RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 XAF1Q6GPH4 301 aa10.31□□□□□ -0.76
SGCE-203ENST00000425444 Q6ZSV7 163 aa10.31□□□□□ -0.76
SGCE-203ENST00000425444 SATL1Q86VE3 508 aa10.31□□□□□ -0.76
SGCE-203ENST00000425444 C8orf59Q8N0T1 100 aaPredicted RBP10.31□□□□□ -0.76
SGCE-203ENST00000425444 TNFAIP8L1Q8WVP5 186 aa10.31□□□□□ -0.76
SGCE-203ENST00000425444 FOXRED1Q96CU9 486 aaPredicted RBP10.31□□□□□ -0.76
SGCE-203ENST00000425444 SMIM19Q96E16 107 aa10.31□□□□□ -0.76
SGCE-203ENST00000425444 MEGF9Q9H1U4 602 aa10.31□□□□□ -0.76
SGCE-203ENST00000425444 SEBOXQ9HB31 216 aaPredicted RBP10.31□□□□□ -0.76
SGCE-203ENST00000425444 ING3Q9NXR8 418 aa10.31□□□□□ -0.76
SGCE-203ENST00000425444 TBL2Q9Y4P3 447 aaKnown RBP10.31□□□□□ -0.76
SGCE-203ENST00000425444 STAB2Q8WWQ8 2551 aa10.3□□□□□ -0.76
SGCE-203ENST00000425444 DNAH1Q9P2D7 4330 aa10.3□□□□□ -0.76
SGCE-203ENST00000425444 TRGV10A0A0A0MS01 117 aa10.3□□□□□ -0.76
SGCE-203ENST00000425444 ERP29P30040 261 aaKnown RBP10.3□□□□□ -0.76
SGCE-203ENST00000425444 ZP1P60852 638 aa10.3□□□□□ -0.76
SGCE-203ENST00000425444 PPP3R1P63098 170 aa10.3□□□□□ -0.76
SGCE-203ENST00000425444 ADARB1P78563 741 aaKnown RBP10.3□□□□□ -0.76
SGCE-203ENST00000425444 OGFRL1Q5TC84 451 aaPredicted RBP10.3□□□□□ -0.76
SGCE-203ENST00000425444 TCF23Q7RTU1 214 aa10.3□□□□□ -0.76
SGCE-203ENST00000425444 LHFPL4Q7Z7J7 247 aa10.3□□□□□ -0.76
SGCE-203ENST00000425444 OR51A2Q8NGJ7 313 aa10.3□□□□□ -0.76
SGCE-203ENST00000425444 RGP1Q92546 391 aaPredicted RBP10.3□□□□□ -0.76
SGCE-203ENST00000425444 SGCDQ92629 289 aa10.3□□□□□ -0.76
SGCE-203ENST00000425444 TMEM106AQ96A25 262 aa10.3□□□□□ -0.76
SGCE-203ENST00000425444 NR1H4Q96RI1 486 aaPredicted RBP10.3□□□□□ -0.76
SGCE-203ENST00000425444 KRTAP17-1Q9BYP8 105 aa10.3□□□□□ -0.76
SGCE-203ENST00000425444 GAL3ST2Q9H3Q3 398 aa10.3□□□□□ -0.76
SGCE-203ENST00000425444 RAB18Q9NP72 206 aa10.3□□□□□ -0.76
SGCE-203ENST00000425444 ABCB10Q9NRK6 738 aa10.3□□□□□ -0.76
SGCE-203ENST00000425444 BABAM2Q9NXR7 383 aa10.3□□□□□ -0.76
SGCE-203ENST00000425444 CLEC2DQ9UHP7 191 aa10.3□□□□□ -0.76
SGCE-203ENST00000425444 SESN1Q9Y6P5 492 aa10.3□□□□□ -0.76
SGCE-203ENST00000425444 HSPE1-MOB4S4R3N1 261 aa10.3□□□□□ -0.76
SGCE-203ENST00000425444 EFCAB10A6NFE3 127 aa10.29□□□□□ -0.76
SGCE-203ENST00000425444 ODF3BA8MYP8 253 aa10.29□□□□□ -0.76
SGCE-203ENST00000425444 GABRPO00591 440 aa10.29□□□□□ -0.76
SGCE-203ENST00000425444 HSPB6O14558 160 aa10.29□□□□□ -0.76
SGCE-203ENST00000425444 CASQ2O14958 399 aaPredicted RBP10.29□□□□□ -0.76
SGCE-203ENST00000425444 DEGS1O15121 323 aa10.29□□□□□ -0.76
SGCE-203ENST00000425444 MTNR1BP49286 362 aa10.29□□□□□ -0.76
SGCE-203ENST00000425444 AESQ08117 197 aa10.29□□□□□ -0.76
SGCE-203ENST00000425444 ST3GAL4Q11206 333 aa10.29□□□□□ -0.76
SGCE-203ENST00000425444 ATXN7L3Q14CW9 347 aaPredicted RBP10.29□□□□□ -0.76
SGCE-203ENST00000425444 RSU1Q15404 277 aa10.29□□□□□ -0.76
SGCE-203ENST00000425444 AANATQ16613 207 aa10.29□□□□□ -0.76
SGCE-203ENST00000425444 DDI2Q5TDH0 399 aa10.29□□□□□ -0.76
SGCE-203ENST00000425444 ZNF626Q68DY1 528 aa10.29□□□□□ -0.76
SGCE-203ENST00000425444 CRIP3Q6Q6R5 217 aa10.29□□□□□ -0.76
SGCE-203ENST00000425444 CCBE1Q6UXH8 406 aaPredicted RBP10.29□□□□□ -0.76
SGCE-203ENST00000425444 STX19Q8N4C7 294 aa10.29□□□□□ -0.76
SGCE-203ENST00000425444 ZFP41Q8N8Y5 198 aa10.29□□□□□ -0.76
SGCE-203ENST00000425444 CHST4Q8NCG5 386 aa10.29□□□□□ -0.76
SGCE-203ENST00000425444 OR4C13Q8NGP0 309 aa10.29□□□□□ -0.76
SGCE-203ENST00000425444 OR52N1Q8NH53 320 aa10.29□□□□□ -0.76
SGCE-203ENST00000425444 NDNFQ8TB73 568 aa10.29□□□□□ -0.76
SGCE-203ENST00000425444 RPS4Y2Q8TD47 263 aa10.29□□□□□ -0.76
SGCE-203ENST00000425444 GGHQ92820 318 aa10.29□□□□□ -0.76
SGCE-203ENST00000425444 WWC2-AS2Q96NR7 200 aa10.29□□□□□ -0.76
SGCE-203ENST00000425444 TMEM133Q9H2Q1 129 aa10.29□□□□□ -0.76
SGCE-203ENST00000425444 NECAP2Q9NVZ3 263 aa10.29□□□□□ -0.76
SGCE-203ENST00000425444 AURKAIP1Q9NWT8 199 aaPredicted RBP10.29□□□□□ -0.76
SGCE-203ENST00000425444 UBE2J1Q9Y385 318 aaPredicted RBP10.29□□□□□ -0.76
SGCE-203ENST00000425444 PNMA8CA0A1B0GUJ8 204 aa10.28□□□□□ -0.76
SGCE-203ENST00000425444 H0YJX3 145 aa10.28□□□□□ -0.76
SGCE-203ENST00000425444 SLC33A1O00400 549 aaPredicted RBP10.28□□□□□ -0.76
SGCE-203ENST00000425444 MYL12BO14950 172 aa10.28□□□□□ -0.76
SGCE-203ENST00000425444 XPNPEP2O43895 674 aa10.28□□□□□ -0.76
SGCE-203ENST00000425444 LALBAP00709 142 aa10.28□□□□□ -0.76
SGCE-203ENST00000425444 GNAO1P09471 354 aa10.28□□□□□ -0.76
SGCE-203ENST00000425444 GABRA5P31644 462 aa10.28□□□□□ -0.76
SGCE-203ENST00000425444 SSX2Q16385 188 aa10.28□□□□□ -0.76
SGCE-203ENST00000425444 KRBOX4Q5JUW0 171 aa10.28□□□□□ -0.76
SGCE-203ENST00000425444 PRAMEF5Q5TYX0 476 aa10.28□□□□□ -0.76
SGCE-203ENST00000425444 LIAT1Q6ZQX7 453 aa10.28□□□□□ -0.76
SGCE-203ENST00000425444 AHSA2Q719I0 299 aa10.28□□□□□ -0.76
SGCE-203ENST00000425444 PXT1Q8NFP0 134 aa10.28□□□□□ -0.76
SGCE-203ENST00000425444 BPIFB6Q8NFQ5 453 aa10.28□□□□□ -0.76
SGCE-203ENST00000425444 OR11H6Q8NGC7 330 aa10.28□□□□□ -0.76
SGCE-203ENST00000425444 OR13C5Q8NGS8 318 aa10.28□□□□□ -0.76
SGCE-203ENST00000425444 OR10K1Q8NGX5 313 aa10.28□□□□□ -0.76
SGCE-203ENST00000425444 AJUBAQ96IF1 538 aa10.28□□□□□ -0.76
SGCE-203ENST00000425444 S100A13Q99584 98 aa10.28□□□□□ -0.76
SGCE-203ENST00000425444 NKX3-1Q99801 234 aaPredicted RBP10.28□□□□□ -0.76
SGCE-203ENST00000425444 CLEC7AQ9BXN2 247 aa10.28□□□□□ -0.76
SGCE-203ENST00000425444 C16orf95Q9H693 158 aa10.28□□□□□ -0.76
SGCE-203ENST00000425444 CNOT2Q9NZN8 540 aaKnown RBP10.28□□□□□ -0.76
SGCE-203ENST00000425444 CKLFQ9UBR5 152 aa10.28□□□□□ -0.76
SGCE-203ENST00000425444 SIRT4Q9Y6E7 314 aaPredicted RBP10.28□□□□□ -0.76
SGCE-203ENST00000425444 IGHV2-26A0A0B4J1V2 119 aa10.27□□□□□ -0.77
SGCE-203ENST00000425444 ODAMA1E959 279 aa10.27□□□□□ -0.77
SGCE-203ENST00000425444 FAM90A8PA6NJQ4 464 aa10.27□□□□□ -0.77
SGCE-203ENST00000425444 F2RL2O00254 374 aa10.27□□□□□ -0.77
SGCE-203ENST00000425444 OGG1O15527 345 aa10.27□□□□□ -0.77
SGCE-203ENST00000425444 TSPAN9O75954 239 aa10.27□□□□□ -0.77
SGCE-203ENST00000425444 HTR3BO95264 441 aa10.27□□□□□ -0.77
SGCE-203ENST00000425444 CDK2P24941 298 aa10.27□□□□□ -0.77
SGCE-203ENST00000425444 LMO1P25800 156 aa10.27□□□□□ -0.77
SGCE-203ENST00000425444 BDKRB2P30411 391 aa10.27□□□□□ -0.77
SGCE-203ENST00000425444 ZNF93P35789 620 aaPredicted RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms