RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 RUNX1Q01196 453 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 RHEBQ15382 184 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 FAM209BQ5JX69 171 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 DPPA2Q7Z7J5 298 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 TBC1D26Q86UD7 250 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 DNASE2BQ8WZ79 361 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 TAAR9Q96RI9 348 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 PCED1AQ9H1Q7 454 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 PARPBPQ9NWS1 579 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 EML6Q6ZMW3 1958 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 K7N7A8 449 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 WRBO00258 174 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 HSPA12AO43301 675 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 RPS18P62269 152 aaKnown RBP6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 RAC1P63000 192 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 ZNF674Q2M3X9 581 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 ACER2Q5QJU3 275 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 ZNF343Q6P1L6 599 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 FAM180AQ6UWF9 173 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 Q6ZPA2 131 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 DEFB123Q8N688 67 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 ZNF611Q8N823 705 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 LRTM2Q8N967 370 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 OR4D5Q8NGN0 318 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 NAT6Q93015 286 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 INTS12Q96CB8 462 aaKnown RBP6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 PHF7Q9BWX1 381 aaPredicted RBP6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 PROK2Q9HC23 129 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 TMEM38BQ9NVV0 291 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 FRYLO94915 3013 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 AHCTF1Q8WYP5 2266 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 TRDCB7Z8K6 153 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 ZNF587BE7ETH6 402 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 H0YL77 283 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 H3BP45 60 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 H3BQ15 152 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 SCTP09683 121 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 EPHA1P21709 976 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 DYNLT3P51808 116 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 UCP2P55851 309 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 RND3P61587 244 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 ZNF266Q14584 549 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 TSC22D1Q15714 1073 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 SLC25A24Q6NUK1 477 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 MRPL14Q6P1L8 145 aaKnown RBP6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 FOXL2NBQ6ZUU3 175 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 GAPTQ8N292 157 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 TMEM252Q8N6L7 170 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 CCDC54Q8NEL0 328 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 LFNGQ8NES3 379 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 TMEM171Q8WVE6 324 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 EXTL1Q92935 676 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 NTNG2Q96CW9 530 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 TCEAL7Q9BRU2 100 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 ZNF407Q9C0G0 2248 aa6.49□□□□□ -1.37
SMARCC1-202ENST00000425518 TK1P04183 234 aa6.49□□□□□ -1.37
SMARCC1-202ENST00000425518 CCL2P13500 99 aa6.49□□□□□ -1.37
SMARCC1-202ENST00000425518 RAB1AP62820 205 aa6.49□□□□□ -1.37
SMARCC1-202ENST00000425518 TDHQ8IZJ6 230 aa6.49□□□□□ -1.37
SMARCC1-202ENST00000425518 RAB39BQ96DA2 213 aa6.49□□□□□ -1.37
SMARCC1-202ENST00000425518 FOXB1Q99853 325 aa6.49□□□□□ -1.37
SMARCC1-202ENST00000425518 BCL2L14Q9BZR8 327 aa6.49□□□□□ -1.37
SMARCC1-202ENST00000425518 TMEM222Q9H0R3 208 aa6.49□□□□□ -1.37
SMARCC1-202ENST00000425518 PLEKHF2Q9H8W4 249 aa6.49□□□□□ -1.37
SMARCC1-202ENST00000425518 SEBOXQ9HB31 216 aaPredicted RBP6.49□□□□□ -1.37
SMARCC1-202ENST00000425518 A0A0G2JMM0 328 aa6.49□□□□□ -1.37
SMARCC1-202ENST00000425518 A0A1W2PPB8 328 aa6.49□□□□□ -1.37
SMARCC1-202ENST00000425518 A0A1W2PRS3 328 aa6.49□□□□□ -1.37
SMARCC1-202ENST00000425518 KIR3DP1A8MWS1 328 aa6.49□□□□□ -1.37
SMARCC1-202ENST00000425518 PROB1E7EW31 1015 aa6.49□□□□□ -1.37
SMARCC1-202ENST00000425518 CHST1O43916 411 aa6.49□□□□□ -1.37
SMARCC1-202ENST00000425518 CBR3O75828 277 aa6.49□□□□□ -1.37
SMARCC1-202ENST00000425518 IGHV2-5P01817 119 aa6.49□□□□□ -1.37
SMARCC1-202ENST00000425518 CST2P09228 141 aa6.49□□□□□ -1.37
SMARCC1-202ENST00000425518 CCL4P13236 92 aa6.49□□□□□ -1.37
SMARCC1-202ENST00000425518 S100PP25815 95 aa6.49□□□□□ -1.37
SMARCC1-202ENST00000425518 RBM11P57052 281 aaKnown RBP6.49□□□□□ -1.37
SMARCC1-202ENST00000425518 RAC3P60763 192 aa6.49□□□□□ -1.37
SMARCC1-202ENST00000425518 AKR1C8PQ5T2L2 129 aa6.49□□□□□ -1.37
SMARCC1-202ENST00000425518 TMEM211Q6ICI0 200 aa6.49□□□□□ -1.37
SMARCC1-202ENST00000425518 HS3ST6Q96QI5 342 aa6.49□□□□□ -1.37
SMARCC1-202ENST00000425518 ZMAT5Q9UDW3 170 aaKnown RBP6.49□□□□□ -1.37
SMARCC1-202ENST00000425518 CELSR3Q9NYQ7 3312 aa6.49□□□□□ -1.37
SMARCC1-202ENST00000425518 IGHV1-45A0A0A0MS14 117 aa6.49□□□□□ -1.37
SMARCC1-202ENST00000425518 UMODP07911 640 aa6.49□□□□□ -1.37
SMARCC1-202ENST00000425518 RAB2AP61019 212 aa6.49□□□□□ -1.37
SMARCC1-202ENST00000425518 ZNF154Q13106 437 aa6.49□□□□□ -1.37
SMARCC1-202ENST00000425518 PDZD11Q5EBL8 140 aa6.49□□□□□ -1.37
SMARCC1-202ENST00000425518 ZNF818PQ6ZRF7 136 aa6.49□□□□□ -1.37
SMARCC1-202ENST00000425518 Q6ZSR3 168 aa6.49□□□□□ -1.37
SMARCC1-202ENST00000425518 ZNF429Q86V71 674 aa6.49□□□□□ -1.37
SMARCC1-202ENST00000425518 CYB561D1Q8N8Q1 229 aa6.49□□□□□ -1.37
SMARCC1-202ENST00000425518 CPNE4Q96A23 557 aaPredicted RBP6.49□□□□□ -1.37
SMARCC1-202ENST00000425518 OR2H1Q9GZK4 316 aa6.49□□□□□ -1.37
SMARCC1-202ENST00000425518 SLC25A31Q9H0C2 315 aa6.49□□□□□ -1.37
SMARCC1-202ENST00000425518 WNT5BQ9H1J7 359 aa6.49□□□□□ -1.37
SMARCC1-202ENST00000425518 OR51M1Q9H341 326 aa6.49□□□□□ -1.37
SMARCC1-202ENST00000425518 CCL28Q9NRJ3 127 aa6.49□□□□□ -1.37
SMARCC1-202ENST00000425518 GLRX2Q9NS18 164 aa6.49□□□□□ -1.37
SMARCC1-202ENST00000425518 A0A096LPE4 126 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms