RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 Q6ZSR3 168 aa11.52□□□□□ -0.57
PDAP1-202ENST00000426447 ZMAT4Q9H898 229 aa11.52□□□□□ -0.57
PDAP1-202ENST00000426447 H2AFY2Q9P0M6 372 aaPredicted RBP11.52□□□□□ -0.57
PDAP1-202ENST00000426447 SIRT4Q9Y6E7 314 aaPredicted RBP11.52□□□□□ -0.57
PDAP1-202ENST00000426447 A0A087X0M5 115 aa11.51□□□□□ -0.57
PDAP1-202ENST00000426447 A0A1B0GX30 115 aa11.51□□□□□ -0.57
PDAP1-202ENST00000426447 ODAMA1E959 279 aa11.51□□□□□ -0.57
PDAP1-202ENST00000426447 LINC01548A6NM66 108 aa11.51□□□□□ -0.57
PDAP1-202ENST00000426447 ZNF729A6NN14 1252 aaPredicted RBP11.51□□□□□ -0.57
PDAP1-202ENST00000426447 NCBP2LA6PVI3 153 aaKnown RBP11.51□□□□□ -0.57
PDAP1-202ENST00000426447 AP4M1O00189 453 aa11.51□□□□□ -0.57
PDAP1-202ENST00000426447 ZNF44P15621 663 aa11.51□□□□□ -0.57
PDAP1-202ENST00000426447 CCL1P22362 96 aa11.51□□□□□ -0.57
PDAP1-202ENST00000426447 CDX1P47902 265 aaPredicted RBP11.51□□□□□ -0.57
PDAP1-202ENST00000426447 GPR50Q13585 617 aa11.51□□□□□ -0.57
PDAP1-202ENST00000426447 KRBOX4Q5JUW0 171 aa11.51□□□□□ -0.57
PDAP1-202ENST00000426447 ZFAND6Q6FIF0 208 aa11.51□□□□□ -0.57
PDAP1-202ENST00000426447 SLC35F2Q8IXU6 374 aa11.51□□□□□ -0.57
PDAP1-202ENST00000426447 YIPF7Q8N8F6 280 aa11.51□□□□□ -0.57
PDAP1-202ENST00000426447 MNTQ99583 582 aa11.51□□□□□ -0.57
PDAP1-202ENST00000426447 CHST5Q9GZS9 411 aa11.51□□□□□ -0.57
PDAP1-202ENST00000426447 FAM107BQ9H098 131 aa11.51□□□□□ -0.57
PDAP1-202ENST00000426447 J3QR06 171 aa11.5□□□□□ -0.57
PDAP1-202ENST00000426447 IGKV1D-33P01593 117 aa11.5□□□□□ -0.57
PDAP1-202ENST00000426447 IGKV1-33P01594 117 aa11.5□□□□□ -0.57
PDAP1-202ENST00000426447 IGHV3-7P01780 117 aa11.5□□□□□ -0.57
PDAP1-202ENST00000426447 OCM2P0CE71 109 aa11.5□□□□□ -0.57
PDAP1-202ENST00000426447 OCMP0CE72 109 aaPredicted RBP11.5□□□□□ -0.57
PDAP1-202ENST00000426447 RAP2AP10114 183 aa11.5□□□□□ -0.57
PDAP1-202ENST00000426447 RAB7AP51149 207 aa11.5□□□□□ -0.57
PDAP1-202ENST00000426447 MNAT1P51948 309 aa11.5□□□□□ -0.57
PDAP1-202ENST00000426447 MADCAM1Q13477 382 aa11.5□□□□□ -0.57
PDAP1-202ENST00000426447 UTF1Q5T230 341 aa11.5□□□□□ -0.57
PDAP1-202ENST00000426447 OVCH2Q7RTZ1 564 aa11.5□□□□□ -0.57
PDAP1-202ENST00000426447 TMEM179BQ7Z7N9 219 aa11.5□□□□□ -0.57
PDAP1-202ENST00000426447 ZNF565Q8N9K5 539 aa11.5□□□□□ -0.57
PDAP1-202ENST00000426447 LRGUKQ96M69 825 aa11.5□□□□□ -0.57
PDAP1-202ENST00000426447 SLC25A19Q9HC21 320 aa11.5□□□□□ -0.57
PDAP1-202ENST00000426447 HMG20AQ9NP66 347 aa11.5□□□□□ -0.57
PDAP1-202ENST00000426447 ARL8BQ9NVJ2 186 aa11.5□□□□□ -0.57
PDAP1-202ENST00000426447 MRM2Q9UI43 246 aaKnown RBP11.5□□□□□ -0.57
PDAP1-202ENST00000426447 EPPK1P58107 5090 aaKnown RBP11.5□□□□□ -0.57
PDAP1-202ENST00000426447 DSCAML1Q8TD84 2053 aa11.5□□□□□ -0.57
PDAP1-202ENST00000426447 RYR2Q92736 4967 aa11.49□□□□□ -0.57
PDAP1-202ENST00000426447 KRT8P05787 483 aa11.49□□□□□ -0.57
PDAP1-202ENST00000426447 PRKACGP22612 351 aa11.49□□□□□ -0.57
PDAP1-202ENST00000426447 FOXE3Q13461 319 aa11.49□□□□□ -0.57
PDAP1-202ENST00000426447 C17orf58Q2M2W7 97 aa11.49□□□□□ -0.57
PDAP1-202ENST00000426447 FAM27D1Q5T7N8 215 aa11.49□□□□□ -0.57
PDAP1-202ENST00000426447 CCDC54Q8NEL0 328 aa11.49□□□□□ -0.57
PDAP1-202ENST00000426447 DNAAF1Q8NEP3 725 aa11.49□□□□□ -0.57
PDAP1-202ENST00000426447 HAVCR2Q8TDQ0 301 aa11.49□□□□□ -0.57
PDAP1-202ENST00000426447 LEAP2Q969E1 77 aa11.49□□□□□ -0.57
PDAP1-202ENST00000426447 KRT84Q9NSB2 600 aa11.49□□□□□ -0.57
PDAP1-202ENST00000426447 CLN6Q9NWW5 311 aa11.49□□□□□ -0.57
PDAP1-202ENST00000426447 OR6C3Q9NZP0 311 aa11.49□□□□□ -0.57
PDAP1-202ENST00000426447 KBTBD11-OT1A0A1B0GTJ5 212 aa11.48□□□□□ -0.57
PDAP1-202ENST00000426447 A0A1W2PPI3 338 aa11.48□□□□□ -0.57
PDAP1-202ENST00000426447 DEGS1O15121 323 aa11.48□□□□□ -0.57
PDAP1-202ENST00000426447 RRP9O43818 475 aaKnown RBP11.48□□□□□ -0.57
PDAP1-202ENST00000426447 ELANEP08246 267 aa11.48□□□□□ -0.57
PDAP1-202ENST00000426447 ANXA8P13928 327 aa11.48□□□□□ -0.57
PDAP1-202ENST00000426447 GPR12P47775 334 aa11.48□□□□□ -0.57
PDAP1-202ENST00000426447 INSL3P51460 131 aa11.48□□□□□ -0.57
PDAP1-202ENST00000426447 PDZK1IP1Q13113 114 aa11.48□□□□□ -0.57
PDAP1-202ENST00000426447 DIAPH2-AS1Q14236 149 aa11.48□□□□□ -0.57
PDAP1-202ENST00000426447 TRIM25Q14258 630 aaKnown RBP11.48□□□□□ -0.57
PDAP1-202ENST00000426447 ATXN7L3Q14CW9 347 aaPredicted RBP11.48□□□□□ -0.57
PDAP1-202ENST00000426447 LTC4SQ16873 150 aa11.48□□□□□ -0.57
PDAP1-202ENST00000426447 HSP90B2PQ58FF3 399 aa11.48□□□□□ -0.57
PDAP1-202ENST00000426447 BCDIN3DQ7Z5W3 292 aaKnown RBP11.48□□□□□ -0.57
PDAP1-202ENST00000426447 MOB3BQ86TA1 216 aa11.48□□□□□ -0.57
PDAP1-202ENST00000426447 CATSPERDQ86XM0 798 aa11.48□□□□□ -0.57
PDAP1-202ENST00000426447 HS3ST5Q8IZT8 346 aa11.48□□□□□ -0.57
PDAP1-202ENST00000426447 OR8H3Q8N146 312 aa11.48□□□□□ -0.57
PDAP1-202ENST00000426447 OR11H1Q8NG94 326 aa11.48□□□□□ -0.57
PDAP1-202ENST00000426447 PP6455Q8WZ26 134 aa11.48□□□□□ -0.57
PDAP1-202ENST00000426447 KIRREL1Q96J84 757 aa11.48□□□□□ -0.57
PDAP1-202ENST00000426447 BIRC6Q9NR09 4857 aa11.47□□□□□ -0.57
PDAP1-202ENST00000426447 CCRL2O00421 344 aa11.47□□□□□ -0.57
PDAP1-202ENST00000426447 PRKYO43930 277 aa11.47□□□□□ -0.57
PDAP1-202ENST00000426447 CSN2P05814 226 aa11.47□□□□□ -0.57
PDAP1-202ENST00000426447 PRKACBP22694 351 aa11.47□□□□□ -0.57
PDAP1-202ENST00000426447 C21orf33P30042 268 aaPredicted RBP11.47□□□□□ -0.57
PDAP1-202ENST00000426447 GNG10P50151 68 aa11.47□□□□□ -0.57
PDAP1-202ENST00000426447 CRISP1P54107 249 aa11.47□□□□□ -0.57
PDAP1-202ENST00000426447 MS4A2Q01362 244 aa11.47□□□□□ -0.57
PDAP1-202ENST00000426447 LHFPL2Q6ZUX7 228 aa11.47□□□□□ -0.57
PDAP1-202ENST00000426447 TGIF2LXQ8IUE1 241 aa11.47□□□□□ -0.57
PDAP1-202ENST00000426447 OR10X1Q8NGY0 326 aa11.47□□□□□ -0.57
PDAP1-202ENST00000426447 C4orf3Q8WVX3 66 aa11.47□□□□□ -0.57
PDAP1-202ENST00000426447 RFT1Q96AA3 541 aa11.47□□□□□ -0.57
PDAP1-202ENST00000426447 C10orf35Q96D05 121 aa11.47□□□□□ -0.57
PDAP1-202ENST00000426447 RNFT2Q96EX2 444 aa11.47□□□□□ -0.57
PDAP1-202ENST00000426447 COQ2Q96H96 371 aa11.47□□□□□ -0.57
PDAP1-202ENST00000426447 TBX5Q99593 518 aa11.47□□□□□ -0.57
PDAP1-202ENST00000426447 ABCG5Q9H222 651 aa11.47□□□□□ -0.57
PDAP1-202ENST00000426447 ADGRL4Q9HBW9 690 aa11.47□□□□□ -0.57
PDAP1-202ENST00000426447 NEK6Q9HC98 313 aa11.47□□□□□ -0.57
PDAP1-202ENST00000426447 LIN7CQ9NUP9 197 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms