-216ENST00000428445 CENPNQ96H22 339 aaPredicted RBP13.1□□□□□ -0.31
VARS-216ENST00000428445 OPALINQ96PE5 141 aa13.1□□□□□ -0.31
VARS-216ENST00000428445 MBOAT4Q96T53 435 aa13.1□□□□□ -0.31
VARS-216ENST00000428445 TENM3Q9P273 2699 aa13.09□□□□□ -0.31
VARS-216ENST00000428445 LINC01548A6NM66 108 aa13.09□□□□□ -0.31
VARS-216ENST00000428445 OOSP1A8MZH6 123 aa13.09□□□□□ -0.31
VARS-216ENST00000428445 SLC33A1O00400 549 aaPredicted RBP13.09□□□□□ -0.31
VARS-216ENST00000428445 KDM4BO94953 1096 aa13.09□□□□□ -0.31
VARS-216ENST00000428445 DUS4LO95620 317 aaKnown RBP13.09□□□□□ -0.31
VARS-216ENST00000428445 CLIC3O95833 236 aa13.09□□□□□ -0.31
VARS-216ENST00000428445 CSN2P05814 226 aa13.09□□□□□ -0.31
VARS-216ENST00000428445 ZNF20P17024 532 aa13.09□□□□□ -0.31
VARS-216ENST00000428445 CEACAM3P40198 252 aa13.09□□□□□ -0.31
VARS-216ENST00000428445 PTGFRP43088 359 aa13.09□□□□□ -0.31
VARS-216ENST00000428445 PRRX1P54821 245 aa13.09□□□□□ -0.31
VARS-216ENST00000428445 RPL23AP62750 156 aaKnown RBP13.09□□□□□ -0.31
VARS-216ENST00000428445 MEDAGQ5VYS4 303 aa13.09□□□□□ -0.31
VARS-216ENST00000428445 CHST4Q8NCG5 386 aa13.09□□□□□ -0.31
VARS-216ENST00000428445 OR4D6Q8NGJ1 314 aa13.09□□□□□ -0.31
VARS-216ENST00000428445 OR56B4Q8NH76 319 aa13.09□□□□□ -0.31
VARS-216ENST00000428445 MRPL48Q96GC5 212 aaKnown RBP13.09□□□□□ -0.31
VARS-216ENST00000428445 B9D2Q9BPU9 175 aa13.09□□□□□ -0.31
VARS-216ENST00000428445 COMMD4Q9H0A8 199 aa13.09□□□□□ -0.31
VARS-216ENST00000428445 RIBC2Q9H4K1 309 aa13.09□□□□□ -0.31
VARS-216ENST00000428445 TRAV39A0A0B4J263 110 aa13.08□□□□□ -0.32
VARS-216ENST00000428445 FAM90A18PA6NE21 464 aa13.08□□□□□ -0.32
VARS-216ENST00000428445 FAM90A16PA6NEW6 464 aa13.08□□□□□ -0.32
VARS-216ENST00000428445 FAM90A20PA6NIJ5 464 aa13.08□□□□□ -0.32
VARS-216ENST00000428445 SNTNA6NMZ2 147 aa13.08□□□□□ -0.32
VARS-216ENST00000428445 FAM90A9PA6NNJ1 464 aa13.08□□□□□ -0.32
VARS-216ENST00000428445 FAM90A12PA8MX19 464 aa13.08□□□□□ -0.32
VARS-216ENST00000428445 FAM90A5PA8MXJ8 464 aa13.08□□□□□ -0.32
VARS-216ENST00000428445 M0QZK8 103 aa13.08□□□□□ -0.32
VARS-216ENST00000428445 DEGS1O15121 323 aa13.08□□□□□ -0.32
VARS-216ENST00000428445 FAM90A15PP0C7V4 464 aa13.08□□□□□ -0.32
VARS-216ENST00000428445 FAM90A13PP0C7W8 464 aa13.08□□□□□ -0.32
VARS-216ENST00000428445 FAM90A14PP0C7W9 464 aa13.08□□□□□ -0.32
VARS-216ENST00000428445 FAM90A24PP0C7X0 464 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms