RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 SEC22CQ9BRL7 303 aa3.05□□□□□ -1.92
TOP2A-201ENST00000423485 NUAK2Q9H093 628 aa3.05□□□□□ -1.92
TOP2A-201ENST00000423485 BCL2L10Q9HD36 194 aa3.05□□□□□ -1.92
TOP2A-201ENST00000423485 C19orf12Q9NSK7 152 aa3.05□□□□□ -1.92
TOP2A-201ENST00000423485 ERVK13-1Q9NX77 482 aa3.05□□□□□ -1.92
TOP2A-201ENST00000423485 RAP2CQ9Y3L5 183 aa3.05□□□□□ -1.92
TOP2A-201ENST00000423485 RAB27BO00194 218 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 ZIC3O60481 467 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 UPK1BO75841 260 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 HRASP01112 189 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 TK1P04183 234 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 S100A9P06702 114 aaKnown RBP3.04□□□□□ -1.92
TOP2A-201ENST00000423485 GTF2F2P13984 249 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 GP9P14770 177 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 ERVFC1-1P60608 527 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 SRSF6Q13247 344 aaKnown RBP3.04□□□□□ -1.92
TOP2A-201ENST00000423485 LHFPL2Q6ZUX7 228 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 SERPINA11Q86U17 422 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 SLC24A4Q8NFF2 622 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 STXBP6Q8NFX7 210 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 OR4K5Q8NGD3 323 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 OR1F12Q8NHA8 337 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 SCGB1C1Q8TD33 95 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 BLNKQ8WV28 456 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 ITLN1Q8WWA0 313 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 TMPRSS13Q9BYE2 586 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 IKZF5Q9H5V7 419 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 FAM206AQ9NX38 181 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 DPM3Q9P2X0 92 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 EMCNQ9ULC0 261 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 TBC1D24Q9ULP9 559 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 RCE1Q9Y256 329 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 RNF11Q9Y3C5 154 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 CBY1Q9Y3M2 126 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 ADAMTS20P59510 1910 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 TRAV3A0A0B4J244 114 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 UBE2QL1A1L167 161 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 A6NJY4 79 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 OR5B21A6NL26 309 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 CD300LBA8K4G0 201 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 TNFRSF11BO00300 401 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 PROCP04070 461 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 CLPSP04118 112 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 KITLGP21583 273 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 SDHAP31040 664 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 ZNF93P35789 620 aaPredicted RBP3.04□□□□□ -1.92
TOP2A-201ENST00000423485 LUMP51884 338 aaPredicted RBP3.04□□□□□ -1.92
TOP2A-201ENST00000423485 SPOCK1Q08629 439 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 MFSD12Q6NUT3 480 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 TCTEX1D1Q8N7M0 179 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 CLEC18CQ8NCF0 446 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 OR4B1Q8NGF8 309 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 OR8H1Q8NGG4 311 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 C16orf52Q8NHV5 167 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 Q8WTZ3 238 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 MUL1Q969V5 352 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 PDLIM5Q96HC4 596 aaKnown RBP3.04□□□□□ -1.92
TOP2A-201ENST00000423485 AAMDCQ9H7C9 122 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 EMC7Q9NPA0 242 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 TVP23BQ9NYZ1 205 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 NDUFAF4Q9P032 175 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 DTX4Q9Y2E6 619 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 MPC1Q9Y5U8 109 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 MEGF11A6BM72 1044 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 C17orf100A8MU93 164 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 EFEMP2O95967 443 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 ZNF688P0C7X2 276 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 MC5RP33032 325 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 CEACAM6P40199 344 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 POLR2JP52435 117 aaKnown RBP3.04□□□□□ -1.92
TOP2A-201ENST00000423485 UCP2P55851 309 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 PSMA6P60900 246 aaKnown RBP3.04□□□□□ -1.92
TOP2A-201ENST00000423485 AKR1C1Q04828 323 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 ZNF154Q13106 437 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 ELFN2Q5R3F8 820 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 TSPO2Q5TGU0 170 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 COMMD6Q7Z4G1 85 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 THNSL2Q86YJ6 484 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 KLHDC8BQ8IXV7 354 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 LYG1Q8N1E2 194 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 C9orf106Q8NAJ2 232 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 TNRC6AQ8NDV7 1962 aaKnown RBP3.04□□□□□ -1.92
TOP2A-201ENST00000423485 OR51L1Q8NGJ5 315 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 TWIST2Q8WVJ9 160 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 INTS14Q96SY0 518 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 ZNF225Q9UK10 706 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 WSB1Q9Y6I7 421 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 ANKHD1Q8IWZ3 2542 aaKnown RBP3.04□□□□□ -1.92
TOP2A-201ENST00000423485 LINC00854A0A1B0GVQ3 168 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 OOEPA6NGQ2 149 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 F8W735 103 aaPredicted RBP3.04□□□□□ -1.92
TOP2A-201ENST00000423485 NPFFO15130 113 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 ARPC3O15145 178 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 GMDSO60547 372 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 SLC22A5O76082 557 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 IFNA7P01567 189 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 MT-ND2P03891 347 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 FABP3P05413 133 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 CDKN2BP42772 138 aa3.04□□□□□ -1.92
TOP2A-201ENST00000423485 GDF5P43026 501 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms