RNA–Protein interactions for RNA: ENST00000424265.5

USP54-205, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 5,201 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-205ENST00000424265 SRD5A2P31213 254 aa8.62□□□□□ -1.03
USP54-205ENST00000424265 CSNK1A1P48729 337 aa8.62□□□□□ -1.03
USP54-205ENST00000424265 SMAGPQ0VAQ4 97 aa8.62□□□□□ -1.03
USP54-205ENST00000424265 RAB35Q15286 201 aa8.62□□□□□ -1.03
USP54-205ENST00000424265 UNQ5815/PRO19632Q6UWF5 114 aa8.62□□□□□ -1.03
USP54-205ENST00000424265 H1FNTQ75WM6 255 aaPredicted RBP8.62□□□□□ -1.03
USP54-205ENST00000424265 CTHRC1Q96CG8 243 aa8.62□□□□□ -1.03
USP54-205ENST00000424265 B3GALT5Q9Y2C3 310 aa8.62□□□□□ -1.03
USP54-205ENST00000424265 KIR2DL5BA0A0G2JN68 375 aa8.61□□□□□ -1.03
USP54-205ENST00000424265 KIR2DL5BA0A0G2JPC4 375 aa8.61□□□□□ -1.03
USP54-205ENST00000424265 K7EQM0 130 aa8.61□□□□□ -1.03
USP54-205ENST00000424265 TMPRSS3P57727 454 aa8.61□□□□□ -1.03
USP54-205ENST00000424265 PCBD1P61457 104 aa8.61□□□□□ -1.03
USP54-205ENST00000424265 PSG6Q00889 435 aa8.61□□□□□ -1.03
USP54-205ENST00000424265 ZNF92Q03936 586 aa8.61□□□□□ -1.03
USP54-205ENST00000424265 CRMP1Q14194 572 aa8.61□□□□□ -1.03
USP54-205ENST00000424265 ZNF766Q5HY98 468 aa8.61□□□□□ -1.03
USP54-205ENST00000424265 KIR2DL5AQ8N109 375 aa8.61□□□□□ -1.03
USP54-205ENST00000424265 PPP1R14AQ96A00 147 aa8.61□□□□□ -1.03
USP54-205ENST00000424265 SCGB3A2Q96PL1 93 aa8.61□□□□□ -1.03
USP54-205ENST00000424265 RASL10BQ96S79 203 aa8.61□□□□□ -1.03
USP54-205ENST00000424265 IGKV3D-11A0A0A0MRZ8 115 aa8.61□□□□□ -1.03
USP54-205ENST00000424265 CLEC18AA5D8T8 446 aa8.61□□□□□ -1.03
USP54-205ENST00000424265 RAMP1O60894 148 aa8.61□□□□□ -1.03
USP54-205ENST00000424265 SCGB1A1P11684 91 aa8.61□□□□□ -1.03
USP54-205ENST00000424265 CD99P14209 185 aa8.61□□□□□ -1.03
USP54-205ENST00000424265 COL10A1Q03692 680 aa8.61□□□□□ -1.03
USP54-205ENST00000424265 CLEC18CQ8NCF0 446 aa8.61□□□□□ -1.03
USP54-205ENST00000424265 DERL3Q96Q80 235 aa8.61□□□□□ -1.03
USP54-205ENST00000424265 PLK3Q9H4B4 646 aa8.61□□□□□ -1.03
USP54-205ENST00000424265 LSM5Q9Y4Y9 91 aaKnown RBP8.61□□□□□ -1.03
USP54-205ENST00000424265 RAMP3O60896 148 aa8.61□□□□□ -1.03
USP54-205ENST00000424265 PAX2Q02962 417 aa8.61□□□□□ -1.03
USP54-205ENST00000424265 PSMF1Q92530 271 aa8.61□□□□□ -1.03
USP54-205ENST00000424265 SEH1LQ96EE3 360 aa8.61□□□□□ -1.03
USP54-205ENST00000424265 CDX4O14627 284 aaPredicted RBP8.61□□□□□ -1.03
USP54-205ENST00000424265 ONECUT2O95948 504 aa8.61□□□□□ -1.03
USP54-205ENST00000424265 CALCBP10092 127 aa8.61□□□□□ -1.03
USP54-205ENST00000424265 CRYBA4P53673 196 aa8.61□□□□□ -1.03
USP54-205ENST00000424265 HGFACQ04756 655 aa8.61□□□□□ -1.03
USP54-205ENST00000424265 IL24Q13007 206 aa8.61□□□□□ -1.03
USP54-205ENST00000424265 MRPL14Q6P1L8 145 aaKnown RBP8.61□□□□□ -1.03
USP54-205ENST00000424265 TMEM182Q6ZP80 229 aaPredicted RBP8.61□□□□□ -1.03
USP54-205ENST00000424265 OR52E2Q8NGJ4 325 aa8.61□□□□□ -1.03
USP54-205ENST00000424265 FUT9Q9Y231 359 aa8.61□□□□□ -1.03
USP54-205ENST00000424265 TMEM272A0A1B0GTI8 110 aa8.6□□□□□ -1.03
USP54-205ENST00000424265 PLP1P60201 277 aa8.6□□□□□ -1.03
USP54-205ENST00000424265 RAC3P60763 192 aa8.6□□□□□ -1.03
USP54-205ENST00000424265 ADIRFQ15847 76 aa8.6□□□□□ -1.03
USP54-205ENST00000424265 SLC18B1Q6NT16 456 aa8.6□□□□□ -1.03
USP54-205ENST00000424265 TMEM52Q8NDY8 209 aa8.6□□□□□ -1.03
USP54-205ENST00000424265 OR2V1Q8NHB1 315 aa8.6□□□□□ -1.03
USP54-205ENST00000424265 STARD4Q96DR4 205 aa8.6□□□□□ -1.03
USP54-205ENST00000424265 RBKSQ9H477 322 aa8.6□□□□□ -1.03
USP54-205ENST00000424265 SMDT1Q9H4I9 107 aa8.6□□□□□ -1.03
USP54-205ENST00000424265 OR5V1Q9UGF6 321 aa8.6□□□□□ -1.03
USP54-205ENST00000424265 DCDC2BA2VCK2 349 aa8.6□□□□□ -1.03
USP54-205ENST00000424265 FIGNL2A6NMB9 653 aa8.6□□□□□ -1.03
USP54-205ENST00000424265 PPP1R3DO95685 299 aa8.6□□□□□ -1.03
USP54-205ENST00000424265 TMEM267Q0VDI3 215 aaPredicted RBP8.6□□□□□ -1.03
USP54-205ENST00000424265 MFAP5Q13361 173 aa8.6□□□□□ -1.03
USP54-205ENST00000424265 MST1LQ2TV78 715 aa8.6□□□□□ -1.03
USP54-205ENST00000424265 BAGE3Q86Y29 109 aa8.6□□□□□ -1.03
USP54-205ENST00000424265 BAGE2Q86Y30 109 aa8.6□□□□□ -1.03
USP54-205ENST00000424265 SIGLECL1Q8N7X8 197 aa8.6□□□□□ -1.03
USP54-205ENST00000424265 PRSS33Q8NF86 280 aa8.6□□□□□ -1.03
USP54-205ENST00000424265 OR2AE1Q8NHA4 323 aa8.6□□□□□ -1.03
USP54-205ENST00000424265 FAM103A1Q9BTL3 118 aaKnown RBP8.6□□□□□ -1.03
USP54-205ENST00000424265 DNAJB12Q9NXW2 375 aaKnown RBP8.6□□□□□ -1.03
USP54-205ENST00000424265 MTFP1Q9UDX5 166 aa8.6□□□□□ -1.03
USP54-205ENST00000424265 WIPI2Q9Y4P8 454 aa8.6□□□□□ -1.03
USP54-205ENST00000424265 HS3ST3B1Q9Y662 390 aa8.6□□□□□ -1.03
USP54-205ENST00000424265 MUC22E2RYF6 1773 aaPredicted RBP8.6□□□□□ -1.03
USP54-205ENST00000424265 A0A1W2PRS3 328 aa8.6□□□□□ -1.03
USP54-205ENST00000424265 RBFOX3A6NFN3 312 aa8.6□□□□□ -1.03
USP54-205ENST00000424265 CORTO00230 105 aa8.6□□□□□ -1.03
USP54-205ENST00000424265 TTRP02766 147 aa8.6□□□□□ -1.03
USP54-205ENST00000424265 FUT3P21217 361 aa8.6□□□□□ -1.03
USP54-205ENST00000424265 FCGR2CP31995 323 aa8.6□□□□□ -1.03
USP54-205ENST00000424265 PRSS54Q6PEW0 395 aa8.6□□□□□ -1.03
USP54-205ENST00000424265 OR8I2Q8N0Y5 310 aa8.6□□□□□ -1.03
USP54-205ENST00000424265 CHST4Q8NCG5 386 aa8.6□□□□□ -1.03
USP54-205ENST00000424265 C20orf144Q9BQM9 153 aa8.6□□□□□ -1.03
USP54-205ENST00000424265 PDE6DO43924 150 aa8.6□□□□□ -1.03
USP54-205ENST00000424265 HIST3H3Q16695 136 aa8.6□□□□□ -1.03
USP54-205ENST00000424265 IER3IP1Q9Y5U9 82 aa8.6□□□□□ -1.03
USP54-205ENST00000424265 WSB1Q9Y6I7 421 aa8.6□□□□□ -1.03
USP54-205ENST00000424265 LOC102723996A0A087X1L8 192 aa8.59□□□□□ -1.03
USP54-205ENST00000424265 A0A0B4J2E0 115 aa8.59□□□□□ -1.03
USP54-205ENST00000424265 A0A1B0GX12 115 aa8.59□□□□□ -1.03
USP54-205ENST00000424265 MAP1LC3B2A6NCE7 125 aa8.59□□□□□ -1.03
USP54-205ENST00000424265 C9JQL5 133 aa8.59□□□□□ -1.03
USP54-205ENST00000424265 DNPH1O43598 174 aa8.59□□□□□ -1.03
USP54-205ENST00000424265 SRMP19623 302 aa8.59□□□□□ -1.03
USP54-205ENST00000424265 RPL12P30050 165 aaKnown RBP8.59□□□□□ -1.03
USP54-205ENST00000424265 UBE2NP61088 152 aaKnown RBP8.59□□□□□ -1.03
USP54-205ENST00000424265 CDCP2Q5VXM1 449 aa8.59□□□□□ -1.03
USP54-205ENST00000424265 OR4X1Q8NH49 305 aa8.59□□□□□ -1.03
USP54-205ENST00000424265 MAP1LC3BQ9GZQ8 125 aa8.59□□□□□ -1.03
USP54-205ENST00000424265 SLC5A7Q9GZV3 580 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms