RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 C18orf12Q96KH6 178 aa12.41□□□□□ -0.42
MSH5-206ENST00000423982 TP53RKQ96S44 253 aa12.41□□□□□ -0.42
MSH5-206ENST00000423982 PBDC1Q9BVG4 233 aa12.41□□□□□ -0.42
MSH5-206ENST00000423982 NELFAQ9H3P2 528 aa12.41□□□□□ -0.42
MSH5-206ENST00000423982 DECR2Q9NUI1 292 aa12.41□□□□□ -0.42
MSH5-206ENST00000423982 PARPBPQ9NWS1 579 aa12.41□□□□□ -0.42
MSH5-206ENST00000423982 GEMIN2O14893 280 aaKnown RBP12.41□□□□□ -0.42
MSH5-206ENST00000423982 ST8SIA3O43173 380 aa12.41□□□□□ -0.42
MSH5-206ENST00000423982 IGLV3-1P01715 115 aa12.41□□□□□ -0.42
MSH5-206ENST00000423982 ATP6V0CP27449 155 aa12.41□□□□□ -0.42
MSH5-206ENST00000423982 TAGLN2P37802 199 aaKnown RBP12.41□□□□□ -0.42
MSH5-206ENST00000423982 RAB5CP51148 216 aa12.41□□□□□ -0.42
MSH5-206ENST00000423982 RND3P61587 244 aa12.41□□□□□ -0.42
MSH5-206ENST00000423982 RUNX1Q01196 453 aa12.41□□□□□ -0.42
MSH5-206ENST00000423982 PRAMEF20Q5VT98 475 aa12.41□□□□□ -0.42
MSH5-206ENST00000423982 LIAT1Q6ZQX7 453 aa12.41□□□□□ -0.42
MSH5-206ENST00000423982 HIST2H3AQ71DI3 136 aa12.41□□□□□ -0.42
MSH5-206ENST00000423982 ANKRD37Q7Z713 158 aa12.41□□□□□ -0.42
MSH5-206ENST00000423982 KDF1Q8NAX2 398 aaPredicted RBP12.41□□□□□ -0.42
MSH5-206ENST00000423982 TMEM171Q8WVE6 324 aa12.41□□□□□ -0.42
MSH5-206ENST00000423982 NTNG2Q96CW9 530 aa12.41□□□□□ -0.42
MSH5-206ENST00000423982 METTL7AQ9H8H3 244 aa12.41□□□□□ -0.42
MSH5-206ENST00000423982 DMRT1Q9Y5R6 373 aa12.41□□□□□ -0.42
MSH5-206ENST00000423982 IGSF23A1L1A6 192 aa12.4□□□□□ -0.42
MSH5-206ENST00000423982 NKX2-6A6NCS4 301 aa12.4□□□□□ -0.42
MSH5-206ENST00000423982 ZNF724A8MTY0 619 aa12.4□□□□□ -0.42
MSH5-206ENST00000423982 B4E171 279 aa12.4□□□□□ -0.42
MSH5-206ENST00000423982 OR2J2O76002 312 aa12.4□□□□□ -0.42
MSH5-206ENST00000423982 SLC34A2O95436 690 aa12.4□□□□□ -0.42
MSH5-206ENST00000423982 CELA2AP08217 269 aa12.4□□□□□ -0.42
MSH5-206ENST00000423982 TSPAN7P41732 249 aa12.4□□□□□ -0.42
MSH5-206ENST00000423982 GRB2P62993 217 aaKnown RBP12.4□□□□□ -0.42
MSH5-206ENST00000423982 NHLH1Q02575 133 aa12.4□□□□□ -0.42
MSH5-206ENST00000423982 ENDOGQ14249 297 aaKnown RBP12.4□□□□□ -0.42
MSH5-206ENST00000423982 P4HA3Q7Z4N8 544 aa12.4□□□□□ -0.42
MSH5-206ENST00000423982 NFAM1Q8NET5 270 aaPredicted RBP12.4□□□□□ -0.42
MSH5-206ENST00000423982 OR10D4PQ8NGN7 298 aa12.4□□□□□ -0.42
MSH5-206ENST00000423982 ZNF700Q9H0M5 742 aa12.4□□□□□ -0.42
MSH5-206ENST00000423982 NECAP2Q9NVZ3 263 aa12.4□□□□□ -0.42
MSH5-206ENST00000423982 HSF4Q9ULV5 492 aa12.4□□□□□ -0.42
MSH5-206ENST00000423982 V9GYS6 101 aa12.4□□□□□ -0.42
MSH5-206ENST00000423982 RBFOX3A6NFN3 312 aa12.4□□□□□ -0.42
MSH5-206ENST00000423982 ZNF729A6NN14 1252 aaPredicted RBP12.4□□□□□ -0.42
MSH5-206ENST00000423982 SUCLG1P53597 346 aaKnown RBP12.4□□□□□ -0.42
MSH5-206ENST00000423982 ELOBQ15370 118 aa12.4□□□□□ -0.42
MSH5-206ENST00000423982 HIST3H3Q16695 136 aa12.4□□□□□ -0.42
MSH5-206ENST00000423982 MRPL14Q6P1L8 145 aaKnown RBP12.4□□□□□ -0.42
MSH5-206ENST00000423982 UNQ6494/PRO21346Q6UXR6 183 aa12.4□□□□□ -0.42
MSH5-206ENST00000423982 CYB561D1Q8N8Q1 229 aa12.4□□□□□ -0.42
MSH5-206ENST00000423982 BOD1Q96IK1 185 aa12.4□□□□□ -0.42
MSH5-206ENST00000423982 MRGPRX4Q96LA9 322 aa12.4□□□□□ -0.42
MSH5-206ENST00000423982 ZNF385AQ96PM9 386 aaKnown RBP12.4□□□□□ -0.42
MSH5-206ENST00000423982 IGLV3-12A0A075B6K2 115 aa12.39□□□□□ -0.43
MSH5-206ENST00000423982 CST7O76096 145 aa12.39□□□□□ -0.43
MSH5-206ENST00000423982 EPHA1P21709 976 aa12.39□□□□□ -0.43
MSH5-206ENST00000423982 DUSP1P28562 367 aa12.39□□□□□ -0.43
MSH5-206ENST00000423982 OTX2P32243 289 aa12.39□□□□□ -0.43
MSH5-206ENST00000423982 CDX1P47902 265 aaPredicted RBP12.39□□□□□ -0.43
MSH5-206ENST00000423982 RSU1Q15404 277 aa12.39□□□□□ -0.43
MSH5-206ENST00000423982 TMEM217Q8N7C4 229 aa12.39□□□□□ -0.43
MSH5-206ENST00000423982 OXGR1Q96P68 337 aa12.39□□□□□ -0.43
MSH5-206ENST00000423982 RBM24Q9BX46 236 aaKnown RBP12.39□□□□□ -0.43
MSH5-206ENST00000423982 GPR61Q9BZJ8 451 aa12.39□□□□□ -0.43
MSH5-206ENST00000423982 TGIF2Q9GZN2 237 aa12.39□□□□□ -0.43
MSH5-206ENST00000423982 STRAPQ9Y3F4 350 aaKnown RBP12.39□□□□□ -0.43
MSH5-206ENST00000423982 URB1O60287 2271 aaKnown RBP12.39□□□□□ -0.43
MSH5-206ENST00000423982 HSD17B6O14756 317 aa12.39□□□□□ -0.43
MSH5-206ENST00000423982 KLF7O75840 302 aaPredicted RBP12.39□□□□□ -0.43
MSH5-206ENST00000423982 UMODP07911 640 aa12.39□□□□□ -0.43
MSH5-206ENST00000423982 SOD3P08294 240 aa12.39□□□□□ -0.43
MSH5-206ENST00000423982 UBE2KP61086 200 aa12.39□□□□□ -0.43
MSH5-206ENST00000423982 DLK1P80370 383 aa12.39□□□□□ -0.43
MSH5-206ENST00000423982 TMEM164Q5U3C3 297 aa12.39□□□□□ -0.43
MSH5-206ENST00000423982 GPR157Q5UAW9 335 aa12.39□□□□□ -0.43
MSH5-206ENST00000423982 C6orf15Q6UXA7 325 aaPredicted RBP12.39□□□□□ -0.43
MSH5-206ENST00000423982 C1QL4Q86Z23 238 aa12.39□□□□□ -0.43
MSH5-206ENST00000423982 GALNT14Q96FL9 552 aa12.39□□□□□ -0.43
MSH5-206ENST00000423982 CXorf65A6NEN9 183 aa12.39□□□□□ -0.43
MSH5-206ENST00000423982 M0R135 149 aa12.39□□□□□ -0.43
MSH5-206ENST00000423982 GATCO43716 136 aaKnown RBP12.39□□□□□ -0.43
MSH5-206ENST00000423982 HIST1H2BKO60814 126 aa12.39□□□□□ -0.43
MSH5-206ENST00000423982 HIST1H2BJP06899 126 aa12.39□□□□□ -0.43
MSH5-206ENST00000423982 HIST1H2BOP23527 126 aa12.39□□□□□ -0.43
MSH5-206ENST00000423982 HIST1H2BBP33778 126 aa12.39□□□□□ -0.43
MSH5-206ENST00000423982 HIST1H2BDP58876 126 aa12.39□□□□□ -0.43
MSH5-206ENST00000423982 HIST1H2BCP62807 126 aa12.39□□□□□ -0.43
MSH5-206ENST00000423982 RAB1AP62820 205 aa12.39□□□□□ -0.43
MSH5-206ENST00000423982 HIST2H2BEQ16778 126 aa12.39□□□□□ -0.43
MSH5-206ENST00000423982 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.39□□□□□ -0.43
MSH5-206ENST00000423982 OR10AD1Q8NGE0 317 aa12.39□□□□□ -0.43
MSH5-206ENST00000423982 CT55Q8WUE5 264 aa12.39□□□□□ -0.43
MSH5-206ENST00000423982 HIST1H2BHQ93079 126 aa12.39□□□□□ -0.43
MSH5-206ENST00000423982 ZNF799Q96GE5 643 aa12.39□□□□□ -0.43
MSH5-206ENST00000423982 UCN2Q96RP3 112 aa12.39□□□□□ -0.43
MSH5-206ENST00000423982 HIST1H2BNQ99877 126 aa12.39□□□□□ -0.43
MSH5-206ENST00000423982 HIST1H2BMQ99879 126 aa12.39□□□□□ -0.43
MSH5-206ENST00000423982 GAR1Q9NY12 217 aaKnown RBP12.39□□□□□ -0.43
MSH5-206ENST00000423982 PLEK2Q9NYT0 353 aa12.39□□□□□ -0.43
MSH5-206ENST00000423982 IGKV1-12A0A0C4DH73 117 aa12.38□□□□□ -0.43
MSH5-206ENST00000423982 WRBO00258 174 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms